Entry |
|
Symbol |
ATXN2
|
Name |
(RefSeq) ataxin-2 isoform X2
|
KO |
|
Organism |
oga Otolemur garnettii (small-eared galago)
|
Pathway |
oga05022 | Pathways of neurodegeneration - multiple diseases |
|
Brite |
KEGG Orthology (KO) [BR:oga00001]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100952852 (ATXN2)
05017 Spinocerebellar ataxia
100952852 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
100952852 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:oga03019]
100952852 (ATXN2)
Messenger RNA biogenesis [BR:oga03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100952852 (ATXN2)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
1291 aa
MRSAAAAPRSPSAATDPHRFVPARWPGRRSFPRSARRGGGGGADLGPYPSAAPPPPGPGP
PPSRQRSPPSASDCFGSNGNGGSASGPSSQRFLGVGGPSRPFVVLLLPLVCPGAPPVAPT
RASPLGARASPPRSGVFSARPAPGCPRPACEPVYGPLIMSLKPQQQQQAPAAANVRKPGG
GLLTSPAAPPSVSSSSVSSSSAAATSSVAAANAGGGRPGLGRGRNSSKGLPQSTISFDGI
YANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKRE
EIMESILFKCSDFVVVQFKDMDSSYARRDAFTDSAISAKVNGEHKEKDLEPWDAGELTTN
EEMEALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARAN
QLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNSSEREGHNINTRENKYIPPGQRNRE
VISWGSGRQNSPRMGQPGSGSMPSRSTTHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSR
PPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPR
MSPKAQRHPRNHRVSAGRGSISSGLEFVSHNPPSEAATPPVARTSPSGGTWSSVVSGVPR
LSPKTHRPRSPRQNSIGNTPSGPVLASPQAGIIPTEAVAMPLPAASPTPASPASNRAVTP
SIEAKDSRLQDQRQNSPAGNKENIKPTETSPSFSKAENKGISPIVSEHRKQIDDLKKFKN
DFRLQPSSTSESMDQLLNKNREGEKSRDLIKDKIEPSAKDSFIENSSSNCTSGSSKPNSP
SMSPSILINTEHKRGPEVTSQGVQTSSPACKQEKDDKEEKKDAAEQVRKSTLNPNAKEFN
PRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLY
PIPMTPMPVNQAKTYRAVPNMPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYS
PQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPTHAQPGLVSSSATQYGAHEQTH
AMYACPKLPYNKETSPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQSQHG
GSHPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQ
QTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALA
QSALQPIPVSTTAHFPYMTHPSVQAHHQQQL |
NT seq |
3876 nt +upstreamnt +downstreamnt
atgcgctcggcggccgcagctcctcggagtccctcagcggccactgatcctcaccgcttc
gtcccagccaggtggcctgggaggcgctcgttcccgcggtcggcgcggcggggcggcggc
ggcggcgcggacctcggtccgtatccctccgccgcccctcccccgcctggccctggcccc
cctccctcccggcagcgctcgcctccctccgcctcagactgttttggtagcaacggcaac
ggcggcagtgcgtccggtcccagctcccaacgattcctcggtgtcggcgggccttcccgc
cccttcgttgtcctcctccttcccctcgtctgcccgggcgcccccccggtcgcgccaacc
cgcgcctcccctcttggcgcccgcgcgtccccgccgcgctccggcgtcttctcggcgcgc
ccagctcccggctgtcctcgcccggcgtgcgagccagtgtatgggcctctcatcatgtcg
ttgaagccccagcagcagcagcaggcgcccgcggcagcgaatgtccgcaagcccggcggc
ggccttctcacgtcgcctgccgccccgccgtcggtgtcctcgtcctcagtctcgtcgtcc
tcggccgcggctacctcctcagtggctgcagcgaacgctggcggcgggaggcctggccta
ggcagaggtcgaaacagtagcaaaggactgcctcagtctacgatttcttttgatggaatc
tatgcaaatatgaggatggttcatatacttacatcagttgttggatccaaatgtgaagta
caagtgaaaaacggaggtatatatgaaggagtttttaaaacatacagtcctaagtgtgat
ttggtacttgatgctgcacatgagaaaagtacggaatccagttcaggcccaaaacgagaa
