Otolemur garnettii (small-eared galago): 100953405
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Entry
100953405 CDS
T07855
Symbol
SMARCA2
Name
(RefSeq) LOW QUALITY PROTEIN: probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03082
ATP-dependent chromatin remodeling
oga04714
Thermogenesis
oga05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100953405 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100953405 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100953405 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oga03021
]
100953405 (SMARCA2)
03036 Chromosome and associated proteins [BR:
oga03036
]
100953405 (SMARCA2)
Transcription machinery [BR:
oga03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100953405 (SMARCA2)
Chromosome and associated proteins [BR:
oga03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
100953405 (SMARCA2)
Chromatin remodeling factors
BAF complex
100953405 (SMARCA2)
PBAF complex
100953405 (SMARCA2)
GBAF(ncBAF) complex
100953405 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
100953405
NCBI-ProteinID:
XP_023364918
Ensembl:
ENSOGAG00000017053
LinkDB
All DBs
Position
Unknown
AA seq
1578 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM
GSADFPQEGMHQLHKPIDGMHDKGIGEDIHCGSMKGAGMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGPLIPGDPQAMSQPNKGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQPQQQPPPQPQPQQ
QQPALVNYSRPSGPGPAELSGPSTPQKLPVPAPXXXXXXXXAAQPPAAAVPGPSVPQPAP
GQPSPILQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDL
RTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKL
EKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQK
KETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQA
AKEKKKRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAP
KASQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKILLDPNSEEVSEK
DAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGL
EWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEF
DKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDE
GHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQW
FNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSA
LQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEH
LGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFL
YLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQ
DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHE
RRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKP
RLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDG
NLEEMEEEVRLKKRKRRRNVDKDPAKDDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIID
TVINYKDRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKI
KERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEES
EDESNEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPVVSDFDS
DEEQDEHEQSEASGTDDE
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccacagaccctggagcgatgccccacccagggccttcgccagggcccgga
ccttcccctggaccaatacttggacctagtccaggaccaggaccatccccaggttctgtc
cacagtatgatggggcccagtcctggacctccgagcgtctcgcatcctatgccgacaatg
gggtctgcagacttcccacaggaaggcatgcatcaattgcataagcccatcgatggtatg
cacgacaaggggattggagaagatatccactgtggatccatgaagggcgccggtatgcga
ccgcctcacccaggcatgggtcctccccagagtccgatggatcagcacagccagggttat
atgtcaccgcacccatctccactgggagccccggagcacgtctccagcccgatgtctgga
ggaggcccaacccctccccagatgccaccaagccagcccgggcccctcattccaggcgat
ccgcaggccatgagccagcccaacaaaggtccctcgcctttcagccccgtccagctgcat
cagcttcgagctcagattttagcttacaaaatgctggcccggggccaacccctccccgaa
acactgcagcttgcagtccaggggaaaaggacgttgcctggcatgcagcagcagcagcag
caacagcagcagcagcagcagccacagcagcagccgccaccacaaccacagccgcagcag
cagcagccggcccttgttaactacagcaggccatctggcccggggccggcggagctgagc
ggcccgagcaccccgcagaagctgccggtgcccgcgcccnnnnnnnnnnnnnnnnnnnnn
ncagccgcgcagccgcccgcggccgccgtgccggggccctcggtgccgcagccggccccg
gggcagccctcgcccatcctgcagctgcagcagaagcagagccgcatcagccccatccag
aaaccgcaaggcctggacccggtggagatcctgcaggagcgggagtacagacttcaggct
