Otolemur garnettii (small-eared galago): 100953488
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Entry
100953488 CDS
T07855
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X2
KO
K12879
THO complex subunit 2
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03013
Nucleocytoplasmic transport
oga03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100953488 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
100953488 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oga03019
]
100953488 (THOC2)
03041 Spliceosome [BR:
oga03041
]
100953488 (THOC2)
Messenger RNA biogenesis [BR:
oga03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100953488 (THOC2)
Spliceosome [BR:
oga03041
]
Complex C
Other components
EJC/TREX
100953488 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100953488 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
100953488
NCBI-ProteinID:
XP_012665115
Ensembl:
ENSOGAG00000000302
UniProt:
H0WG54
LinkDB
All DBs
Position
Unknown
AA seq
1593 aa
AA seq
DB search
MASATVVVPAEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASNVLNDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLEAYMSMCE
PQTLCHILGFKFKFYQEPSGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIVEAKQIVRKLTMVVLSSDKMDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ
AETFEDLRRDVFSMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPHTSYE
REVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNAVASV
QNGPGGGPSSSSIGSASKSDESSTEETDKSRERSQCGVKAVNKASSTTPKGNSSNGNSGS
NSSKAVKENEKEKGKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERPNKDEKARETKER
TPKSDKEKEKFKKEEKAKDEKFKTTIPNAESKSIQEREREKEPSRERDIGKEMKSKENVK
GGEKTPISGSLKSPVPRSDMAEPEREQKRRKIDTHPSPSHSSTVKDSLIELKESSAKLYI
NHTPPPLSKSKEREMDKKDLDKSRERSREREKKDEKDRKERKRDHSNNDREVPPDLNKRR
KEENGTMGISKHKSESPCESPYPNEKDKEKNKSKSSGKEKSGDSFKSEKMDKISSGGKKE
SRHDKEKIEKKEKRDSSGGKEEKKHHKSSDKHR
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgcaactgtggtggttcccgcagagtggataaagaattgggagaaatcaggg
agaggcgaatttttgcatttatgccggatcctaagtgaaaataaaagccatgatagttcg
acttacagagatttccagcaagctctctatgagttgtcataccatgttattaaaggaaat
ctaaaacacgaacaggcatctaatgttcttaatgacattagtgaatttcgagaggatatg
ccctccattcttgcagacgtattctgcatattagatattgagacaaattgtttagaagaa
aaaagcaagagagactattttacacagttggtattagcctgtttgtatttagtttcagac
acagttctaaaggaacgcctggatccagaaacactggaatcattagggcttatcaaacaa
tcacagcagttcaatcaaaagtcggttaaaatcaagacaaaactcttttataagcagcaa
aaattcaatttgttaagagaagagaatgaaggctatgccaagctgattgctgaattgggt
caagatttatctggcaatatcactagtgatttaatcttagaaaatatcaaatctttaata
ggatgctttaatctggatcctaatagagttttggatgtcattttagaagtgtttgaatgc
aggccagaacacgatgacttctttatatctttattagaagcttatatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttaccaggaaccaagtggc
gaaactccatcatctttatacagagttgcagcagtacttctacaatttaatcttattgat
ttagatgatctttatgtacatcttcttccagcggataattgcattatggatgaacacaaa
cgagaaattgtagaagcaaagcaaattgttagaaaacttacaatggttgtgttgtcttct
gataaaatggatgagcgagaaaaagaaaaggaaaaagaagaggagaaagtagagaagcca
ccagacaaccaaaaacttggtttgttggaagccttgttaaagattggtgattggcagcat
gcgcagaacattatggatcagatgcctccatactatgcagcttcacataagctaatagcc
cttgctatttgcaagctcattcacataactattgagcctctctatcgaagagttggcgtt
cctaaaggtgctaaaggctcgcctgttaatgctttgcaaaataagagagcacccaaacaa
gcagagacctttgaagatttgaggagagatgtgttcagtatgttctgttaccttggtcct
cacctttctcacgatcccattttatttgcaaaagtggtgcgcataggcaagtcatttatg
aaagagtttcagtctgatggaagcaaacaagaagataaagagaaaacggaagttattctt
agctgtttacttagcattactgaccaggtactacttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactatggggaatgtttaaaacatttccgtatcagcataga
taccgtctgtatggccagtggaagaatgaaacttacaacagtcacccacttttagtaaaa
gttaaagctcaaacaatagacagagctaaatatatcatgaagcgcttaacaaaggaaaat
gtgaaaccttctggaagacaaattgggaagttgagccacagcaatccaaccattttgttt
gattatatcttgtcacaaatacagaagtatgataacttaataacacctgtagtagattca
ttgaaatacctcacttcattgaattacgatgtcttggcatattgcattattgaagcttta
gctaatccagaaaaggagagaatgaaacatgatgacacaaccatctcaagctggcttcaa
agtctggctagtttctgtggtgcagtttttcgtaaatatccaattgatcttgctggtctt
cttcaatatgtggccaatcagctaaaggcaggcaaaagttttgacctgcttatattgaaa
gaagtggtacaaaaaatggcaggaatagaaattacagaggaaatgacaatggagcaatta
gaggccatgactggtggagagcagctaaaagctgagggtggttattttggccagattagg
aacactaaaaaatcctctcagaggctaaaggatgcgctattggaccatgatcttgctctt
cctctgtgtttgcttatggctcagcaaaggaatggggtaatctttcaggaaggtggagag
aagcatttgaaacttgtgggaaagctctatgaccagtgtcatgataccctggtacagttt
ggtgggtttttagcatctaatctaagcacagaagattatataaagcgagtgccttcaatt
gatgtgctttgtaatgaatttcatacaccccacgatgcagcgtttttcctgtctaggcca
atgtatgcacaccatatttcgtcaaagtatgatgaacttaaaaaatcagaaaagggaagt
aaacagcaacataaagttcacaagtacataacatcatgtgagatggtgatggctcctgtc
catgaagcagtggtctccttacatgtttccaaagtctgggatgacatcagccctcaattc
tatgccacattctggtcattgacaatgtatgaccttgcagttccacataccagctatgaa
cgagaagtcaataaacttaaagtccagatgaaagcaattgatgataatcaggaaatgcct
ccaaataaaaaaaaaaaagagaaggagcgctgtactgcccttcaggacaaactgcttgaa
gaagaaaagaaacagatggaacatgtgcagagagtcctccagagattaaaactggaaaag
gacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt
gaattggtacatcaacagaaaactccaaatttttccacacttctttgctatgatcgagtt
ttctctgacataatttacacagttgcaagctgtactgaaaatgaagctagtcgatatggg
agatttctttgctgcatgttagagactgtgaccaggtggcatagtgatagagccacgtat
gaaaaggaatgtggaaactatccaggattccttaccatattacgggcaactggatttgat
ggtggaaataaggctgatcaattagactatgaaaattttcgacatgttgtacataaatgg
cattacaaacttactaaggcatcggtgcattgccttgaaacaggcgaatatactcacatc
aggaatatcttgattgtgctaacaaaaatacttccttggtacccaaaagttttgaatctg
ggccaggctttggaaagaagagtgcataaaatctgccaagaagaaaaagagaagaggcca
gatctatatgcattggctatgggctactctgggcagttgaaaagtagaaagtcatacatg
atacctgaaaatgagtttcatcacaaagacccccctccgaggaatgcagttgccagtgta
caaaatgggcctggtggtgggccttcatcatcatcaataggaagtgcatctaagtcggac
gaaagcagtactgaggagactgataaatcaagggaaagatctcagtgtggtgtgaaagct
gttaataaagcttctagtaccacaccaaaagggaattcaagcaatggaaatagtggctct
aacagcagcaaagctgttaaagaaaatgagaaagaaaaagggaaagagaaagaaaaagag
aaaaaagaaaagactccagctactactccagaggccagggtacttggtaaagatggtaaa
gaaaaaccaaaggaagagcggccaaataaagatgaaaaagcaagagagaccaaggaaaga
acgcctaagtctgacaaagagaaagaaaaattcaagaaggaagaaaaagctaaagatgag
aaattcaagaccaccattcccaatgcagaatcaaaatcaattcaagaaagggaaagagaa
aaggagccatccagagaaagagatataggaaaggaaatgaaatcaaaggaaaatgttaaa
ggaggagaaaaaacaccaatttctgggtccttgaagtcacctgttccccgatcagatatg
gcagagcctgaaagggaacagaaacgccgcaaaattgatacccacccttctccatcacat
tcctccacagtaaaggacagtctcatcgaactcaaggagtcttcagcaaagctctacatt
aaccatactcctccaccactgtccaagagtaaggagagagaaatggacaagaaagacttg
gacaagtcaagggagagatccagagaaagagagaaaaaagatgaaaaggacaggaaagag
cggaaaagggatcactcaaacaatgaccgtgaagtaccaccggacttgaacaagaggcgt
aaagaggaaaatggaacaatggggatttcaaaacacaaaagtgaaagtccatgtgaatct
ccttatccaaatgagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaaaaa
agtggtgattcatttaaatctgagaaaatggataagatctcctctggtggcaaaaaggag
tccaggcatgataaagaaaagatagaaaagaaagagaaacgggacagttcaggaggaaag
gaagagaagaagcatcataagtcctcggacaagcacagataa
DBGET
integrated database retrieval system