Otolemur garnettii (small-eared galago): 100950599 Help Entry 100950599         CDS       T07855                                  Symbol XRN1 Name (RefSeq) 5'-3' exoribonuclease 1   KO K12618   5'-3' exoribonuclease 1 [EC:3.1.13.-] Organism oga  Otolemur garnettii (small-eared galago) Pathway oga03008   Ribosome biogenesis in eukaryotes oga03018   RNA degradation Brite KEGG Orthology (KO) [BR:oga00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     100950599 (XRN1)   09123 Folding, sorting and degradation    03018 RNA degradation     100950599 (XRN1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oga03019]     100950599 (XRN1)    03009 Ribosome biogenesis [BR:oga03009]     100950599 (XRN1)    03016 Transfer RNA biogenesis [BR:oga03016]     100950599 (XRN1)    03036 Chromosome and associated proteins [BR:oga03036]     100950599 (XRN1) Messenger RNA biogenesis [BR:oga03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      100950599 (XRN1)   mRNA degradation factors    5'-3' decay     5' exonucleases      100950599 (XRN1) Ribosome biogenesis [BR:oga03009]  Eukaryotic type   Pre-60S particles    RNases     100950599 (XRN1) Transfer RNA biogenesis [BR:oga03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     100950599 (XRN1) Chromosome and associated proteins [BR:oga03036]  Eukaryotic type   Gene silencing    piRNA pathway     100950599 (XRN1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  XRN_N XRN_M XRN1_D2_D3 XRN1_D1 SH3_12 Dicer_dimer Motif Other DBs NCBI-GeneID:  100950599 NCBI-ProteinID:  XP_023368764 Ensembl:  ENSOGAG00000000170 LinkDB All DBs Position Unknown AA seq 1667 aa AA seqDB search MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE TLPTEARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHK IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKAQRVCA PEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHL HINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKW FESKVGNKYLNEAAGVAAEEAKNYKEKKKSKGPENSICWAALEKNKGEVVTSKDNLEDET EDDDLFETEFRQYKRTYYMTKMGVDVVSDDFLANQAACYVQAIQWILHYYYHGVQSWSWY YPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQKRLLEAMEA CNHSLKKEEKKRNQHSECLMCWYDGDTEFTYPSPWPEKFPAVERCCTRYKIISLDAWRVD INKNKITKVDQKALYFCGFPTLKNIKHKFFLKKSGVQVFQQSSRGENMMLEILMNAESDE LSIENVASSVLGKSVFVNWPHLEEARVVAVSDGETKFFLEEPPGTQKLYLGRTAPPSKVV HLGDKEQSNWTKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQVNQNGDVRLEKQW SKQVVPFVYQTVVQDIRAFDSRFSNIKTLDDLFPPRSMVFMLGTPYYGCTGEVQDSGDVI TEGRIRVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRG SRRNPHGDHKANVGLNLKFNKKNEEVPGYTKKVGSEWMYSSAAEQLLAEYLERAPELFSY ISKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKI EEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVPV GLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGTRSET GNQKLTAIVKPQPAVNHYSSNSPISSGHLGGLNHSPQSLFVPAHVPAKDDDEFCNIWQSL