Otolemur garnettii (small-eared galago): 100953390
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Entry
100953390 CDS
T07855
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100953390 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oga03036
]
100953390 (SMARCAD1)
Chromosome and associated proteins [BR:
oga03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100953390 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ERCC3_RAD25_C
CUE
TTC3_9th
LA-virus_coat
Pox_D5
Motif
Other DBs
NCBI-GeneID:
100953390
NCBI-ProteinID:
XP_012666009
Ensembl:
ENSOGAG00000011444
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MNLFNLDRFRFEKRNKSEETPEATPQPSQPGPSSPISLSAEEENAEGEVSRANTPDSDIT
EKTEDSSVPETPDNERKASISYFKNQRGIQYIDLSSDSEDVVSPDCSNTVQEKKFNKDTV
IIVSEPSEDEESQGLPAMARRNNDDISELEDLSELEDLKDAKLQTLKELFPQRSDSDLIK
LIESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDDFDDQSLKKTRLDHGEESN
ESAESSSNWEKQESIVLKLQKEFPHFDKQELREVLKEHEWMYTEALESLKVFAEDQDMQY
ASQSEVPNGKDVSSRSQNYPKNAAKTKLKQKFSMKPQNGFNKKRKKNVFNPKRVVEDSEY
DSGSDAGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELRP
FNCWETLFTKMSKTNGLSEDLIWNCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTGNG
SGWNVEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLY
QQGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVI
VTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPV
QNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFIL
RRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNLEKNTEMCNVMMQLRK
MANHPLLHRQYYTAEKLKEMAQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRHI
NDFQLDMDLILDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRL
DGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAE
DRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTXXAGDEGNMPADIATLL
KTSMGL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacctggaccgttttcgctttgagaaaaggaataagagtgaggaaact
cctgaagcaacccctcaaccttcccagcctggcccttcatcaccaatttctcttagtgct
gaagaggagaatgctgaaggggaagttagcagggcaaacactccagattcagatataact
gaaaaaacagaggattctagtgttccagaaactccagacaatgaaagaaaagcaagtata
tcatatttcaagaatcaaagaggaatacagtatattgatttgtcttctgatagtgaagat
gttgtttccccagattgctctaatacagttcaagagaaaaagtttaacaaggacacagtg
attatagtttctgagccatctgaagatgaagagtcccagggccttccagccatggcacgt
agaaataatgatgatatttcagaattggaagacctctcggagttggaggatcttaaggat
gctaagcttcagactttgaaggaactttttccacaaagaagtgacagtgatttaattaag
ttgattgaatcaacgagcactatggatggagcaattgctgctgccttgctgatgtttggt
gatgcaggtggtgggccaaggaaaagaaaattatcatcttcttcagagccatatgaggaa
gatgactttgatgatcaatctctaaaaaagacaagactggatcatggagaagaatcaaat
gagtctgcagaatctagcagtaattgggaaaagcaggaaagtattgttttgaaattacaa
aaggaatttccccattttgataaacaggaactaagagaagtactcaaggaacatgaatgg
atgtatacagaagctttagaatctctaaaagtgtttgcagaagaccaagatatgcaatat
gcgtcacaaagtgaggttccaaatggaaaagacgtttcttcaagaagtcagaattatcct
aaaaatgcagctaaaacaaaactaaaacagaaattttccatgaaaccacaaaatggtttt
aacaagaaacgtaaaaaaaatgtctttaatccaaagagagtcgtggaagactctgagtat
gattcaggttctgatgctggtagttcactagatgaggactatagtagtggtgaagaagtg
atggaggatggctataaaggtaaaattcttcacttccttcaggatgcttcaattggtgaa
cttactttgattcctcagtgttctcagaaaaaggctcagaagataacagaactccggccc
tttaattgttgggaaactctgttcacaaagatgtccaaaactaatggcttatcagaagat
ttgatatggaactgtaaaacactgatccaagaaagggatgtagtgatcaggcttatgaac
aaatgtgaagacatttcaaataaactgaccaaacaagtcaccatgctcactggaaatgga
agtggatggaacgtagaacagccgtcgattctaaaccaaagtttgtcactcaagccctat
cagaaggttggtttgaattggctggcattggtacataaacatggacttaatggcattttg
gcagatgagatgggcctcggaaaaactattcaagccattgcatttctggcatacctctat
caacagggtaataatggtcctcatttgatcgttgttccagcctccaccatagataactgg
ttaagggaagttaatttatggtgccccactttaaaggtgctctgttactatggttctcaa
gaagaacgtaaacaaattcgattcaacattcatagtagatacgaagattacaatgtaatt
gtgaccacgtataactgtgcaattagcagttcggatgaccgtagtctgtttcgacggcta
aaacttaattatgcaatttttgatgagggccatatgctgaagaacatgggctccatccga
taccagcaccttatgacaattaatgccaataaccgtttgctgctcacaggcacaccagta
cagaataatctgttagaactcatgtcgctgttgaattttgttatgccacacatgtttagt
agtagcaccagtgaaatacgaagaatgttttcttctaaaacgaaatcagcagatgagcaa
agcatatatgaaaaggagagaatagcacatgcaaaacaaattataaagccatttattctc
agaagagtgaaagaagaggttctcaaacagctgccccccaagaaggatcaaatcgagttg
tgtgcaatgtcagagaagcaggagcagctttatttgggtcttttcaacagattgaagaaa
tccatcaacaacttggaaaaaaacacagagatgtgtaacgtcatgatgcagctgagaaaa
atggccaatcatcctttattacatcgccaatattacacagctgaaaaactcaaggaaatg
gctcagcttatgctgaaggaacctacacattgcgaagctaaccctgacctgatctttgaa
gatatggaagttatgacagactttgaactacatgtactttgtaaacagtatcgacacatt
aatgacttccagttagacatggatttgattttagattctggaaaatttcgagctttagga
tgcatcttgtccgaattaaaacagaagggtgatagagttgtattatttagccagtttacc
atgatgctggatattttagaggtactcttaaaacatcatcagcataggtacctcagatta
gatggaaagactcagatttctgaaaggattcatctaattgatgagtttaataccgatatg
gatatctttgtatttctgctatcaactaaagctggtggactggggataaatctgacctca
gcaaatgttgttatacttcatgatattgattgtaatccttataatgacaaacaagcagaa
gatagatgccatcgagtagggcagactaaagaagtgctagttataaaattaataagccaa
gggactattgaagaatctatgctaaaaattaaccaacagaaactgaaactagaacaagat
atgaccacagnnnttgcaggtgatgaggggaatatgccagcggatatagccacgttacta
aagacatcaatgggcctgtga
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