Otolemur garnettii (small-eared galago): 100949346 Help Entry 100949346         CDS       T07855                                  Symbol SPG11 Name (RefSeq) spatacsin isoform X1   KO K19026   spatacsin Organism oga  Otolemur garnettii (small-eared galago) Pathway oga05014   Amyotrophic lateral sclerosis oga05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:oga00001]  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     100949346 (SPG11)    05022 Pathways of neurodegeneration - multiple diseases     100949346 (SPG11)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:oga03400]     100949346 (SPG11) DNA repair and recombination proteins [BR:oga03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      100949346 (SPG11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  100949346 NCBI-ProteinID:  XP_003791835 Ensembl:  ENSOGAG00000004699 LinkDB All DBs Position Unknown AA seq 2443 aa AA seqDB search MAAEEGAGKAVSAGCSSCPVAMERVLPMLLVSVPAEATGKLGSRAQLHREQEAVGSLTAE GCLRVISLTPGGRGGGRCCLEGPFQQFMWEESHNSTPTDKPRLLALGENYELFIYEFNLK DGQCDATILYSYSGKILQKLIEDQDISISLLSLKILSFHNNTSLLFINKCVVLHITFPER DAEIRLLNCFTLPLPAHSVDMIVDAQLCRGILFVLSCLGWIYIFDIVDGTHVAHVDLVLH QEDMCNEQQQEPAKISSFTSLRVSQDLDVVVIVSSSNSAIALNLNLYFRQYPGHLLFERM LEDLPIQGPKGIDEDDPVNSDYNMKLTKFSFQVDRSWKAQLSSLNETIKSSKLEASCCAP WFQDILHLEFPESGNHSISVPNWVFIPQDIMHKEYNCQQKDHAKTSDPRRSWKIMHVSEQ EEPTEFKCMSVTGFTVLFTLTVERTGCTIVLWDLETQGMQCFSLGKKCIPVDSSGDQQLC LVLTENGLSLILFGLTQEEFLNRLMIHGSASTVDSLCHLNGWGRCSIPIHALEAGIENRQ LDTVDFFLKSKENLFNSSSKSSVPDRFDHFSSHLYLRNVEELTPALDLLCSAIRESDSET QSKHFSEQLLNLTLSFLNKQIKELFIHTEELDEHLQKGVNILTRYINELRTFMIKFPWKL TDAVDEYDVNENIPKGKESDMWEKLSTEEVIASAILNNRIPEAQTFFRINSHSAQRLEEV IRIGLDLVFDNLKKNNIKEASEFLKNMAFDVKDQLLKICVYTTDKNIRDFLVEILKEKSC FSEKQKRTIDFVHQVEKLYLEHFPENMQIQAFPRYLIKEQDFFKHRCVLDSFLKYDHKDE FNKQDDRIVLNWALWWDQLTQDRILLPKISPEEYKSYSPEALWRFLTTRHDWLNITLWIG EFQTQDNYASLQQNKWPPLSVDVISQNTCCNNYMRNEILDKLARNGIFLVSELEDFECFL LRLSRIGGVIQDTLPVQKYKSKEGWDFHSHFILYCLEHSLQHLLYVYLDCYRLSPENCPL LEKKELREVHPWFEFLVQCRQVSGNLTDPKLMFHASLANAQILIPTNQASVSSMLLEGHT LLALATTMYAPGGVSQVIQNEENENCLKKVDPQLLKMALTPYPKLKTALFPQCTAPSVLP PDITLYHLIQSLSPFDPSRLFGWQSANTLAIGDALSHLPHFSSPDLINKYAIVERLNFAY YLHHGRPSFAFGTFLVQELTKSKTPKQLIQQVGNEAYVLGLSSFHIPSVGAACVCFLELL GLDSLKLRVDMKVANIILSYKCRNEDAQYSFIRESLAEKLPKLADGEKATIEELLVLLEE GIWNSIQQQEIKRLSSESSSQWALVVQFCRLHNMKLSMSYLQECAKANDWLQFVIHSQLH NYHPEEVKSLIKYFSPVLQDHLRLAFENLSSVSTSRMDSDQVCNKSPQELQRNNEEMTDF FEILLRCSEEPDSWHWLLAEAVKHQAPVLSVLASCLQDASAIPCLCVWIVTSVEDSVAAE AMKHIQGSTEGHTWDLEDLSVIWRTLLIRQKSKTLTRGFQLFFKDSPLLLMMEIYELCMF FKNYKEAKAKLLEFQKNLETLDMASTGVHHVIPATWLKDQVCFLLKFMLQQCKTQYELGK LLQLFVGIEHLFSEGLDVKKLCLLSQILKDTSIAINRVIITNYSIENFQHECRSVLERLQ TDGQFALARRVAELAELPVDNLVIEEITQEMQTLKHIEQWSLKQARIDFWKRCHENFKKN CISSKAAASFFSAQALVACDYPTGRSSIEERHLLLTLSGHWLAQEDLVPLDKLEELEKQI