Otolemur garnettii (small-eared galago): 100947662
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Entry
100947662 CDS
T07855
Symbol
NUP54
Name
(RefSeq) nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03013
Nucleocytoplasmic transport
oga05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100947662 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100947662 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oga03019
]
100947662 (NUP54)
Messenger RNA biogenesis [BR:
oga03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100947662 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
100947662
NCBI-ProteinID:
XP_003790116
Ensembl:
ENSOGAG00000016341
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MAFNFGAPSGTSGTAAAPAAPAGGFGGFGTTSTTAGSAFSFSAPANTGTTGLFGGTQNKG
FGFGTGFGTTTGTSTGLGTGLGTGLGFGGFNTQQQQQQTTLGGLFSQPTQAPTQSNQLIN
TASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYS
CMPSNKDEDGLVVLVFNKKETDIRSQQQQLVESLHKILGGNQALTVNVEGIKTLPDDQTE
VVIYVVERSPNGTSRRVPATTLYAHFEQANVKTQLQQLGVTLSMTRTELSPAQIKQLLQN
PPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDIS
ELQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQC
ELNAPTQFKGRLNELMSQIRMQNHFGAVKSEEKYYIDADLLREIKQHLKQQQEGLSHLIS
IIKDDLEDIKLVEHGLNETIHIRGGAFS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaattttggggctccttcgggcacatctggcaccgctgcagcccctgcggcc
cccgcgggcgggtttggaggatttgggacaacatctacaactgcaggttctgcattcagc
ttttctgccccagctaacacaggcactactggactctttggtggcactcagaacaaaggg
tttggatttggaactgggttcggcacaacaacaggaactagcactggcttaggtactggt
ttgggaactggactgggatttggaggatttaatacccagcagcaacagcagcaaactaca
ttaggtggtctcttcagtcaacctacacaagctcctacccagtccaaccagctgataaat
actgcgagtgctctttctgctccaacgctattgggagatgagagagatgctattttggca
aaatggaatcaactgcaggccttttggggaacaggaaaaggatatttcaacaataacatt
ccaccagtggaattcacacaggaaaatcccttttgccgatttaaggcagtaggttatagt
tgtatgcccagtaataaagatgaagatgggctagtggttttagttttcaacaaaaaagaa
acagatattcgaagccaacaacagcagttggtagaatcattgcataaaattttgggagga
aaccaagcccttactgtaaatgtagagggtatcaaaacattgccagatgatcagacagaa
gttgtcatttatgttgttgagcgttctccaaatggtacttcaagaagagttccagctaca
actttatatgcccattttgaacaggctaatgtaaaaacacaattgcagcaacttggggtg
accctttctatgactagaacagaactttctcctgcacagatcaaacagcttttacagaac
cctcctgctggtgtggatcctattatttgggaacaagccaaggtggataaccctgattct
gaaaagttaattcctgtaccaatggtgggtttcaaagaactcctccgaagactgaaggtt
caagatcagatgactaagcagcatcaaacaagattagatatcatatctgaagatattagt
gagctacagaagaatcaaactacaactatggccaaaattgcacagtacaagaggaaactc
atggatctttcccacagaaccttacaggtcctaatcaaacaggaaattcaaaggaagagt
ggatatgccatccaggctgatgaagagcagttgcgagttcagctagatacaattcagtgt
gaactcaacgcacctactcagttcaagggccgactaaatgaactgatgtcccaaatcagg
atgcagaaccattttggagcagtcaaatcagaagagaaatattatatagacgcagatctg
ttacgagaaatcaagcagcatttgaaacaacaacaggaaggcctcagccatttgattagc
atcataaaagatgacctagaagatataaagttggtggaacacggattgaacgaaacaatc
cacatcagaggtggtgcctttagttga
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