Otolemur garnettii (small-eared galago): 100945624
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Entry
100945624 CDS
T07855
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X2
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
oga
Otolemur garnettii (small-eared galago)
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oga04131
]
100945624 (VPS13A)
Membrane trafficking [BR:
oga04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
100945624 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
Motif
Other DBs
NCBI-GeneID:
100945624
NCBI-ProteinID:
XP_003783011
Ensembl:
ENSOGAG00000009206
LinkDB
All DBs
Position
Unknown
AA seq
3088 aa
AA seq
DB search
MVFESLAVDVLNRILGDYVVDLDTSQLSLGIWKGAVALKNLQIKENALSQLDVPFKVKVG
HIGHLKLTIPWKNLYTQPVEAVLEEIYLLIVPSARIKYDPVKEEKQLMEAKQQELKRIEE
AKQKAVDQDQPQEEKQDTLAEKLVTQIIKNLQVKISSIHIRYEDDITNRDKPLSFGISLQ
NLSMQTTDQYWVPFVHDGTEKLVRKLIRLDNLFAYWNVRSRMFYLNDYDESLDNLRKGIV
SESLVPQGYDFVFRPISATAKLQMKHRADYDFSDPKINLDVELHNIAVEFNKPQYFSVME
LLESIELMTQNLPYRKFKPDVSLHYHAREWWAYAIHGILEVDVSPRLRMWSWKHIREHRQ
KMKQYKELYKKKLTSKKPSAEILMSLEELERTLDVFNITIARQQAEVEVKKAGHKIYKEG
IKDPEDNQGWFTWLWSWSEQKTDDIQPDVKPGTLEEMLTPAEKALLYEAIGYSETAVDPT
LPKTYEAVKFFVHLKSMSVVLRENREKPELLAIVIEEFSTLIVQRPGAQAIKLETKIDSF
HITGLPDNSEKPRLLSSLDDAISLFQITFEINPLDETADQRCIIEAEPLEIIYDARTVNS
IIDFFRPPKEVHISQITSATLTKLEEFRYKTATGLLYIIETQKILDLKINLKASYIIVPQ
NGTFSLTSNLLLLDLGHLKVTSKSRSELPYMKQGGANREEIMHRAYDYFDVQLTSIQLLY
STVGDNWKEARKLNVSKQHILVPMHVNVELSKAMVFMDIKMPKFKIYGKLPLISLRISDK
KLQGIMELVDSIPKPEPVLEVYAPARPSQIQTSASLGASQFSQKLLPVLELTSVSEDDSE
EEFFDAPSSPLEESLQFPARVKSNRPKKLQKQDFSVNMTTLKIRFEVPEVLLQCCHLVGE
YDLPVVEINVLGLGTEIDIRTYDLRAHAFLKEFCLKCPEYSDENKKPVYLVTTLDNTMED
LLTLDYVRAEKNVPNFKNIYNNVLQLIKVNFSSLDIHLHTEALLNTINYFNNILPQSEEE
LSSVNATETEDKGDVIKKLALKLSTTEDIITLQILAELSCLQIFIQDQKRNISEIKIEGL
DSEVIMKPSVTEINAKLRNIIVLDSDKTAVYKKAVYITGKEVFSLKMISYVDATAGPAYT
DMNAVDIQVNLTVGCIEVVFVTKFLYSILAFIDNFQAAKEALAEATVQAAGMAATGVKEL
AQRSSRLALDINIKAPVVVIPQSPVSENVFVADFGLITMTNTFHMVTESQSNPPPIIDLI
TIKLSEMRLYRSQFINDTYQEVLDLLLPLNLEVIVERNLSWEWYQEIPCFNINAQLKPME
FILSQEDITTIFKTLYGNIWYEEGGSASPAVIKDQSNVTSVTNAASHSGGATVVTAAVVE
VHSRASQVKTTLNISFRTDYLTMILYSPDPRQASFTDVRDPALKLAEFKLENIISTAKMH
TDDSTFCSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDVKYRKVREGCVTDAVF
QEMYICASVEFLMTVANVFFEAYTMGTTVETTVQTWTSKEEAPMEESDKWEINIFIKNPE
IVFVADMTKNDAPSLVITTQCEICYKADLKNSTITAAIKDLQVTACPFLPVKRKGKITTV
LQPCDLFYEITQIDTNPQVIEVSVKSLTLKVSPVIINTMITITSALYATKETVPKETASS
TVHLWEKKDTKNLKMWFLEESNESEKIVPATELVPSGETIKMNIDSIFIVLEAGIGHRTV
PMLLAKSRFSGEGKNWSSLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNL
GIKIKKKAKKTLVESETEEENYKVPEYKTVISFYSKDQLNITLSKCGLVMLNNLVKAFTE
AATGSKAVFIRDLAPFIIFNSLGLNISVSPSDSFSILNVPVAKSYMLKNGESLSMDYVRT