WLCRITQHSLGGNQEEMEPRFSQQISASGELSFDSLANEFSFSKFAALNTSKYFELNGLP SKETCENSLDWKEQESLNFLIGRLLDDDCVHEASRVCRYFHFYNQDVALVLHCRALASGE ASVNDLHPEIRSLLQSAELLEEEEEPSIPLGKVQGTSSLDSQSFVVVPSGDAVVTHLQTL TSRCLHGKNYCRQVLCLYELAKELGCSYTDVAAQDGEAMLQAILASQQPDRCKRAQAFIS TQGLKPDTVAELVAEEVTRELLALSEGTGHKQMFSPAEESQMFLQLTTLCQDRTLVGLKL LDKISSVPHGELSCTTELLILAHHCFTLTCHMEGIMRVLQAARMLTDNHLAPNEEYGLVV RLLTGIGRYNEMTYIFDLLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCHPGDSEKHNM IALCFSMCREIGENHEAAACIQLKLIESQSWEDSLKDVYQLKQLLLKALTLMLDAAESYA KDSCVRQALHCHRLTKLITLQIHFLNTGQNTMLINLGRHKLMDCIVTLPRFYQASIVAEA YDFVPDWAEILYQHVILKGDFNYMEEFKQQRLLRPSIFEEISKKCKQHQPTDIVMENLKK LLTYCEDIYLYYKLAYEHKFYEIVNVLLKDPQTGCCLKDMLAG NT seq 7332 nt NT seq  +upstreamnt  +downstreamnt atggctgcagaggaaggggctgggaaagctgtttcggctggctgcagtagctgccccgta gccatggagcgggttctaccgatgcttttggtgtcggttcccgccgaggcgacagggaag ctgggatcccgggcgcagctgcacagagagcaggaggctgtagggagcctgacggctgag ggctgcctccgagtgatttccttgacgccaggcggccggggcggggggcgctgctgcctc gagggccccttccagcagtttatgtgggaggagtctcataacagcacaccaactgacaag cccagattacttgctcttggtgaaaactatgaactgttcatctatgagtttaatttgaaa gatggacaatgtgatgcaaccattttatatagctatagtgggaagatattgcaaaagctc attgaagatcaggatatcagtatttccttattgtctttgaaaattctgtcatttcacaat aacacatcattattgttcatcaacaaatgtgttgtcctacacattactttccccgaaaga gatgctgaaattagactactcaactgtttcacactacccttgcctgcacattcagtggac atgattgttgatgcacagctctgcagaggaattctttttgttttaagttgcttaggctgg atctacatttttgacatcgtggatggtacacatgtagctcatgtggatttagtacttcac caggaagacatgtgtaatgagcagcagcaggagccagccaagatttcttcctttacttca ttaagagtgtctcaagacctagatgtcgtggtgatcgttagctcctccaactctgcaatt gctcttaacttaaatttgtatttcagacaatacccaggacacttactgtttgaacgaatg ctagaagaccttccaattcaaggacctaagggaatagatgaagatgatcctgttaactct gactacaacatgaaactgaccaagttttccttccaggttgataggtcttggaaagcacag ctgtcatcattaaatgaaacaataaagagctccaaactggaggcatcctgttgtgctcca tggttccaggatattttgcatttggagttccctgaatctggtaaccacagtattagtgtg ccaaactgggttttcattccacaggacataatgcataaggaatataattgtcaacaaaaa gatcatgccaagaccagtgatccaagaagatcatggaaaataatgcacgtcagtgaacaa gaggaacccactgagtttaagtgtatgtctgtgacaggattcacagtactgtttactttg acagtggaaaggacaggctgtaccattgtcctctgggatttggagacccagggcatgcag tgtttttctcttggcaaaaagtgtattcctgtagacagtagtggagaccagcaactgtgc cttgttttgacagaaaatggactgtctctgattttgtttggtttgactcaagaggagttt ttaaacaggctaatgatccatggaagtgccagtactgtggactctctctgtcacctcaat ggttgggggaggtgctcaattcccatacatgcactagaggccgggatagaaaatcgtcag ctggacacagtagatttctttttgaagagcaaggaaaatctttttaattcatcctcaaaa tcttctgtacctgataggttcgatcacttctcgtctcatttatatttaagaaatgtggaa gagctgaccccagcattggatttactttgctcagcaattagagagagtgattctgaaacc caaagcaagcacttttcagaacaattgcttaatctgacactgtctttccttaacaaacaa ataaaggagctttttattcacactgaagagctagatgaacatctgcagaaaggagtgaac attttgaccaggtacattaatgaacttcgaactttcatgataaagtttccttggaagttg