Otolemur garnettii (small-eared galago): 100952852
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Entry
100952852 CDS
T07855
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X2
KO
K23625
ataxin-2
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga05014
Amyotrophic lateral sclerosis
oga05017
Spinocerebellar ataxia
oga05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100952852 (ATXN2)
05017 Spinocerebellar ataxia
100952852 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
100952852 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oga03019
]
100952852 (ATXN2)
Messenger RNA biogenesis [BR:
oga03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100952852 (ATXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
100952852
NCBI-ProteinID:
XP_003796035
Ensembl:
ENSOGAG00000000609
UniProt:
H0WGT4
LinkDB
All DBs
Position
Unknown
AA seq
1291 aa
AA seq
DB search
MRSAAAAPRSPSAATDPHRFVPARWPGRRSFPRSARRGGGGGADLGPYPSAAPPPPGPGP
PPSRQRSPPSASDCFGSNGNGGSASGPSSQRFLGVGGPSRPFVVLLLPLVCPGAPPVAPT
RASPLGARASPPRSGVFSARPAPGCPRPACEPVYGPLIMSLKPQQQQQAPAAANVRKPGG
GLLTSPAAPPSVSSSSVSSSSAAATSSVAAANAGGGRPGLGRGRNSSKGLPQSTISFDGI
YANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKRE
EIMESILFKCSDFVVVQFKDMDSSYARRDAFTDSAISAKVNGEHKEKDLEPWDAGELTTN
EEMEALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARAN
QLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNSSEREGHNINTRENKYIPPGQRNRE
VISWGSGRQNSPRMGQPGSGSMPSRSTTHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSR
PPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPR
MSPKAQRHPRNHRVSAGRGSISSGLEFVSHNPPSEAATPPVARTSPSGGTWSSVVSGVPR
LSPKTHRPRSPRQNSIGNTPSGPVLASPQAGIIPTEAVAMPLPAASPTPASPASNRAVTP
SIEAKDSRLQDQRQNSPAGNKENIKPTETSPSFSKAENKGISPIVSEHRKQIDDLKKFKN
DFRLQPSSTSESMDQLLNKNREGEKSRDLIKDKIEPSAKDSFIENSSSNCTSGSSKPNSP
SMSPSILINTEHKRGPEVTSQGVQTSSPACKQEKDDKEEKKDAAEQVRKSTLNPNAKEFN
PRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLY
PIPMTPMPVNQAKTYRAVPNMPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYS
PQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPTHAQPGLVSSSATQYGAHEQTH
AMYACPKLPYNKETSPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQSQHG
GSHPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQ
QTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALA
QSALQPIPVSTTAHFPYMTHPSVQAHHQQQL
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggcggccgcagctcctcggagtccctcagcggccactgatcctcaccgcttc
gtcccagccaggtggcctgggaggcgctcgttcccgcggtcggcgcggcggggcggcggc
ggcggcgcggacctcggtccgtatccctccgccgcccctcccccgcctggccctggcccc
cctccctcccggcagcgctcgcctccctccgcctcagactgttttggtagcaacggcaac
ggcggcagtgcgtccggtcccagctcccaacgattcctcggtgtcggcgggccttcccgc
cccttcgttgtcctcctccttcccctcgtctgcccgggcgcccccccggtcgcgccaacc
cgcgcctcccctcttggcgcccgcgcgtccccgccgcgctccggcgtcttctcggcgcgc
ccagctcccggctgtcctcgcccggcgtgcgagccagtgtatgggcctctcatcatgtcg
ttgaagccccagcagcagcagcaggcgcccgcggcagcgaatgtccgcaagcccggcggc
ggccttctcacgtcgcctgccgccccgccgtcggtgtcctcgtcctcagtctcgtcgtcc
tcggccgcggctacctcctcagtggctgcagcgaacgctggcggcgggaggcctggccta
ggcagaggtcgaaacagtagcaaaggactgcctcagtctacgatttcttttgatggaatc
tatgcaaatatgaggatggttcatatacttacatcagttgttggatccaaatgtgaagta
caagtgaaaaacggaggtatatatgaaggagtttttaaaacatacagtcctaagtgtgat