KDNDHFNAMTSLSSKLFFILLTPVNHSTADKIPLTKVGRRLYSVRHRESGVERSIVCQID
TVEGSKKITVRSPVQIRNHFSVPFYVYEGGTLLGTASPENEFNVPLPSYRSFLFLKPEDK
DYQISEAIDFEEIRKNEGALLKKKCRSLDPSKKSFLINIVPEKDNLTSLSVYSEDGWDLP
YIIHLWPPILLRNLLPYKIAYYIQGIENLVFTLHEGHSAQICAAQLDKARLHLKLLGYLN
HDWKSEYHITPNLQDITFINFTCVTEIEKTDLDIAVHMTYNTGQTVVAFHSPYWMVNKTG
RMLQYKADGIHRKHPPDYKRPVLFSFQPNNFFNNNKVQLMVTDSELSDQFSIDTVGSHGA
VKCKGLKMEYQVGVTIDLSSFNITRIVTFTPFYMIKNKSKYQISVAEEGSNKWHFLDLEQ
CIPFWPEYTSGKLLIKVERSGDPPKRIYFNKQENCILLRLDNELGGIIAEVNLAEHSTVI
TFSDYHDGAATFLLINHTRNDLVQYMQSSLSEIEDSLPPGKAVFYTWADPVGSRKLKWKC
GKSQGEVTQKDDMMTPIDLGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAEQ
EIVLALQDVGISLVNNYTKQEVAYIGITSSDIVWETKPKKKARWKPMSVKHTEKLEKEFK
EYTESSPSDDKIIELDNSIPVRFTPSGNNMKILLPNMIALRRNYLPALNVEYSTSAHQSS
FRIQIYRIQIQNQIHGAIFPFVFYPIKPPKSVTMDSAPKPFTDVSIVMRSAGHSHISRIK
YFKVLIQEMDLRLDLGFVYALADLMTEAEVTEKTEVDLFHKDVEAFEEEYKTVSFEDQSQ
VSLYEYFHISPIKLHLSVSLSSGREEAKDSHKDEGLIPVHSLNLLLKSIGATLTDVQDVV
FKLAFFELNYQFHTTSELQSEVVRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEA
FFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVAAITMDEDYQ
QKRREAMNKQPAGFREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGL
VGAVARPTGGIIDMASSTFQGIKRATETFEVESLRPPRFFNEDGVIRPYRLRDGTGNQML
QKIQFYREWNMTHDSSSDDDDDESDLKS
NT seq
9267 nt
NT seq
+upstream
nt +downstream
nt
atggtattcgagtcgctggccgtggacgtgttgaaccggatcttgggggactatgtggtg
gacctggacacatcccagctgtctctgggcatctggaaaggagctgtggccctcaagaat
cttcaaattaaagaaaatgccctgagtcaactggatgtaccatttaaagttaaagttggc
catataggtcatcttaaacttacaattccatggaaaaacctttatactcaaccagttgaa
gctgtattggaagaaatttatttactcatagtgccttctgctagaataaaatatgatcct
gtaaaagaagaaaaacaactcatggaagcaaagcaacaggaactaaaaaggatagaagaa
gcaaaacaaaaagcagttgaccaagaccaacctcaggaggagaagcaggatactttggca
gaaaaattagttactcagatcataaaaaatcttcaagtgaaaatttccagcatccatatt
cgatatgaagatgatattactaatcgagacaaaccactgtcatttggtatttcccttcaa
aatctcagtatgcagacaactgatcaatactgggttccgtttgtacatgatggaactgag
aaactagttcgtaagttaatccgattggataacctttttgcctattggaatgtgaggtct
cggatgttttatcttaatgattatgatgaatcattggataacttgaggaaaggcattgtc
agtgaaagtcttgttccacaaggttatgattttgtatttcgccccatatctgctactgcc
aaactgcagatgaagcaccgagcagattatgacttttctgaccccaaaataaacctggat
gttgaattacataacatagcagttgaatttaataaaccacagtatttcagtgtcatggag
cttcttgaatcaattgagttgatgacacaaaatctgccatataggaaattcaaacctgat
gtgtctcttcactaccatgccagggaatggtgggcctatgctatacatggtattcttgaa
gtagatgtttctcccagattacggatgtggtcatggaagcatattcgtgaacataggcaa
aaaatgaagcaatataaagaactgtataaaaaaaagttaacaagtaagaagccatctgct
gaaattctcatgtctttggaggagttggaaagaactctggatgtctttaacataactata
gcgagacaacaggcagaagttgaggtaaagaaagctggacacaagatttataaagaaggg
ataaaagatccagaggataatcaaggatggttcacttggctgtggtcttggtcagaacaa
aagactgatgatatacaaccagatgttaaacctggaactctcgaagaaatgttgacacct
