Otolemur garnettii (small-eared galago): 100950315
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Entry
100950315 CDS
T07855
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B
KO
K12821
pre-mRNA-processing factor 40
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100950315 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oga03041
]
100950315 (PRPF40B)
Spliceosome [BR:
oga03041
]
Complex A
U1 snRNP components
U1 related factors
100950315 (PRPF40B)
Complex B
100950315 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
SelB-wing_2
RhoGAP-FF1
WW_2
DTW
Motif
Other DBs
NCBI-GeneID:
100950315
NCBI-ProteinID:
XP_023371153
Ensembl:
ENSOGAG00000005126
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGILPPMLPPMGAPPPLTQIPGMVPPMMPG
MLMPAVPVTAATAPGADTASSAVAGTGPPRALWSEHVAPDGRIYYYNADDKQSVWEKPSV
LKSKAELLLSQCPWKEYKSDTGKPYYYNNQTLVKQEAVGKQQQQQPPTLQPQPPQPQPDP
PPVPPGPTPVPTGLLEPEPGGSEDCDVSEASQPQEQGFLQQLEEGPSSSAGQHQPPQQEE
EESKPEPERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSE
KKQAFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGELEVW
AVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDGMSSVTFQTTWSQAQQY
LMDNPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQT
FLDELHETGQLHSMSTWMELYPAVSTDVRFANMLGQPGSTPLDLFKFYVEELKARFHDEK
KIIKDILKDRGFCVEVNTAFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEARERERE
KEEARRMRRREAAFRSMLRQAVPPLELGTAWEEVRERFVCDSAFEQITLESERIRLFREF
LQVLEQTECQHLHTKGRKHGRKGKKHHRKRSHSPSGSESEEEELPPPSLRPPKRRRRNPS
ESGSEPSSSLDSVESGAAALGGRGSPSSHLIGSDHGLRKAKKPKKKTKKRRHKSNSPESE
TDPDEKAGKESDEKEQEQDRDRELRQTELSNRSPGFGIKREKTGWDTSESELSEGELERR
RRTLLQQLDDHQ
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgatgccccctccagggatccccccaccctttcctccgatggggctaccccccatgagt
cagagaccaccagccatcccccccatgccacctggcatcctgccccccatgcttccacca
atgggggcgccaccaccactcacacagataccaggaatggtacctccgatgatgccagga
atgctgatgccagcagtgcctgtcaccgcagcgacggctccgggtgcggacaccgccagc
tctgctgtagctgggacaggtcctccgagggccctatggagtgagcatgtggcccctgat
gggcgcatctactactacaatgctgatgacaagcagtccgtgtgggagaagcccagcgtg
ctcaagtccaaggcggagctgctgctgtcccagtgtccctggaaagaatacaagtccgac
acaggcaaaccttactactataacaaccagactttagttaaacaagaggctgtagggaaa
cagcagcagcagcagccaccgacactacagccacagcctcctcaaccacagcccgaccca
ccacctgtacctcctggccccaccccagtgcccacaggcctcctggaacctgagccaggt
ggaagtgaagattgtgatgtgtcagaagcttctcagccccaggagcagggcttcctgcag
cagctggaagagggccccagtagttctgctggacagcatcagcctccacaacaggaggag
gaggaatcaaagccagaaccagagcggtctggcctcagttggagcaaccgggagaaggca
aagcaggctttcaaggagctgctgagggacaaggctgtcccctccaatgcctcgtgggaa
caggccatgaagatggtggtcacagatcctcgttacagcgccttgcccaagctgagtgag
aaaaagcaagcgttcaatgcctacaaggcacagcgggagaaggaggagaaggaggaggcc
cggctaagggccaaggaggccaagcagaccctgcagcatttcctggagcagcacgaacgc
atgacctccaccacccgctaccggcgggcagaacagacctttggagaactagaggtctgg
gctgtggtccctgagagggatcgaaaagaggtttatgatgatgtcctcttcttcctggcc
aagaaagaaaaggaacaggccaagcagctccggcgccgcaacattcaggctctgaagagc
atcctagatggaatgagtagtgtcaccttccaaaccacatggtcccaggcccagcagtac
ctcatggataaccccagctttgctcaggaccatcagctccagaacatggacaaggaagat
gccctgatctgctttgaggagcacatccgagctttggagagggaggaggaggaggagcgg
gagcgggcccggcttcgggagcggcgccagcaacgcaagaaccgggaggccttccagacc
ttcctggacgagctgcacgagacagggcagctgcactcgatgtccacctggatggaactc
tacccagcagtcagtactgatgtccgctttgccaacatgctgggccagccgggctccacc
cctctggacttgttcaagttttatgtggaggagttgaaggcacgattccatgatgaaaag
aagattattaaggacattcttaaggaccggggcttctgcgtggaagtgaacacagccttt
gaagacttcgcccacgtcataagctttgacaagagggctgctgcgctggacgcaggcaac
atcaagctgaccttcaatagtctgctggagaaagcagaggcacgggagagggagcgggag
aaggaggaggcacgaaggatgcgccgcagagaggctgccttccgaagcatgctgaggcag
gccgtgcctcctctggagctaggcactgcctgggaagaggtccgtgagcgctttgtgtgc
gactcagcctttgagcagatcaccctggagtcggaacggatccggctcttccgggaattc
ctacaggtgctggagcagactgaatgccagcacctccacaccaaaggccgaaagcatggc
aggaagggcaagaagcaccatcgcaagcgttcccactcgccctcaggctctgagtcagaa
gaggaggagctgcccccaccatctctccggccccccaagcggaggcggcggaacccctcg
gagtcaggctctgagccctcttcctcacttgattcagttgaaagtggggctgctgccctt
ggaggacggggctccccttcctcccacctcattggatcagatcatggccttcggaaagcc
aaaaaaccaaaaaagaaaactaaaaagagaagacacaagtcgaacagtcctgagagtgag
acagaccccgatgagaaagctggcaaggagagtgatgagaaggaacaagaacaggacagg
gacagggagctccggcagacagagctctctaaccgctccccaggctttggcatcaagagg
gagaagacgggctgggacacgtcagaaagtgaactgagtgagggcgagctggagcggcgg
cggcggacactcctgcagcagctggatgatcaccaatga
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