gaaataatggagagtattttgtttaaatgttcagactttgttgtggtacaattcaaagat
atggactcgagttatgcaagaagagatgcttttactgactctgctatcagtgctaaagtg
aatggtgaacataaagagaaggacctggagccctgggatgcaggggaactcacaaccaat
gaggaaatggaagctttggaaaatgacgtgtctaatggatgggatcccaatgatatgttt
cgatataatgaagaaaattatggtgtagtgtctacatatgatagcagtttatcttcatat
acggtacccttagaaagggataactcagaagaatttttaaaacgggaagcaagggcaaac
cagttagcagaagaaattgaatcaagtgcccagtacaaagctcgggtggccctggaaaat
gatgataggagcgaggaagaaaaatacacggcagttcagagaaattccagcgaacgtgag
gggcacaacataaatactagggaaaataaatatattcctcctggacaaagaaatagagaa
gtcatatcctggggaagtgggagacagaattcaccgcgtatgggccagcctggatcaggc
tccatgccatcaagatccactactcacacttcagatttcaacccaaattctggttcagac
caaagagtagttaatggaggtgttccctggccatcgccttgcccatctccttcctctcgc
ccaccttctcgctaccagtcaggtcccaactctcttccacctcgggcagccacccctaca
cggccgccctccaggcccccctcgcggccatccagacccccgtctcacccctctgctcat
ggttctccagctcctgtctctactatgcctaaacgcatgtcttcagaagggcctcctagg
atgtccccaaaggcccagcgacaccctcgaaatcacagagtttctgccgggaggggttcc
atttccagtggcttagaatttgtatcacacaacccgccaagtgaagcagctactcctcca
gtggcaaggaccagtccctcggggggaacatggtcatcagtggtcagtggtgttccacga
ttatcccctaaaactcacagacccaggtcacccagacagaacagtattggaaatactccc
agtgggccagttcttgcttctccccaagctggaattattccaactgaagctgttgccatg
cctcttccagctgcatctcctacacctgctagtcctgcatctaacagagctgttacccca
tctattgaggctaaagattccaggcttcaagatcagaggcagaactctcctgcagggaat
aaagaaaatattaaacccactgaaacatcacctagcttctcaaaagctgaaaataaaggt
atatcaccaattgtttctgaacatagaaaacagattgacgatttaaagaaatttaagaat
gattttaggttacagccaagttctacttctgaatctatggatcaactactaaacaaaaat
agagagggagaaaaatcaagagatttgatcaaagacaaaattgaaccaagtgctaaggac
tctttcattgaaaatagcagcagcaactgtaccagtggcagcagcaaaccgaatagcccc
agcatgtccccttcaatacttattaacacagagcacaagaggggacctgaggtcacatcc
caaggggttcaaacttccagtccagcatgtaaacaagagaaggatgataaagaagagaag
aaagatgcagctgagcaagtcaggaaatcaacattgaatcccaatgcaaaggagttcaac
ccacgttccttttctcagccaaaaccttctactactccaacttcacctcggccccaagca
cagcctagcccatctatggtgggtcatcaacagccaactccagtttatactcagcctgtt
tgttttgcaccaaatatgatgtacccagtcccagtgagcccaggcgtacaacctttatac
ccaatacccatgacgcccatgccagtgaatcaagccaagacatatagagcagtaccaaat
atgccccaacagcggcaagaccagcatcatcagagcaccatgatgcacccagcctccgca
gcaggcccaccgattgtagccaccccaccagcttactccacacaatacgttgcctatagt
cctcagcagttcccaaatcagccacttgttcagcatgtgccacattatcagtctcagcat
cctcatgtctatagtcctgtaatacagggtaatgctaggatgatggcaccaccaacacac
gcccagcctggtttagtatcttcatcagctactcagtatggagctcatgagcagacgcat
gcaatgtatgcatgtcccaaattaccatacaacaaggagacaagcccttctttctacttt
gccatttccacgggctcccttgctcagcagtatgcgcaccctaacgctaccctgcaccct
catactccacatcctcagccttcagctacccccactggacagcagcaaagccaacatggt
gggagtcatcctgcacccagtcctgttcagcaccatcagcaccaggctgctcaggctctt
catctggccagtccacagcagcagtcagccatttaccacgcagggctcgcgccaacccca
ccttctatgacacctgcctctaatacgcagtcgccacagaatagtttcccaacagcacaa
cagaccgtctttacgattcatccttctcatgttcagccagcatataccaatccaccccac
atggcccacgtacctcaggctcatgtacagtcaggaatggttccttctcatccaactgcc
catgcgccaatgatgctaatgacgacacagccacccggcggtccccaggccgccctcgct
caaagtgcactacagcccattccagtctcgacaacagcgcatttcccctatatgacgcac
ccttcagtacaagcccaccaccaacagcagttgtaa |