QGSSKIQHFQSTIQEKGTVLPQEIRQVNQHHKSGFNDNNIKYQQRKHDPHRKFKEECKSP KAECQSQKISNKQTNSGIENFLVSLNISKENEVQSSHHGESPSEEHLSPQSFAMKGTRML KEILKIDGSDTVDHKKEIKQFGNEVTVSSNRRDDYRSSPQPKQNKKLASYVNKPHSVNEY HNIQSMDNVCWPAPSQIPPISTPVTELSRICSLIGMPQPDFSFLRTPQTMTVCQVKLSNG LLVHGPQCHSENEAKEKAALFALQQLGSLGVNFPLPPPVFTNYPSAISPRSITPVFPQTT GWDHYGSNLALGAANIMPSSSHLFGSMPWGPPVPVPGKPFHHALYSGTMPMAGGVPSAMH TQFIPLQVTKKRVANKKNFENKEVQSSSQATPLQTSQLESSDVTKVIPQDNSSASLKSSQ TAQAASSLQVETASQGRSVSQPKSTSSSSRRKSRKLAVNFGASKPSE NT seq 5004 nt NT seq  +upstreamnt  +downstreamnt atgggagtccccaagttttaccgatggatctcagagagatatccctgcctcagcgaagtg gtgaaagagcatcagattcctgaatttgacaacttgtacctagatatgaatggaatcata catcagtgttctcatcctaatgatgatgatgttcacttcagaatttcagatgataaaatc tttactgatatttttcactacttggaggtgttgtttcgcattattaaacctaggaaagtg ttttttatggctgttgatggtgtggctcctcgagcaaaaatgaaccagcaacgtgggagg cgttttaggtcagcaaaggaggcagaagacaaaattaaaaaggcaatagagaagggagaa actcttcctacagaggccagatttgattccaactgtattacaccaggaactgaattcatg gccaggttacatgaacatctgaagtattttgtaaatatgaaaatttctacagacaagtca tggcaaggagttaccatctacttctcaggccatgagactcctggagaaggagagcataaa atcatggaatttatcagatctgaaaaagcaaaaccagatcatgatccaaataccagacac tgtctttatggtttagatgctgacttgattatgcttggattaacaagtcacgaggcacat ttttctctcctaagagaagaagttcgatttggtggcaaaaaagcacaaagggtatgtgca ccagaagaaaccacatttcacctcctacacttgtctttaatgagagaatatattgactat gagttttcagtactaaaggaaaagatcacatttaaatatgatattgaaagaataatagat gattggattttaatgggatttcttgttggcaatgattttatccctcatctacctcatttg catattaatcatgatgcactgcctcttctttatgggacatatattaccatcctaccagaa cttgggggttacattaatgaaagtgggcatctcaacttacctcgatttgagaaatacctt gtaaaactatcagattttgatcgggagcacttcagtgaagtttttgtggacctaaagtgg tttgaaagcaaagttggtaacaagtacctcaatgaagcggcaggtgtcgcagcagaagaa gccaagaactacaaggaaaagaaaaaatcaaagggcccggaaaattctatatgttgggct gctttagaaaaaaataaaggtgaagtggtaacttctaaggataatttagaagatgagact gaagatgatgacctgtttgaaactgagtttagacaatataaaagaacatattacatgacg aagatgggagttgacgtagtatctgacgactttctggctaatcaagctgcatgttatgtt caggcaatacagtggattttgcactattactatcatggagttcagtcctggagctggtat tatccttatcattatgcacctttcctgtccgatatccgcaacatcagtacactcaagata cactttgaactaggaaaaccttttaagccttttgaacagcttcttgctgtgcttccagca gctagcaaaaatttacttcctacatgctaccagaaacgattgttggaagccatggaggca tgcaaccactccctcaaaaaggaagagaagaaaagaaatcaacatagtgaatgcctaatg tgctggtatgatggagatacagagttcacctatccttctccatggccagaaaagttccct gctgtagaacgatgttgtacaaggtacaaaataatatcattagatgcttggcgtgtggac ataaacaagaacaaaataaccaaggttgaccaaaaggcattatatttctgcggatttcct actctgaaaaacatcaaacacaaattttttttaaagaaaagtggtgttcaagtattccag caaagcagtcgtggagaaaacatgatgttagaaatcttaatgaatgcagaatcagatgaa cttagtatagaaaatgtagcttcatcagtgcttggaaaatctgtctttgttaattggcct caccttgaagaagctagagttgtggctgtatcagatggagaaacaaagtttttcttggaa gaacctccaggaacacagaagctttatttgggaagaactgctccaccatctaaagtggtc caccttggagataaagaacaatctaactggacaaaagaagtacaaggaatttcagaacac tacctaagaagaaaaggaataataataaatgaaacatctgcagttgtgtatgctcagtta