gcagaaaaagctttactgtatgaagcaattggctatagtgaaacagcagttgatccaact
ttgccaaaaacatatgaagccgtgaaattttttgttcacttgaaaagcatgtctgtggtt
ctaagagaaaatcgtgaaaaacccgagctgttagctattgttatagaagaatttagcact
ttgattgttcaaagaccaggagcacaagcaataaaattagaaaccaaaatagattcattt
catattactggcttaccagataattcagaaaaaccccgcctcctgtcttcattggatgat
gcgatttcactcttccaaattacatttgagataaatcctctagatgaaactgctgatcaa
aggtgtatcatagaagctgaaccgttagaaattatatatgatgcaaggacagtgaatagt
ataatagatttcttcagacctccaaaggaggtgcatatatcacagattacttcagcgact
ttgacaaaacttgaagaatttcggtataagacagcaacaggtctactgtatattattgaa
acacagaaaattcttgatctcaaaattaatttgaaggcatcatatattattgtcccacaa
aatggaacttttagccttacatcaaatctgcttcttttggatcttggtcatctaaaggtg
acaagtaaaagtcgttcagaattgccgtatatgaagcaaggtggggctaatcgtgaagaa
ataatgcatagagcttatgattactttgatgttcagcttacaagcatacagctgctttac
agtacagttggtgataattggaaagaagcacgaaaactgaatgtatctaagcaacatatt
ttggtacccatgcatgtcaatgtggaactctctaaggctatggttttcatggacataaag
atgcccaaattcaagatttatggaaagttacctcttatttctttacggatctcggataaa
aaattacaagggattatggaattggttgatagcattccaaaacctgagcctgtactggaa
gtatatgcccctgccaggccatcacagattcaaacatctgcttctttgggagcatcacag
ttttcacagaaactattgcctgtcttggaacttacttctgtttctgaagatgactcagag
gaggaattttttgatgcaccaagtagtcccttggaagagtctcttcaatttccagctaga
gttaaaagtaatcgtccgaaaaagttacaaaagcaagatttttcagtaaatatgactaca
cttaaaatacgatttgaagtaccagaggttttgcttcagtgttgtcatcttgtaggagaa
tatgacttaccagtcgtagaaattaatgttttaggattgggtacggaaattgacattaga
acatacgatttgagagctcacgcatttttgaaagagttctgcttaaaatgcccagaatac
tcggatgaaaacaagaaaccagtttatttggtcacaacactggataacacaatggaagat
ctgttaacactcgactatgtgagggctgaaaagaatgtacccaacttcaaaaatatttat
aataatgttttacagctgattaaggtgaatttttcctctttggatatccatttacacact
gaagcacttctgaatacaataaattattttaataatattcttccacaatcagaggaagaa
ttatcctcagtgaatgctacagagactgaagacaaaggagacgtcattaaaaaattagct
ttaaaactatccacgactgaagatatcattaccttgcagattttagcagaattatcatgt
ttacagatttttattcaagatcagaaacgtaacatttctgaaattaagattgaaggactt
gattctgaggtaattatgaagccttcagtaactgaaataaatgcaaagctaaggaatata
attgttttggattctgataaaacagctgtttataaaaaggcagtttatatcactggaaaa
gaagttttcagcttgaaaatgatttcttatgtggatgcaactgctggtcctgcatacaca
gatatgaatgcagttgacattcaggttaatttaacagttggttgcattgaagtagtgttt
gtcacaaaatttctatattctatattggcttttatagataattttcaagcagctaaagaa
gcccttgccgaggcaactgttcaggcagcaggaatggctgctactggtgtaaaagaactg
gcacaaagaagttccagattggcattggatattaatatcaaagccccagttgtggtcatc
ccacagtctccagtttctgaaaatgtttttgttgctgattttggactaattacaatgaca
aacacgttccatatggtaacagagagtcaaagcaatcccccacccattattgatttgata
acaataaagctgagtgaaatgcgactatacagatctcaatttataaatgatacataccag
gaagtattagatctactactgccattaaatcttgaagtcatcgttgagcgaaatttatcc
tgggagtggtatcaggaaattccttgttttaatataaatgctcagctaaagcccatggag
ttcattctcagtcaagaagatataacaactatttttaaaacattatatggcaatatatgg
