| Entry |
|
|---|
| Symbol |
SMARCD1
|
|---|
| Name |
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
|
|---|
| KO |
| K11650 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D |
|
|---|
| Organism |
oga Otolemur garnettii (small-eared galago)
|
|---|
| Pathway |
| oga03082 | ATP-dependent chromatin remodeling |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:oga00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100945463 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100945463 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100945463 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:oga03021]
100945463 (SMARCD1)
03036 Chromosome and associated proteins [BR:oga03036]
100945463 (SMARCD1)
Transcription machinery [BR:oga03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100945463 (SMARCD1)
Chromosome and associated proteins [BR:oga03036]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100945463 (SMARCD1)
PBAF complex
100945463 (SMARCD1)
GBAF(ncBAF) complex
100945463 (SMARCD1)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
Unknown
|
|---|
| AA seq |
586 aa
MVSPLPDREGGREWPQAFSASRPPLAHSLDALSLPRRPAGRANRRALGGRLGGGGSSGSG
SLCSCSGGSGKMAARAGFQSVAPSGGAGAAGGAGAAAALGPGGTPGPPVRMGPAPGQGLY
RSPMPGAAYPRPGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQ
QVQQQAVQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQ
EALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQ
KRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLD
YQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFES
QRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLL
STASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDV
VGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT |
|---|
| NT seq |
1761 nt +upstreamnt +downstreamnt
atggtttcccccctcccggaccgtgaaggcgggagggagtggccccaggccttttccgct
agtcgcccccctctagctcacagtctcgatgccctgagcctcccgcgccggccggctggc
cgggcgaacaggcgggcgcttggggggcgtttgggaggcggggggagttccggttccggt
tctttgtgcagctgcagcggcggctccgggaagatggcggcccgggcgggtttccagtct
gtggctcccagcggcggcgccggagccgctggaggagcgggcgcggcagccgcacttggc
ccgggcggaactccggggcctccggtgcgaatgggcccggcgccgggtcaagggctgtac
cgctccccgatgcccggagcggcctatccgagaccaggtatgcttccgggcagccgaatg
acacctcagggaccttccatgggaccccctggctatggggggaacccttcagtccgacct
ggcctggcccagtcagggatggaccaatcccgcaagagacctgcacctcagcagatccag
caggtccagcagcaggcagtgcaaaatcgaaatcacaatgcaaagaaaaagaagatggct
gacaaaattctacctcaaaggattcgtgaactggtaccagaatcccaggcctatatggat
ctcttggcttttgaaaggaaactggaccagactatcatgaggaaacggctagatatccag
gaggccttgaaacgtcccatcaagcaaaaacggaagctgcgaattttcatttctaacact
ttcaatccggctaagtcagatgccgaggatggggaagggacggtggcttcctgggagctt
cgggtagaaggacggctcctggaggattcagccttgtccaaatatgatgccaccaaacaa
aagaggaaattctcttccttttttaagtccttggtgattgaactggacaaagacctgtat
gggccagacaaccatctggtagaatggcacaggaccgccactacccaggagactgatggc
ttccaggtgaagcggccaggagatgtgaatgtacggtgtactgttctactgatgctggat
taccagcctccccagtttaaattagaccctcgcctggctcggctcctgggcatccacacc
cagactcgtcccgtgatcattcaagcactgtggcaatatattaagacacataagctccag
gaccctcatgagcgggaatttgtcatctgtgacaaatacctccagcagatctttgaatct
caacgtatgaagttttcagagatccctcaacgactccatgccttgcttatgccaccagaa
cctatcatcattaatcatgtcatcagtgtcgatccaaatgatcagaaaaaaacagcttgt
tatgacattgatgtggaagtggatgacaccttgaagacccagatgaattcttttctcctg
tccactgccagccaacaggagattgctactctggataacaagatccacgagacgatagaa
actatcaaccaactgaagacacagcgagaattcatgctgagctttgccagagaccctcag
ggtttcatcaatgactggcttcagtcccagtgccgcgacctcaagacaatgactgatgtg
gtgggtaacccagaggaagagcgccgagctgagttctacttccagccttgggctcaggag
gccgtatgccgatacttctactccaaggtgcagcagagacgacaagaattagagcaagcc
ctgggaatccggaatacatag |
|---|
