Otolemur garnettii (small-eared galago): 100953468
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Entry
100953468 CDS
T07855
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
oga
Otolemur garnettii (small-eared galago)
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oga04515
]
100953468 (CLSTN1)
Cell adhesion molecules [BR:
oga04515
]
Cadherins
Cadherin related
100953468 (CLSTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
Toxin_R_bind_N
EphA2_TM
V_ATPase_I
Glyco_hydro_16
Cadherin_C_2
SID-1_RNA_chan
PFF1_TM
SMP_2
Zip
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
100953468
NCBI-ProteinID:
XP_023370932
Ensembl:
ENSOGAG00000015293
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MLRRPAPALAPAAWLLLAGLLSGGGVWATRVNKHKPWLEPTYHGIVTENDDTVLLDPPLI
ALDKDAPLHFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKSTGEGVIRSKEKLDCEL
QKDYSFTIQAYDCGKGPDGTNVKKSHKATVHIQVNDVNEYAPVFKEKSYKATVTEGKPSD
SILRVEAVDADCSPQFSQICSYEIVTPDVPFTIDKDGYIKNTEKLNYGKEHQYKLTVTAY
DCGKKRAAEDVLVKIGIKPTCTPGWQGWNNRIEYEPGTGALAVFPNIHLETCDEPVASVQ
ATVELETSHIGKGCDRDTYSEKSLHRLCGAASGTAELLPSPSSALNWTIGLPTDNGHDSN
QVFEFNGTQAVRIPDGVVSVNPKEPFTISVWMRHGPFGRKKETILCSSDKTDMNRHRYSL
YVHGCRLVFLLRQDPSEEKKYRPAEFHWKLNQVCDEQWHHYVLNVEFPSVTLYVDGVSHE
PFSVTEDYPLHPSKIETQLVVGACWQEYSGLESDNETEPVTMASAGGDLHMTQFFRGNLA
GLTLRSGKLADKKVIDCLYTCKEGLDLQVPEDGGRGVQIQANPSQSVLTLEGEDIGELDK
AIQHVSYLNSRQFPTPGIRRLKITSTVKCFNEAACISVPPVEGYVMVLQPEEPKISLSGV
HHFARAASEFESSEGVFLFPELRIISTITREVEPEGDGAEDPTVQESLVSEETVHDLDAC
EVTVEGEELNQEQESLEVDMARLQQKGIEVSSSELGVTFTGVDTMASYEEVLHLLRYRNW
HSRSLLDRKFKLICSELNGRYISNEFKVEVNVIHTANPLEHVNHMAAQPQFVHPEHRSFV
DLSGHNLASPHPFAVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENE
MDWDDSALTITVNPMETYEDQHSSEEEEEEEEEEESEEGEEEDDITSAESESSEEEEEQG
DQQSGSRQQQLEWDDSTLTY
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgccctgcacccgcgctggccccggccgcctggctgctgctggccgggctg
ctgagcggcggcggggtctgggccacgcgagttaacaagcacaagccgtggctggagccc
acctatcacggcatcgttacggagaacgacgacacggtgctcctcgatccccccctgatc
gccctggataaagatgcacctctgcattttgcagagagttttgaggtgacagtcaccaaa
gaaggtgagatttgtggatttaaaattcacgggcagaatgtccccttcgacgcagtggtg
gtggacaagtccactggcgagggcgtgattcgctccaaagagaaactggactgtgagctg
cagaaagactactcattcaccatccaggcctatgactgtgggaagggacccgacggcacc
aacgtgaaaaagtctcataaagcaactgttcatattcaggtgaatgatgtgaacgagtat
gctcccgtgttcaaggagaagtcctacaaagccacggtcaccgaggggaagccgtccgac
agcatcctgcgggtggaggccgtggacgcagactgctccccacagttcagccagatctgc
agctatgagattgtcaccccagacgtgccattcactatcgacaaggacggttatataaaa
aacacagagaagctaaactacgggaaggagcaccagtataagctgaccgtcaccgcctat
gactgcgggaagaagagagctgcggaagatgttttggtgaagattggcattaagcccacc
tgcacccccgggtggcaaggatggaacaacaggatcgagtacgagcctgggacgggtgcc
ttagctgtcttcccaaacatccacctggagacctgcgacgagccagtcgcctccgtgcag
gccacggtggagctggagaccagccacataggcaaaggctgtgaccgggacacctactcc
gagaagtcccttcaccggctctgtggtgctgcctctggcactgccgagctgcttccttcc
ccaagcagcgccttgaactggaccatcggcctccccactgacaacggccatgacagcaac
caggtctttgagttcaatggcactcaagcagtgaggatcccagatggcgttgtttctgtc
aatccaaaagagccttttacgatttccgtgtggatgaggcatgggccttttggcaggaag
aaagagacgattctgtgcagttcagacaaaacagatatgaatcggcaccgttactcacta
tatgtccacgggtgccggctagtgttcctgctccgtcaggatccgtccgaggagaaaaaa
tacagacctgcggaattccactggaagctgaatcaggtctgtgacgagcagtggcaccac
tacgtcctcaacgtggaattccccagtgtgactctctatgtggacggtgtctctcatgag
cccttctctgtgactgaggattatcctctccatccatccaagatagaaactcagctcgtg
gttggggcgtgctggcaagagtattcaggacttgaaagtgacaatgaaactgagcctgtg
actatggcctctgcaggtggcgacctgcacatgacccagtttttccgaggtaacctggct
ggcctaacactccgttctgggaaacttgcggataagaaggtgattgactgtctgtatacc
tgcaaagaggggctggacctgcaagtccctgaagacggtggcagaggcgtgcagatccag
gccaaccccagtcagtcagtgttgaccttggagggagaagatattggggagttggacaaa
gccatacagcatgtttcctacctgaactctcggcagtttcccacgcctggaatccgaaga
ctcaaaatcaccagcaccgtcaagtgttttaacgaggccgcctgcatctcggtgccccca
gtagagggctacgtgatggttttacagcccgaagagcccaagatcagcctgagtggcgtc
caccactttgcccgagcagcttctgaatttgaaagctcagaaggggttttccttttcccc
gagcttcgaatcatcagcaccatcacccgagaagtggagcctgaaggggatggggctgag
gaccccacagttcaagagtcactggtgtccgaggagaccgtgcatgacctggatgcctgt
gaggtcacggtggagggagaggagctgaaccaagagcaggagagcctggaggtagacatg
gcccgcctgcagcagaagggcatcgaagtgagcagctccgagctgggcgtgaccttcaca
ggtgtggacaccatggccagctacgaggaggttctgcacctcctgcgctatcggaactgg
cactccaggtctttgcttgaccggaagttcaagctcatctgctcggagctgaatggccgc
tacatcagcaacgagttcaaggtggaggtgaatgtcatccacacagccaaccccctggag
cacgtgaaccacatggctgcccagccgcagttcgtgcaccccgagcatcgctccttcgtt
gatctgtctggtcacaacctggccagtccccacccattcgcagttgtccccagcacggcg
accgttgtgattgtggtgtgtgtcagcttcctggttttcatgatcatcctgggagtgttc
cggatccgtgctgcacaccagcgcaccatgcgggaccaggacaccgggaaggagaatgag
atggactgggacgactctgccttgacaatcaccgtcaaccccatggagacgtacgaggac
cagcacagcagtgaggaggaagaggaggaagaggaggaggaggagagcgaggaaggtgag
gaggaggatgacatcaccagtgcagagtcggagagcagcgaggaggaggaggagcagggt
gaccagcagagcgggagccggcagcagcagcttgagtgggacgactccaccctcacttac
tga
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