Otolemur garnettii (small-eared galago): 100949347
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Entry
100949347 CDS
T07855
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X3
KO
K13217
pre-mRNA-processing factor 39
Organism
oga
Otolemur garnettii (small-eared galago)
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oga03041
]
100949347 (PRPF39)
Spliceosome [BR:
oga03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100949347 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_12
TPR_MalT
TPR_16
Motif
Other DBs
NCBI-GeneID:
100949347
NCBI-ProteinID:
XP_012662030
Ensembl:
ENSOGAG00000024171
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MQGLLRFEDQDSARGDQNIAMFYPTSTQMVYRRGLQAIPLSVDLWIHYINFLKETLDPSD
PETNSTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYS
HHFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAK
LITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEAIKRPYFHVKPLEKAQLKNWKEYLE
FEIENGTHERVVVLFERCVISCALYEEFWMKYAKYMENHSIEGVRHVFSRACTIHLPKKP
MVHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDA
IKNAKSNHESSFYAVKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGD
LKQNEENILNCFDRAVHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQ
DSLKRKAENGSEEPEEKKAHTEDTTSSSTQMIDGDLQANQAVYNYSAWYQYNYQNPWNYG
QYYPPPPT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgcagggactgctgcgctttgaagatcaagactctgcacgtggggatcagaacattgcc
atgttctatccaacctccacccaaatggtttatcggcgggggcttcaggcaatacctctt
agtgttgacctttggatacattacataaacttcttaaaggaaacattggaccctagtgat
cctgagacaaacagtacaataagaggaacttttgagcatgctgttctagctgcaggaaca
gattttcgatctgacagattgtgggaaatgtatattaactgggaaaatgaacagggaaac
ctcagagaagttacagctatatatgatcgtattcttgggattccaacacagctgtatagt
catcattttcagagatttaaagaacatgtacagaataatttgcctagagatcttttaact
ggtgaacagtttattcagctgcgaagggaattagcttctgtgaatggacatagtggtgat
gatggtcctcctggtgatgatctcccttcaggaattgaagacataacagatccagcaaag
ctaattacagaaatagaaaacatgagacatagaatcattgagattcatcaagaaatgttt
aattacaatgagcatgaagttagtaaaaggtggacatttgaagaagctattaaaagacct
tattttcatgtgaaaccattggaaaaggcacagctaaaaaactggaaagaatacttagaa
tttgaaattgaaaatgggactcatgaacgagttgtggttctctttgaaagatgtgtcata
tcatgtgccctctatgaggagttctggatgaagtatgccaagtacatggaaaaccacagc
attgaaggagtgaggcatgtgttcagcagagcttgtactattcatctcccaaagaaaccc
atggtgcatatgctttgggcagcttttgaggaacagcagggtaatataaatgaagccagg
aatatcttgagaacatttgaagaatgtgttctaggattggcaatggttcgtttgcgaaga
gtaagtttagaacgacggcatggaaatatggaagaagctgaacatttgctccaggatgcc
attaagaatgccaaatcaaatcatgagtcttcattctatgctgtcaaactagcccggcat
cttttcaaaatacaaaaaaatcttccaaagtcaagaaaggtgcttttggaagcaattgaa
cgagacaaagagaacacaaagttatacctcaatttacttgaaatggaatatagtggtgac
ctcaaacaaaatgaagaaaatatcctaaattgttttgacagagctgtacatggttcatta
cctattaaaatgagaataacattttctcagagaaaagtggagtttcttgaagattttggt
tcagatgttaataagcttctgaatgcttatgatgaacatcaaacactcttaaaagaacag
gattctttaaaaaggaaagcagaaaatggatcagaagaaccggaagaaaagaaagcacac
acagaagatacaacttcatcatcaacacagatgattgatggtgatttacaggccaatcaa
gctgtatataattacagtgcctggtatcagtacaattaccagaatccttggaattatgga
cagtattatcctccccctccaacctga
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