Otolemur garnettii (small-eared galago): 100950977
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Entry
100950977 CDS
T07855
Symbol
COL4A2
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga04151
PI3K-Akt signaling pathway
oga04382
Cornified envelope formation
oga04510
Focal adhesion
oga04512
ECM-receptor interaction
oga04820
Cytoskeleton in muscle cells
oga04926
Relaxin signaling pathway
oga04933
AGE-RAGE signaling pathway in diabetic complications
oga04974
Protein digestion and absorption
oga05146
Amoebiasis
oga05165
Human papillomavirus infection
oga05200
Pathways in cancer
oga05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100950977 (COL4A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100950977 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100950977 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100950977 (COL4A2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
100950977 (COL4A2)
09154 Digestive system
04974 Protein digestion and absorption
100950977 (COL4A2)
09158 Development and regeneration
04382 Cornified envelope formation
100950977 (COL4A2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100950977 (COL4A2)
09162 Cancer: specific types
05222 Small cell lung cancer
100950977 (COL4A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100950977 (COL4A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
100950977 (COL4A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100950977 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oga04147
]
100950977 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
oga00536
]
100950977 (COL4A2)
Exosome [BR:
oga04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100950977 (COL4A2)
Glycosaminoglycan binding proteins [BR:
oga00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100950977 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100950977
NCBI-ProteinID:
XP_023374962
Ensembl:
ENSOGAG00000010162
LinkDB
All DBs
Position
Unknown
AA seq
1669 aa
AA seq
DB search
MGRDQCAASGPALPRWLLLTVTAGVLAQSVLAGVKKFDVPCGGRDCSGGCQCYPEKGGRG
QPGPVGPQGYTGPSGLQGFPGLQGRKGDKGERGAPGITGPKGDVGARGVSGFPGADGIPG
HPGQGGPRGRPGYDGCNGTRGDTGPQGPYGSDGFPGLQGPQGPKGQKGEPYALSEEDRDR
YRGESGEPGVVGFQGPPGRPGPVGPMGPVGAPGRPGPPGPPGPKGQPVSWLLGXGGGEGT
XGDVGQPGPNGIPSENLHHPIVGPTKTTFLPDQYKGEKGSRGEPGIKGISLKGEEGTTGF
SGARGAPGFDGEKGPPGQKGSRGLDGFQGPDGPRGPKGQAGDPGPPGPPAYSPHPSLAKG
ARGDPGFPGSHGEPGSRGEQGDPGPPGRPGISIGDEDVKRGLPGEMGPKGFVGDPGIPAR
YPGPPGADGKPGLPGLPGPAGEPGPDGFLFGLKGAEGRAGFPGPSGFPGTRGQKGWKGDS
GDCRCEGDAFVPGLPGLPGPKGFPGVNGEPGRKGEPGDPGPHGNPGFPGFKGTPGNIGVP
GPKGAKGDSRTITTKGERGQPGIPGVPGMKGDDGPTGRDGLDGFPGLPGPPGDGIKGPPG
DQGYPGAPGTKGLPGDVGPPGLGLPGPKGERGFPGDAGLPGPPGFLGPPGPPGTPGQIDC
DPGVKRPIGKDGQETIQPGCIGGPKGLPGLPGPPGLTGTKGLRGIPGFPGADGAPGLKGF
PGDPGREGFPGPPGFVGPRGSKGAMGLPGPDGSPGPIGLPGPAGPPGDRGLPGEVLGAQP
GSRGDAGLPGHPGLKGLPGDRGHPGFRGSQGMPGMPGLKGQLGFPGPSGQPGLPGPPGQH
GFPGLPGQEGPLGLPGAPGFGGLPGDRGEPGDTGVPGPVGMKGVSGDRGEAGLPGERGHP
GSPGFKGMVGMPGTPGLKGDRGSPGMDGFQGMPGLKGRSGFPGSKGEPGFFGVPGLKGLA
GEPGVKGSRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGVKGIQGMPGIPGLSG
IPGLPGRPGYIKGAKGDIGIAGVPGLPGLPGLSGPPGIAGFPGFTGSRGEKGALGRTGLY
GEVGATGDFGDIGDTVDLPGRPGLKGERGSAGTSGPKGFFGEKGTEGDIGFPGITGMPGV
QGPPGQKGQTGFPGLTGLQGPQGEPGRIGLPGSKGDDGWPGVPGLPGFPGSRGIGGLHGL
PGTKGLPGSPGARGPAGSPGLQGFPGITPPSNISGPPGDKGAPGIFGLEGYQGRPGAPGP
AALPGTKGDVGNPGAPGVPGTKGWVGDPGPQGRPGVFGLPGEKGPRGEQGLMGSTGATGT
VGDRGPRGPKGDPGYPGAPGPAGSPGIAGVPPRIAVQPGTVGPQGRRGLPGAQGEMGPQG
PPGDPGLRGAPGKAGPQGRGGVSAVPGFRGDQGPVGHQGPIGQEGAPGRPGSPGLPGMPG
RSVSIGYLLVKHSQTEQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFST
MPFLYCNPGDVCYYASRNDKSYWLSTTAPLPMMPVAEDDIKPYISRCSVCEAPAVAIAVH
SQDVSIPHCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRG
TCHYYANKYSFWLTTIPEQSFQGSPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atgggaagagaccagtgcgccgcgtccggccctgccctgccacggtggctgctgctgacg
gtgacagcgggggtcctggcccagagcgtcttggcgggtgtgaagaagtttgatgtgccc
tgtggagggagagactgcagtgggggctgccaatgctatcctgagaaaggcgggcggggt
cagcccgggccagtgggccctcagggctacaccgggccctcgggcctgcaaggattccca
ggactgcagggacgcaaaggtgacaaaggtgaacgaggagctcccggaataacaggaccg
aaaggagacgtgggagcgagaggcgtttctggattccctggtgctgatggaattcccggt
catcccgggcaggggggtcccagaggaaggcccggctatgatggctgcaacggaaccagg
ggtgacacaggtccacagggaccctatggctctgatggcttccctggacttcagggaccc
caaggacccaaagggcagaaaggcgagccttacgcactgtctgaagaggaccgggaccga
tacaggggtgaatctggagagcctggagtagttggtttccaggggccgcctggccgccct
gggcctgtggggccgatgggcccagtgggagctccgggaagaccaggaccacccggaccc
cctggaccaaaaggacagcccgtaagttggttgctgggatgagggggaggggaggggact
tgaggtgacgtaggacagcctggacccaatgggatcccatcagagaacctccaccacccc
atagtggggcccacgaagaccaccttcctcccagaccagtacaaaggtgagaaaggcagt
aggggagaaccagggataaagggcatttccttgaagggagaagaaggaaccacgggcttc
tcaggagcaaggggtgcccccggctttgatggtgaaaaaggacccccaggacagaaagga
agcagaggcctggatggttttcaaggccctgatggacccagaggacccaagggacaagca
ggtgacccaggacccccaggaccacctgcctactcgccacatccttccctggcaaaaggt
gccagaggtgacccaggattcccggggtcccatggggagcctggaagccggggtgagcag
ggagacccaggccctccaggccgccctggcatttccatcggagatgaagatgtgaagagg
ggcctgcccggcgagatgggacccaaaggctttgtaggagacccaggcatccccgcacgc
tacccaggcccacccggagcagatggaaagccagggctcccaggacttcctgggcctgct
ggagaacctggacccgatgggttcctgtttggcctcaaaggagcagaaggaagagcaggc
ttccctgggccctctggctttcctgggacccgaggacagaagggctggaaaggtgactct
ggggactgcagatgtgaaggtgatgcatttgtcccgggccttcctggactgcccggaccc
aagggcttccccggtgtcaatggggagcctggaaggaaaggagagccaggcgaccctgga
ccgcacggcaaccccgggttcccagggttcaagggaacccctggcaatatcggtgttcct
gggcccaaaggagccaagggagattccagaacaatcacaaccaaaggtgagcggggacag
ccaggcatcccgggtgtgccggggatgaaaggtgacgatggccctacaggacgcgacggg
ctggatggatttcctggcctcccgggccctcccggtgatggcatcaaaggccccccaggg
gaccagggctatccaggagcacccgggaccaagggccttccaggagatgtggggcctcca
ggactgggtttaccgggcccgaaaggcgaacgcggcttccctggagatgctggattgcca
gggccaccaggcttcctgggacctcctgggccccccggcaccccaggacaaatagattgt
gaccctggtgtgaaaaggcccatcggaaaggatggacaagagaccatccagccaggttgc
attggagggcccaagggactgcccggactgccaggacccccaggcctcacaggtaccaaa
ggcctcagagggataccaggattcccaggagccgatggagcaccagggctcaagggcttt
