Otolemur garnettii (small-eared galago): 100949542
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Entry
100949542 CDS
T07855
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03013
Nucleocytoplasmic transport
oga03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100949542 (CASC3)
03015 mRNA surveillance pathway
100949542 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oga03019
]
100949542 (CASC3)
Messenger RNA biogenesis [BR:
oga03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100949542 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
100949542
NCBI-ProteinID:
XP_003786448
Ensembl:
ENSOGAG00000034486
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSYSGSIGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAVNSSVKEEKGEEKPDTKSTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWNGERSNKSHRYQGPGGTLPPRTFINRN
AAGTGRMSTPRNYSRSGGFKEGRVGFRPMEAGGQYGGRSGETVKHETSYRSRRLEQTPVR
DPSPEADGPVLGSPEKEEAASETPAAAPDTAPPAPDRPIEKKSYSRARRTRTKVGDAVKV
AEEVPPPPEGLTPAPSVPETTPPPPTKTGNWEAPVDSATGGLEQDVAQLSIAEQNWSSGQ
PGQPSYLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPP
VHISIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNP
GLYPPPVSMNPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAP
SQVYGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcttcgcaggacacagaggacgaagaatcgggtgct
tcgggctcagacagcggcggctccccggcgcggggcggcgggagctacagcggtagtatc
ggaggcggcggcagcggctctctgccttcacagcgcggaggccgagccggggcccttcat
ctgcggcgggtggagagcgggggcgccaagagcgctgaggagtcggagtgtgagagtgaa
gatggcattgagggtgatgctgttctctcggattatgaaagtgcagaagactcagaaggt
gaagaaggggaatacagtgaagaggagaactccaaagtggagctgaaatcagaagctaat
gatgctgttaattcttcggtgaaagaagagaagggagaagaaaagcccgataccaaaagc
actgtgactggagagaggcaaagtggagatggacaggagagcacagagcctgtggagaac
aaagtgggcaaaaaggggcctaagcatttggatgatgatgaggatcggaagaatccagca
tacataccccggaaagggctcttctttgagcatgatcttcgaggtcaaactcaggaggag
gaagtcagacccaaagggcgtcaacgaaaactatggaaggatgagggtcgctgggagcat
gacaagttccgggaagatgaacaggccccaaagtcccggcaggagctcattgctctttat
ggctatgacatccgctcagctcataatcctgatgacatcaaaccccggagaatccgtaaa
cctcgatttgggagtcctccacagagagatccaaactggaatggtgagcggtcaaataag
tcccatcgctaccagggtcctgggggcaccttaccaccaagaacatttattaacaggaat
gctgcaggtactggccgcatgtctacacccaggaattactctcgatctgggggcttcaag
gaaggtcgtgttggttttaggcctatggaggctggtgggcagtatggtggccggtctggt
gaaactgttaagcatgagaccagttaccggtcacggcgcctggagcagactcctgtgagg
gacccatctccagaagcagatggtccagtgcttggcagtcctgaaaaggaagaggcagcc
tcagagacacctgctgctgctcctgacactgcaccaccagcccctgataggcccattgaa
aagaaatcctattctcgggcaagaagaactcgaaccaaagttggagatgcagtcaaggtt
gcagaggaagtgccccctccacccgaagggctgaccccagcaccttcagtcccagagacc
acccctcctccacctactaagactgggaactgggaggctccagtagattctgctacaggt
ggacttgaacaagatgtggcacaactgagcatagcagaacagaattggagttcagggcag
ccagggcagccttcttacctgcaaccacgagagcttcgaggtatgcctaaccatatacac
atgggagcaggacctccacctcagtttaaccggatggaagaaatgggtgtccaaggtggt
cgagccaaacgctattcatctcagcggcaaagacctgtgccagagccccctgcccctcca
gtgcatatcagtatcatggagggacattactatgatccactgcagttccagggaccaatc
tatacccatggtgacagccctgccccactgcctcctcagggcatgattgtgcagccagaa
atgcaccttccccacccaggtttacatccccatcagacaccggcacctctgcccaatcca
ggcctctatcccccaccagtgtccatgaatccaggacagccaccacctcagcagttgctt
gctcctacttacttttctgctccaggcgtcatgaactttggtaatcccagttacccttat
gctccaggggcactgcctccccctccacctcctcatctgtatcctaatacacaggcccca
tcacaggtatacggaggcgtgacatactataacccagcccagcagcaggtacagccaaag
ccctccccaccccggaggactccccagccagtcaccatcaagccccctccacctgaggtt
gtaagcaggggttccagttaa
DBGET
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