tatgaagaaggtggtagtgcctcacctgctgtcataaaagaccaaagtaatgtcaccagt
gttactaatgctgcatcccattctggaggggccactgtggtgaccgctgctgtggtagaa
gtacattcacgtgcgtcacaagttaagacaacactaaatataagtttcagaactgattat
ctcaccatgatactgtatagtccagatcctagacaggcttcatttacagatgttcgtgac
cctgctctgaaacttgctgaatttaaactggagaatattataagtactgcaaaaatgcat
acggatgactcaacattttgttctttctcattaaaaaactgtattttagatgataaaagg
cctcatgtcaagaaagcaactcctagaatgataggactgacagttgggtttgacaaaaaa
gacatgatggatgtaaagtataggaaagtcagagaaggttgtgtgactgatgcagtcttt
caagaaatgtatatctgtgcaagtgtggaatttctgatgaccgttgcaaatgtctttttt
gaggcctataccatgggtactactgtagaaaccactgttcaaacatggacttctaaggaa
gaagcacctatggaggaatcagataagtgggaaataaatatttttattaaaaatcctgaa
attgtgtttgtggctgacatgacaaaaaatgatgctccttcattggtcattacaacacaa
tgtgaaatttgctataaagctgaccttaaaaacagcaccatcactgctgccattaaagat
ctccaagtgacggcatgcccatttcttccagtcaagagaaaaggcaaaattactactgtt
ttgcaaccctgtgacttgttttatgagattacccagatagatacaaatccacaagtgatt
gaggtttcagtaaaatccctgacactaaaggtttcaccagttattataaataccatgatt
accataacttcagcactttatgcaactaaggaaaccgttcccaaagaaactgcttcttcc
acagtacatttatgggagaagaaggatacaaagaatttaaaaatgtggttccttgaagaa
tcaaatgaaagtgaaaaaatagtccctgcaactgaattggtacccagtggagagacaata
aaaatgaacatcgattctatttttatagttcttgaggctggaattggtcacagaacagtg
cctatgcttttggcaaaatcacgtttttcaggggaaggcaaaaattggagttccttaata
aatctccactgtcagcttgagctagaagtgcattattataatgaaatgtttggtgtgtgg
gagcctttgcttgagcccttagaaattgatcaaactgaggattttagaccatggaatctt
ggaattaagattaaaaagaaagcaaaaaagacccttgttgagtcagaaactgaagaagaa
aactacaaagtgccagaatataaaactgtcatcagtttctattcaaaagaccagttaaac
attacattatccaaatgtggtcttgtaatgttaaataatttagtcaaggcatttacagaa
gctgccactggatctaaagctgtcttcataagggatctagcaccgtttattatcttcaat
tctcttggacttaatatttctgtttcaccaagtgattcttttagcatacttaatgttcct
gtggcaaaatcatatatgttgaaaaatggagagagtttaagtatggattatgttcgaacg
aaggacaatgatcatttcaatgcaatgactagcctaagcagcaaactcttcttcattctt
ctcacacctgttaatcactctactgccgataagattcctttaacaaaagtgggacgacgt
ttatactctgtgaggcacagagagtctggagttgaaagatctattgtttgtcagattgat
acagtggaaggaagtaagaagataacagttcgctccccagtacagattagaaatcatttt
tcagtcccattctatgtttatgaagggggtaccttattgggaactgcttcacctgaaaat
gaattcaacgtaccattaccatcttaccggtcattcctttttttgaagccagaagacaag
gactaccaaataagtgaagcaattgactttgaagaaattagaaaaaatgaaggagcgctc
ctaaagaagaagtgtagatctctagacccttctaagaaatcatttctcattaatattgtc
ccagaaaaagataatttgacatctctgtcagtgtattcagaagatggttgggacttacca
tacataatacatttgtggcctcctatcctactccgaaatcttcttccttacaaaattgct
tattatatacagggaattgaaaacttagtctttactctacatgagggacattctgcccag
atttgtgctgcacagttggataaagccaggctacatttaaaattacttggctatcttaat
catgattggaaaagtgaatatcacataacacctaacctacaagacatcactttcatcaat
tttacctgtgttacagaaatagaaaagactgatttagatattgctgtccatatgacttac
aatactggtcagacagttgtggcatttcatagtccttactggatggtcaataaaactggc