ccaggagatccaggtcgtgaagggttcccaggacccccagggttcgtgggaccccgagga
tccaaaggtgcaatgggccttcctggcccagatggatccccaggtcccattggtctgccg
gggccagccgggcccccaggggacaggggccttcctggagaagtcctgggagcccagccc
gggtctcgaggagacgcaggactgcccggacaccctgggctaaaaggcctccctggagac
agagggcatccaggattccgagggagccaggggatgccaggaatgccgggattgaagggc
cagctgggcttccccggaccttccggccagccaggactgcccgggcctccaggacaacat
ggattccccggacttcctggccaagagggacccttggggctgccaggtgcccctggtttt
ggaggtcttcctggggaccgaggggagcccggggacacaggtgtccccggcccggtgggc
atgaaaggagtctctggtgacagaggagaggccgggctgcctggcgagcgaggccatcca
ggaagcccaggattcaagggaatggtcgggatgcctggcacccctgggctgaaaggagac
agaggctcccctgggatggatggtttccaaggcatgcctggactcaaaggaagatctggg
tttccaggaagcaaaggggagcctggattttttggagttcccggtctgaagggtctggct
ggcgagccaggtgttaaaggcagccgaggggaccccggccccccaggaccacctcccatc
atcttgccaggaatgaaagacattaaaggggagaaaggagatgaagggcccatggggctg
aagggttacctgggcgtgaaaggtatccaaggaatgccggggatccctgggctgtcagga
atccctgggctacctgggaggcccggctacatcaaaggagccaaaggtgacatcggcatt
gccggcgtacccggcctgccaggattgcctgggctgagtggcccccctggaatcgcaggg
ttcccagggttcacaggaagccggggtgagaagggtgctctggggagaacaggcctttac
ggcgaagtcggtgctactggtgattttggtgatattggggacactgtggacttaccgggg
cggccaggcctgaagggcgaacgtggcagtgctgggacatcaggtccaaagggattcttt
ggagagaagggcacggagggtgacatcggctttcctgggataacaggcatgcctggagtt
caaggccctccagggcagaaaggacagacaggcttcccagggctgacagggctgcagggg
ccgcaaggagagcctggccggattggactgcctggcagcaagggtgacgacggctggccc
ggggtgcctggcctaccaggtttccccggaagccgagggatcggtgggttacacggcttg
ccaggcaccaaaggccttccaggatccccaggggcgcgaggcccagctgggagtccagga
cttcaggggttccctggcatcacacccccgtccaacatctctgggccaccaggagacaaa
ggggcgccaggcatatttggcctggaagggtaccaaggccgcccaggggcaccggggcct
gctgctcttcctggaaccaaaggagacgtgggaaaccccggagctcccggagtcccaggg
accaaaggatgggttggggacccagggccccagggaaggcctggcgtgtttggcctccca
ggggagaaagggcccaggggtgagcagggactcatgggcagcactggagccaccgggact
gtgggtgacagaggccccaggggacccaaaggagacccaggataccctggtgcacctggc
cctgcaggatctccagggattgcaggagtccccccaaggatcgcggtgcagcctgggaca
gtgggtccccaagggaggagaggtcttccgggggcacagggcgagatggggccccagggc
ccccctggagacccaggtctccgtggggccccagggaaggccgggccccagggaagaggc
ggtgtgtctgcagttccaggcttccgtggggatcaagggcctgtggggcaccaggggcca
attggccaagaaggtgcaccgggccgcccagggagcccgggcctgccggggatgccaggc
cgcagcgtcagcatcggctacctcctggtgaagcacagccagacggagcaggagcccatg
tgccccgtgggcatgaacaaactgtggagcggctacagcctgctgtacttcgaaggccag
gagaaggcccacaaccaggacttggggctggcgggctcctgcctggcacgcttcagcacc
atgcccttcctgtactgcaaccccggcgatgtctgctactatgccagccgcaatgacaag
tcctactggctgtccaccaccgccccgctgcccatgatgcctgtggccgaggatgacatc
aagccttacatcagccgctgctctgtgtgcgaggccccggctgtcgccatcgccgtccat
agtcaggatgtgtccatcccccactgtccagccgggtggcgcagtttgtggataggatat
tccttcctcatgcacaccgcggcaggggacgaaggcggcggccagtctctggtgtcaccg
ggcagctgtctggaggacttccgcgccacgccgttcatcgagtgcaacgggggccgcggg
acctgccactactatgctaacaagtacagcttctggctgaccacgatcccagagcagagc
ttccagggctcgccctcggccgacacgctcaaggccggcctcatccggacgcacatcagc
cgctgccaggtgtgcatgaagaacctgtga
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integrated database retrieval system