acagatgctgtagatgaatatgatgtaaatgaaaatatccccaaaggaaaggagagcgat atgtgggagaaactcagcactgaggaagttattgccagtgccattttaaacaacagaata ccagaggcacaaactttcttcaggattaacagtcattctgctcaaagactggaggaggtg atcagaataggcctagatttggtctttgataatttaaaaaagaacaatataaaggaagcc tctgaatttttgaaaaatatggcctttgatgtaaaagaccagttgctcaagatatgcgtc tatacaactgataaaaacatacgggactttctggttgaaattttaaaagaaaagagttgt ttttctgagaaacaaaaaagaactatagacttcgtgcatcaagttgagaagttgtatttg gaacatttcccggaaaacatgcagatccaggcctttcccaggtatttgataaaggaacaa gattttttcaagcacagatgtgttttggattcattcctgaaatacgatcataaagatgaa tttaacaaacaggacgatagaattgtgttaaattgggctctgtggtgggatcaactaaca caagaccgcatccttctacccaagataagtccagaagaatacaagtcatattctcctgaa gccctctggaggttcctcacgactcgccatgattggttaaacattaccttgtggattgga gaatttcagacccaggataattatgcttcacttcaacagaacaagtggcctcctctgagt gttgatgttattagtcagaatacttgctgcaacaactatatgaggaatgaaattttagat aagctggccaggaatgggatttttcttgtgtctgagttagaagactttgaatgcttcctt ctaagactgagccgtattgggggcgtgatacaagataccctccctgttcaaaagtacaag agcaaagaaggttgggatttccattctcacttcattctgtattgtttagaacatagtctg cagcatcttctttatgtctacctcgattgttacagacttagtcctgaaaattgtcccctt ttggaaaaaaaagagttacgtgaagtgcacccttggtttgaatttttagttcagtgtcga caagtttctggtaatttaacagatcccaaactgatgttccacgctagccttgcaaatgct cagattttgattcccaccaatcaggccagtgtaagcagtatgctgttggaaggacatacc ctcctggcccttgctactacaatgtatgctcctggaggtgtcagccaggttattcagaat gaagaaaatgagaattgtttgaagaaagtggatccccagctactgaagatggcattaact ccttaccccaagctaaaaactgctctcttcccacagtgcactgctcctagtgtcctgcca cctgacattacactctaccacctgattcagtcattatcgccctttgatcctagcagattg tttggctggcagtctgccaacacactagccataggagatgcattgagtcacctcccgcat ttctctagccccgacctgattaataaatacgctatagtggaacgtctgaattttgcttat tatttacatcatggacggccatcatttgcatttggtacttttctagtccaagaattaacc aagagcaagactcccaagcagctgatccagcaagtaggcaatgaagcctatgttttaggg ctctcctctttccatataccttcagtaggagctgcctgtgtttgttttttagaattgctt ggccttgacagcctcaagctccgagttgatatgaaagtggccaatataattttgagctac aagtgtagaaatgaagatgctcaatacagctttatcagagagtctctagctgaaaaacta cccaaactggctgatggtgaaaaggcaacaatagaagaattgctcgttctcttagaagaa ggtatatggaacagcatccagcagcaagaaataaagaggttatccagtgaatctagcagc cagtgggccttagtggtacagttctgcaggctccataatatgaaactgagcatgtcttac cttcaagaatgtgctaaagcaaatgattggctgcaatttgttattcatagccaactccat aactaccacccagaggaggtgaaatcccttatcaaatacttcagccctgtcctgcaagac cacttaaggctggcttttgagaacttgtcttcagtatccacctccagaatggacagtgat caagtctgcaacaagtcgccccaagaactccaaaggaacaatgaagagatgacagatttc tttgaaattctactccggtgctcagaggagccagattcctggcactggctcttggctgag gcagtgaaacatcaggcccctgtcctcagtgtcctggcttcatgtctccaggatgccagt gctattccttgtctctgtgtttggattgttacttctgttgaggacagtgttgcagctgaa gcaatgaaacacattcagggctcaacagagggccatacctgggaccttgaggacctttca gtcatctggagaacattattaataaggcagaagagcaaaactctcaccagaggtttccag cttttctttaaggattcccctctactattaatgatggagatctatgaactatgtatgttc