cgaatgttacaatacaaagcagatggaatccatcggaagcatccacctgattacaaaagg
ccggttctcttttcttttcagccaaataacttttttaataataataaggtacagcttatg
gtaactgatagtgagttgtccgatcaattttcaattgatactgttggtagtcatggagct
gttaaatgcaaaggcctgaaaatggaatatcaagttggtgtcactatagacctcagtagt
tttaacattactagaattgtgacatttactcctttttatatgattaaaaacaaaagcaag
tatcagatatcagtggctgaagaaggaagtaataaatggcactttcttgatttggagcag
tgcatccccttttggcctgagtatacttctggtaaacttctgattaaagttgaaaggagt
ggagatcctcccaaaagaatatactttaacaagcaagaaaattgtattttattgcgtctg
gataatgaacttggaggtataatagcagaagttaatttggctgagcattctacagttatt
acattttcagattatcatgatggagcagctacattcctgttaataaatcacacaaggaat
gaccttgttcagtacatgcagagttcactcagtgaaatagaagattccctccctcctgga
aaagcagtgttttatacatgggctgatccagtgggttctcgaaagctgaagtggaagtgt
ggaaaaagccaaggagaagtaacacaaaaggatgatatgatgactcctatagatttgggg
aaaaagaccatttatttagtgtcattctttgaaggcttacagcgcattattttattcact
gaagatccaagggtatttaaagtaacatatgaatctgaaaaagcagagttagcagagcaa
gaaattgtattggcattacaagatgttggaatttctcttgtcaacaattacacaaagcaa
gaagtagcctatataggcattacaagttctgatatcgtctgggagacaaagcccaaaaag
aaggcaagatggaagccaatgagtgtgaagcacactgaaaagttagagaaagaatttaag
gaatatactgaatcttcaccttcagatgataagattattgagttggataatagcattccg
gttcgcttcacacctagtggtaacaacatgaaaattctcctgccaaatatgatagcttta
cgaagaaattatcttccagcactaaatgtggaatatagcacatctgcacatcagtcatca
tttagaattcagatttacagaatacagatccaaaatcagatacatggtgctatatttcca
tttgtgttttatcctattaaacctccaaagtcagtcaccatggattcagcaccaaagccc
tttacagatgtcagtattgtcatgaggtctgcaggacattcccatatatcacgtattaag
tatttcaaagtgttgattcaagaaatggatctaaggttagaccttgggtttgtctatgct
ttagcagaccttatgacagaagctgaagtgactgaaaagacagaggttgacctttttcac
aaagatgtagaagcttttgaagaagaatataaaacagtttccttcgaagatcaatcgcaa
gtcagtctctatgaatattttcatatatctcctatcaagttgcatctaagtgtttcactg
agttcgggcagagaagaagctaaagattcgcataaggatgaaggactgattccagttcat
tctttaaatcttttgctgaaaagtattggtgccactcttacagatgtacaagatgtagtt
tttaagcttgcgttttttgaactcaactaccagttccatacaacatccgaactacagtcc
gaagtagtaagacattattcaaaacaggccattaaacagatgtatgtactcattcttgga
cttgatgttttgggaaatccctttggcttaatcagagaattttctgaaggtgtagaagca
tttttttatgaaccttaccagggagccatccagggtcctgaagagtttgtggaaggaatg
gcactaggacttaaggcactagttgggggagctgttggtggattagctggtgctgcctcc
aaaatcacgggtgctatggctaaaggggtagcagctatcactatggacgaagactaccag
cagaaaagaagggaagctatgaataagcaaccagctggttttagagaaggcatcactcgt
ggaggaaaaggcttagtttctggttttgtaagtggcataacaggaattgtaacaaagcca
atcaaaggggctcagaaagaaggagcagctgggttctttaaaggtgtagggaaaggtcta
gtcggagcagtagcaaggccaactggaggcatcatagacatggccagcagcacatttcaa
ggaataaaaagagctacagagactttcgaagtagagagtttgcgacctcctcggttcttt
aatgaagatggagttattagaccttacaggttgagggatggtactggaaatcaaatgtta
cagaaaattcagttctacagggaatggaatatgactcacgatagcagtagtgatgatgat
gatgatgagtcagatctaaaatcttaa
DBGET
integrated database retrieval system