ctcacaggtcgtaaataccaagtaaatcaaaatggtgacgttcgtctagagaaacagtgg tcaaaacaagttgttccttttgtttatcaaactgtagtccaggacatccgagcttttgac tctcgtttctccaacatcaaaacattggatgatttgtttcctcctagaagtatggttttt atgctgggaaccccctattatggctgcactggagaagttcaagattcaggtgatgtgatt acagaaggtaggattcgtgtggttttcagcattccatgtgaacccaatcttgatgcttta atacagaaccaacataaatattctataaagtacaacccaggatatgtgttggccagtcgc cttggagtgagtggataccttgtttcaaggtttacaggaagtatttttattggaagagga tctaggagaaaccctcatggagaccataaagcaaatgtgggtttaaatctcaaattcaac aaaaaaaatgaagaggtacctggatatactaagaaagttggaagcgaatggatgtattca tctgcagcagaacaacttcttgcagaatacttagagagagctccagaactatttagttat atatccaaaaacagccaagaagatgttttctatgaagatgatatctggcctggagaaaat gagaatggtgctgagaaagtacaagaaattattacttggctaaaaggacatcctgtcagt actttatctcgttcttcttgtgatttacaaattctggatgcagctattgttgagaaaatt gaggaagaagttgaaaagtgcaagcaaagaaagaataataagaaggtacgagtaactgtg aagcctcatttgctgtacagacctttagaacagcaacatggagtcattcctgatcgggat gcagaatttcgtctcttcgatcgtgttgtaaatgtgagagagaacttctcagttccagtt ggccttcggggcaccatcataggaattaaaggagctaatagagaagctgatgtactattt gaagtattatttgatgaagaatttcctggaggcctaacaataagatgctcaccaggtaga ggttatcgactaccaacaagtgccttggtgaacctttctcacgggactcgctctgaaact ggaaatcagaagttgacagccattgtgaaaccacaaccagctgtgaatcactatagctca aattcaccaatttcgtctggacatctgggaggcctcaaccattcccctcagtcacttttt gttcctgctcatgtacctgctaaagatgatgatgaattttgcaacatttggcaatcctta cagggatccagtaaaattcagcactttcagtcaactatacaagagaagggtacagttcta cctcaagaaataagacaagtaaatcaacatcataaatctggctttaatgacaacaacatt aaataccagcaaagaaaacatgaccctcacagaaaatttaaagaagaatgtaagagtcct aaagctgaatgtcagtcacaaaaaatatctaataagcagactaactctggaattgagaac tttttagtatccttgaatatctccaaagaaaatgaagtacagtcatctcatcatggagag tctccaagtgaagagcatttatcgccacagtcatttgctatgaagggaacgcggatgctt aaagaaattctaaaaattgatggctctgatactgtggaccacaaaaaggaaatcaaacaa tttggtaatgaagtcactgtttcttctaatagaagagatgactatagatcatccccacag cctaaacaaaataagaaattagcatcttatgtgaacaagcctcacagtgttaatgagtac cataatattcaatccatggacaatgtgtgttggcctgctcccagccagatccctcctata tccacaccagtcactgaactttctcgaatttgttcgcttattggaatgccacaaccagat ttctcctttcttaggacaccacagacaatgactgtttgccaggtaaaattatctaatggc ttactggtacatggaccacagtgccactctgaaaatgaagccaaggagaaagctgcactt tttgctttacaacaattgggctcattaggagtgaatttccctttgcctccaccagtgttt acaaattatccttctgccatatcacccagaagcattactccagttttcccccaaactact ggctgggatcactatggaagcaacttagcattgggggcagctaatataatgccttcatcg tctcatctctttggctccatgccatggggaccaccagtaccagttcctgggaagcccttc catcatgcgttatattctgggaccatgcccatggctgggggagtgccaagtgctatgcac actcagttcatacctctgcaggttactaaaaaaagggttgcaaacaaaaagaactttgag aacaaggaggtccagagttcttctcaagccaccccacttcagactagccagctagagtct tctgatgtcaccaaagtaattccacaggacaattcatcagcttccttaaagtcctctcag actgcccaggctgcatcttctttacaagttgaaactgcttctcaaggccgtagtgtgtct cagcctaagtcaacatcaagctcttcaagaagaaaatcaagaaaactggctgtcaatttt ggcgcttctaaaccttctgaataa

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