ttcaagaattataaggaagccaaagctaagcttctggagttccagaagaaccttgaaact cttgatatggcaagcacaggggtccaccatgtgatccctgctacatggctgaaggatcag gtgtgtttccttttgaagttcatgctacagcagtgtaagacccagtatgagttgggaaaa cttttacagctgtttgttggaatagagcatctcttctctgaaggtctagatgtgaagaag ctttgtctccttagccaaattttgaaggatacatctatagccattaatcgtgtaattatt accaactatagcattgagaattttcagcatgaatgtagatctgttttggagagactgcag acagatggacaatttgctttggccaggagggtggcagaattagctgagttacctgtggac aacttggttattgaagagataacacaggaaatgcagactctaaaacacattgagcagtgg tccctgaaacaagcaagaattgacttctggaaaagatgccatgagaattttaagaaaaat tgcatttcaagcaaagcagctgcttcttttttctcagcccaggcccttgtggcatgtgac tacccaactggcaggagcagcattgaggagcgccatctactgctcacactgtcaggacac tggcttgcccaggaggacctggtgcccttggacaaactggaagagctggagaagcagatc tggctctgccgcatcacccaacactcccttggagggaaccaggaggaaatggagcccagg ttttctcagcagatctcagctagtggtgaactttcctttgatagtttagccaatgagttt tcgttctccaagtttgctgctctgaacacatcaaaatattttgaacttaatggacttcca tccaaagagacatgtgagaatagcctggattggaaggagcaggaatcactaaactttttg attggacgcctgttggatgatgactgtgtgcatgaagccagtagagtatgccggtatttt catttttataaccaagatgttgccttggtgttgcactgcagagcactggcctcaggagaa gctagtgtgaatgacctgcacccagagatccgttccctcctacaaagtgctgagctgctt gaggaagaagaggagcccagcattcccctagggaaagtccaaggcacttcgagtctggat agtcagtcatttgtggtggtaccctctggtgatgcagtggtgactcatctgcaaactctg acgagcagatgtctccatgggaagaactactgccggcaggtcctctgtctgtatgaactt gctaaggagttgggctgttcctacacagatgttgctgcccaggatggtgaagccatgctc caggcaatcttggcctctcagcagcctgaccgatgcaaacgagcccaggccttcatcagc acccaaggcctcaagccagatactgtagctgaacttgtggctgaagaggtgacccgagag ctgctggccctatcagagggaacaggacataaacagatgttcagcccagcagaggaaagc cagatgtttcttcagctaaccactctgtgtcaagaccgcactttggtaggcttgaagttg ttggataagatttcctccgttcctcatggggaattgtcttgcaccacagaactcttgatc ctggcccatcactgcttcaccctgacatgccacatggagggcatcatgcgagtcctacag gccgcccggatgctcacagataaccacttggcccccaatgaggagtatggactagtggta cgtctcctcactggcattggaagatataatgagatgacatacatatttgatttgctgcat aaaaagcactacttcgaagtgctgatgagaaagaagttggatccgagtggtaccctgaag acagcgctgttggattacatcaaacgctgccaccctggggacagtgagaagcacaatatg attgccctgtgctttagcatgtgccgggagattggcgagaaccatgaggcagctgcctgc atccaactgaaactgattgagtctcaatcctgggaagacagcctcaaggatgtgtaccag ctgaagcagctgctgctgaaggccctgactctgatgctagatgcagcggaaagttatgcc aaggattcctgtgtgcgacaggccttgcactgtcaccggctcaccaagttgataactcta cagattcactttctgaacactggccagaacacaatgcttatcaacttgggccgccacaag ctgatggactgtattgtaaccctacctcggttttaccaggcttccattgtggctgaagcc tatgattttgttccagattgggctgaaattctataccagcatgtgattcttaaaggagac tttaattacatggaagaatttaagcagcaaaggttattaaggcccagtatatttgaagag atttccaaaaaatgtaaacaacatcaacccactgacatagtgatggaaaacctgaagaaa ttactcacatattgtgaagatatctacctgtattacaagttggcatatgaacacaaattt tatgaaattgtaaatgtgcttctgaaagaccctcagacaggttgctgtctaaaggacatg ctagcaggttag

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