cgcatagctcataggatacaagaactggaaaatctgcctggctctttgccgccagattta
cgaaccaaagcaaccgtggaactgaaagcacttcggttactcaatttccaacgtcagctg
aggcaggaggtggtggcctgcatgcgcagggacacaaccctggagacagctctcaactcc
aaagcctacaaaaggagcaagcgccagactctgagagaagctcgcatgactgagaagctg
gagaagcagcagaagatcgagcaggaaaggaaacgccggcagaaacaccaggaatacctg
aacagcattttgcaacatgcaaaagattttaaggaataccatcggtccgtggctgggaag
atccagaagctttccaaagcagtggcaacttggcacgccaacactgaaagggagcagaag
aaggagacagagaggatcgaaaaggagagaatgaggagactgatggccgaagatgaagag
ggctatagaaagctgattgatcaaaagaaggacaggcgtttagcctaccttttgcagcag
actgatgagtacgtggctaacctgaccaacctggtttgggagcacaagcaagcccaagcg
gccaaagagaagaagaagaggaggaggaggaagaagaaggctgaagagaatgcagaaggt
ggagagtctgccctgggaccagatggagagcccatagatgagagcagtcaaatgagcgac
ctccccgtcaaagtgactcacacagaaaccggcaaggtcctatttggaccagaagcaccc
aaagccagccagctggatgcctggttggaaatgaatcctggttacgaggttgctcccaga
tccgacagtgaagagagtgattctgattatgaggaggaggatgaggaagaagagtccagc
aggcaggagactgaagagaaaatacttttggatccaaatagcgaagaagtttccgagaag
gacgctaagcagatcatcgagaccgcgaagcaagatgtggacgatgagtacagcatgcag
tacagcgccaggggctcccagtcctactacaccgtggctcacgccatctccgagcgcgtg
gagaagcagtctgccctcctcattaacgggaccctaaagcattaccagctccagggcctg
gaatggatggtttccttgtataataacaatttgaacggaatcttagctgatgaaatgggg
ctaggaaagaccatacagaccattgcactcatcacttatctgatggagcacaaaagactc
aatggcccctatctcatcattgttcccctttcgactctgtctaactggacatatgaattt
gacaaatgggctccttctgtggtgaagatttcttacaagggaactcctgccatgcgtcgc
tctcttgtcccccagctacggagtggcaaattcaacgtcctgttgactacttacgagtac
attataaaagacaagcacattcttgcaaagattcggtggaaatatatgatagtggacgaa
ggccatcgaatgaagaatcaccactgcaagctgactcaggtcttgaacactcactatgtg
gccccccgaaggatcctcttgactgggaccccactgcagaataagctccctgaactctgg
gccctgctcaacttcctcctccccacaattttcaagagctgcagcacattcgagcagtgg
tttaatgctccatttgccatgaccggtgaaagggtggacttaaatgaagaagaaactata
ttgatcattaggcgtctacataaggtgttgagaccgtttttactgagaagactgaagaaa
gaagttgaatcacagcttccagaaaaagtggaatatgtgatcaagtgtgacatgtcagct
ctgcagaagattctgtatcgccacatgcaagccaaggggatcctcctcacagatggctct
gagaaagacaagaagggaaaaggaggcgctaagacacttatgaacactatcatgcagctg
agaaagatctgcaaccacccgtacatgttccagcacatcgaggaatcctttgctgaacac
ctgggctattcaaatggagtcatcaatggggccgagctgtatcgggcctcaggaaagttt
gagctacttgatcgtattctgcccaaattgagagctactaatcaccgcgtgctgcttttc
tgccagatgacatctctcatgaccatcatggaggattactttgcttttcggaacttcctt
tacctgcgccttgacggtaccaccaagtctgaagatcgcgccgctttgctgaagaagttc
aatgaacctgggtctcagtatttcattttcttgctgagcacaagggctggaggcctgggc
ttgaatcttcaggcagctgacacagtggtcatcttcgacagcgactggaatcctcatcag
gatctgcaggcccaagaccgagcccaccgcatcgggcagcagaacgaggtccgggtgctg
cgtctgtgcacggtcaacagcgtagaggaaaagatccttgcggccgcaaaatacaagctg
aacgtggatcagaaagtgatccaggcgggcatgtttgaccaaaagtcttcaagccacgag
cggagggcgttcctgcaggccatactggaacacgaagaggaaaatgaggaagaagatgaa
gtaccggacgatgagacactgaaccaaatgattgctcgaagagaagaagaatttgatctt
tttatgcgtatggacatggaccggcggagggaagacgcccggaatccaaagcgcaagccc
cgtctaatggaagaagatgagctgccctcctggattattaaggatgacgctgaagtagaa
aggcttacgtgtgaagaagaggaagagaagatatttgggagggggtctcgccagcgccgg
gacgtggactacagcgatgccctcacagagaagcagtggctaagggccatcgaagacggc
aatttggaagaaatggaagaggaagtacggcttaaaaaacgaaaacgacgaagaaatgtg
gacaaagatcctgccaaagacgatgtggagaaggctaagaagagaagaggccgcccacca
gctgagaaactgtcacccaatccccccaaactgacaaagcagatgaacgctatcatagat
accgtgataaactacaaggacaggtgtaacgtggagaaggtgcccagtaattctcagttg
gaaatagaaggaaacagttcagggcgacagctcagtgaagtcttcattcagttaccttca
aggaaagaattaccagaatactatgaattaattaggaagccagtggatttcaaaaagata
aaggaaagaatccgcaaccataagtaccggagcctcggcgacctagagaaggacgtcatg
cttctctgtcacaacgctcagacgttcaacttggaggggtctcagatctacgaagactcc
atcgtcttacagtcagtgtttaagagtgcccggcagaaaattgccaaagaggaagagagt
gaggatgagagcaacgaagaggaggaagaggaggatgaagaagagtcagagtctgaggca
aaatctgttaaggtgaaaatcaagctcaataaaaaagacgagaaaggccgggacaaagga
aaaggcaagaaaaggccaaatcgaggaaaagccaaacctgtagtgagtgattttgacagc
gacgaggagcaggacgaacacgaacaatcagaagcaagcgggactgatgatgagtga
DBGET
integrated database retrieval system
