KEGG   Otolemur garnettii (small-eared galago): 100948717
Entry
100948717         CDS       T07855                                 
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
oga  Otolemur garnettii (small-eared galago)
Brite
KEGG Orthology (KO) [BR:oga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oga04131]
    100948717 (COPB2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oga04147]
    100948717 (COPB2)
Membrane trafficking [BR:oga04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    100948717 (COPB2)
Exosome [BR:oga04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   100948717 (COPB2)
SSDB
Motif
Pfam: TPR_COPA_B B-prop_COPA_B_2nd WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_WDR75_1st EIF3I Beta-prop_EML Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_SCAP PEP5_VPS11_N Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_SPT8 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_LRRK2 Helicase_dom4_arc HEAT_GCN1
Other DBs
NCBI-GeneID: 100948717
NCBI-ProteinID: XP_023368763
Ensembl: ENSOGAG00000010265
LinkDB
Position
Unknown
AA seq 886 aa
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGFGPLFSFLAFVISRFVVVCGDGEYIIYTA
MALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFKNFKEKKSFKPDFGAESIYGGFLLG
VRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQE
THEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSVNRLNYYVGGEIVTIAHLDRT
MYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRTR
VAHFLEKQGFKQQALTVSTDPEHRFELALQLGELTIAYQLAVEAESEQKWKQLAELAISK
CQFGLAQECLHHAQDYGGLLLLATASGNATMVNKLAEGAERDGKNNVAFMSYFLQGKLDA
CLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKVNQKAAESLADPTEYENLFPG
LKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAKGFQPSRSIAQQELDEKLPSS
TPVIVASHTANKEEKSLLELEVDLDNLELEDIDTTDINLDEDILDD
NT seq 2661 nt   +upstreamnt  +downstreamnt
atgcctctgcgacttgatattaaaagaaaactaactgctagatcagatcgagttaagagt
gtggatttgcatcctacggagccatggatgttggcaagtctttacaatggcagtgtgtgt
gtctggaatcatgaaacacagacactggtgaagacatttgaagtgtgtgatcttcctgtt
cgagctgcaaagtttgtcgcaagaaagaactgggttgtgacaggagcggatgacatgcag
attagagtattcaattacaatactctggagagagtccatatgtttgaagcacactcagac
tacattcgctgtattgctgttcatccaacccagcctttcattctaaccagcagtgatgat
atgctcattaagctctgggactgggataaaaaatggtcttgctcacaagtgtttgaagga
cacactcattatgttatgcagattgtgatcaaccccaaagataataatcagtttgccagt
gcatccttggacaggaccatcaaggtgtggcagttgggctcttcttcaccaaacttcact
ctggaaggacacgagaaaggtgtgaattgcatcgattactacagtggtggcgacaaacca
tacctcatttcaggtgcagatgaccgtctcgttaaaatatgggattaccagaataaaaca
tgtgtgcagacactggaaggacatgcccaaaatgtgtcttgtgctagttttcatcctgag
ttgccaattatcatcacaggttcagaagatggaacagtgcgtatttggcattcaagcacc
taccggcttgagagcacattgaactatggaatggaaagggtatggtgtgtggccagtcta
agagggtccaacaatgtcgctttgggctatgatgaagggagcatcattgttaagcttggt
cgggaggaacctgccatgtccatggatgccaatggaaagataatttgggccaagcattca
gaagtccaacaggccaacctaaaagcaatgggatttggtcctctgttttccttcttggct
tttgtaatttctaggtttgttgtggtgtgtggtgatggggagtatataatctacacagca
atggcattgagaaacaagagctttgggtctgctcaggagtttgcatgggcccacgactct
tcagaatatgccatcagagagagcaacagcgttgtaaagatatttaagaattttaaggaa
aaaaaatcatttaaaccagattttggagctgaaagtatctatggaggcttcttattggga
gtcagatctgtaaatggcttagccttctatgactgggacaatacagaactcatacgcaga
attgaaatccagcccaaacatattttctggtctgactccggagagttagtctgtattgcc
accgaggaatcattttttatccttaagtatctgtcggaaaaagtcttggctgcacaggaa
acacatgagggagttactgaagatggcattgaagatgcctttgaggttctcggtgagatt
caggagattgtgaaaacagggctgtgggtaggcgattgcttcatttacacgagttctgtg
aacagattaaattattatgttggaggagaaatagtcaccattgcccacttggacaggaca
atgtatctcctgggctatattccgaaagacaacaggctttatcttggggataaagaattg
aacattgttagctactccttgctggtttcagtcctggaataccagacggctgttatgcgg
agggactttagtatggctgataaggtccttcctaccattccaaaagaacagaggaccaga
gttgcacactttttggaaaagcaagggttcaagcagcaagctcttacagtatccacagat
cctgaacatcgttttgaactcgctcttcagcttggagagttaacaattgcataccaatta
gcagtggaggcggagtcagaacagaagtggaaacaactagctgaacttgccattagtaaa
tgtcagtttggcctagcccaggagtgcctgcaccatgcacaggattatgggggtctgctg
cttttggccactgcctctggaaatgctactatggtgaacaagctagcagagggtgcagag
agagatggcaaaaataacgtggcattcatgagctactttttacagggcaagcttgatgct
tgcctggagctcttgattagaactggacggctgccagaagctgccttcctggcccgaact
tacttacccagtcaggtttcaagggtagtgaaactctggagagaaaatctctcaaaagtc
aatcagaaagcagcagaatcccttgctgacccaacagagtatgaaaaccttttccctgga
ttaaaagaagcctttgtggttgaagaatgggtgaaggaaacacatgctgatctgtggcca
gccaaacaatatccacttgtcacgccaaatgaagagagaaatgttatggaagaggcaaaa
ggctttcagccctccagatctatagctcaacaggaacttgatgagaaacttccttcttct
actccagttattgtggcctcccacacagccaacaaagaagaaaagagtttacttgaacta
gaagtagatttggataatttggaattagaagatattgacacaacagatatcaatctggat
gaagatattttggatgactga

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