ttggtacttgatgctgcacatgagaaaagtacggaatccagttcaggcccaaaacgagaa
gaaataatggagagtattttgtttaaatgttcagactttgttgtggtacaattcaaagat
atggactcgagttatgcaagaagagatgcttttactgactctgctatcagtgctaaagtg
aatggtgaacataaagagaaggacctggagccctgggatgcaggggaactcacaaccaat
gaggaaatggaagctttggaaaatgacgtgtctaatggatgggatcccaatgatatgttt
cgatataatgaagaaaattatggtgtagtgtctacatatgatagcagtttatcttcatat
acggtacccttagaaagggataactcagaagaatttttaaaacgggaagcaagggcaaac
cagttagcagaagaaattgaatcaagtgcccagtacaaagctcgggtggccctggaaaat
gatgataggagcgaggaagaaaaatacacggcagttcagagaaattccagcgaacgtgag
gggcacaacataaatactagggaaaataaatatattcctcctggacaaagaaatagagaa
gtcatatcctggggaagtgggagacagaattcaccgcgtatgggccagcctggatcaggc
tccatgccatcaagatccactactcacacttcagatttcaacccaaattctggttcagac
caaagagtagttaatggaggtgttccctggccatcgccttgcccatctccttcctctcgc
ccaccttctcgctaccagtcaggtcccaactctcttccacctcgggcagccacccctaca
cggccgccctccaggcccccctcgcggccatccagacccccgtctcacccctctgctcat
ggttctccagctcctgtctctactatgcctaaacgcatgtcttcagaagggcctcctagg
atgtccccaaaggcccagcgacaccctcgaaatcacagagtttctgccgggaggggttcc
atttccagtggcttagaatttgtatcacacaacccgccaagtgaagcagctactcctcca
gtggcaaggaccagtccctcggggggaacatggtcatcagtggtcagtggtgttccacga
ttatcccctaaaactcacagacccaggtcacccagacagaacagtattggaaatactccc
agtgggccagttcttgcttctccccaagctggaattattccaactgaagctgttgccatg
cctcttccagctgcatctcctacacctgctagtcctgcatctaacagagctgttacccca
tctattgaggctaaagattccaggcttcaagatcagaggcagaactctcctgcagggaat
aaagaaaatattaaacccactgaaacatcacctagcttctcaaaagctgaaaataaaggt
atatcaccaattgtttctgaacatagaaaacagattgacgatttaaagaaatttaagaat
gattttaggttacagccaagttctacttctgaatctatggatcaactactaaacaaaaat
agagagggagaaaaatcaagagatttgatcaaagacaaaattgaaccaagtgctaaggac
tctttcattgaaaatagcagcagcaactgtaccagtggcagcagcaaaccgaatagcccc
agcatgtccccttcaatacttattaacacagagcacaagaggggacctgaggtcacatcc
caaggggttcaaacttccagtccagcatgtaaacaagagaaggatgataaagaagagaag
aaagatgcagctgagcaagtcaggaaatcaacattgaatcccaatgcaaaggagttcaac
ccacgttccttttctcagccaaaaccttctactactccaacttcacctcggccccaagca
cagcctagcccatctatggtgggtcatcaacagccaactccagtttatactcagcctgtt
tgttttgcaccaaatatgatgtacccagtcccagtgagcccaggcgtacaacctttatac
ccaatacccatgacgcccatgccagtgaatcaagccaagacatatagagcagtaccaaat
atgccccaacagcggcaagaccagcatcatcagagcaccatgatgcacccagcctccgca
gcaggcccaccgattgtagccaccccaccagcttactccacacaatacgttgcctatagt
cctcagcagttcccaaatcagccacttgttcagcatgtgccacattatcagtctcagcat
cctcatgtctatagtcctgtaatacagggtaatgctaggatgatggcaccaccaacacac
gcccagcctggtttagtatcttcatcagctactcagtatggagctcatgagcagacgcat
gcaatgtatgcatgtcccaaattaccatacaacaaggagacaagcccttctttctacttt
gccatttccacgggctcccttgctcagcagtatgcgcaccctaacgctaccctgcaccct
catactccacatcctcagccttcagctacccccactggacagcagcaaagccaacatggt
gggagtcatcctgcacccagtcctgttcagcaccatcagcaccaggctgctcaggctctt
catctggccagtccacagcagcagtcagccatttaccacgcagggctcgcgccaacccca
ccttctatgacacctgcctctaatacgcagtcgccacagaatagtttcccaacagcacaa
cagaccgtctttacgattcatccttctcatgttcagccagcatataccaatccaccccac
atggcccacgtacctcaggctcatgtacagtcaggaatggttccttctcatccaactgcc
catgcgccaatgatgctaatgacgacacagccacccggcggtccccaggccgccctcgct
caaagtgcactacagcccattccagtctcgacaacagcgcatttcccctatatgacgcac
ccttcagtacaagcccaccaccaacagcagttgtaa
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integrated database retrieval system