Otolemur garnettii (small-eared galago): 100953606
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Entry
100953606 CDS
T07855
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
oga
Otolemur garnettii (small-eared galago)
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oga04131
]
100953606 (VPS50)
Membrane trafficking [BR:
oga04131
]
Protein recycling
Others
EARP complex
100953606 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
100953606
NCBI-ProteinID:
XP_003782719
Ensembl:
ENSOGAG00000000281
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDLGALESLRVPGKEEFRELREQPCDPQAEQELINSIEQV
YFSADSFDIVQYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNVAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAENT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTASASEG
SNMGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIISR
LMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSIL
QLHEFKFMEQSRSPSVSPSKQPVSTSSKTMTLFEQYCSGGNPFEIQANHKDEETEDVLAS
NGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLNK
VNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSLE
STGLGLSSSRLRTTLNRIQESLIDLDVSADPTATLTAAEERKEKVPSPHLSHLVVLTSGD
TLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPIY
WIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIPL
PVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKE
FVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDIDR
PKR
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaataaaatctcttatgacccgccagggtctgaaaagccctccagagagcctc
agtgacctcggtgccctcgagagtctccgggtccctggaaaggaagaattcagggaactt
cgagaacagccatgtgaccctcaagctgaacaagagcttattaatagtattgaacaagta
tatttttctgcggactcatttgatattgttcaatatgagctggagaaacttccacctgtt
ctcaatttgcaagaattagaggagtacagagacaagctgaaacaacagcaagctgcagtc
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtaaaggaacttgaa
agagttacctcattacagacaggtcttcaattagctgctgttatctgcacaaatgggaga
agacacttgaatgttgcgaaagaaggttttactcaagctagtttaggccttcttgcaaat
cagaggaaacgtcagttgctgattggacttctgaaatccctgagaactataaaaacattg
caaaggacagatgtacgcttaagtgaaatgctagaggaggaagactacccaggagctatt
cagttgtgcctggaatgtcagaaagctgccagcacttttaaacattacagttgtataagt
gaactgaattcaaagctgcaagataccttagaacaaattgaggaacagctggatgttgct
ctttccaaaatctgcaagaattttgatattaaccattatacaaaagttcaacaagcatat
cgactgcttggaaagacacagacagcaatggatcagcttcatatgcacttcacccaagcc
attcacaataccgtgtttcaagttgttcttggttatgtggaactatgtgctgagaacaca
gacactaaattccaaaagctgcaatataaagatctctgtacacacgtcacaccagacagc
tatatcccatgccttgcagacctgtgcaaagctctgtgggaggttatgctcagctattac
agaactatggagtggcatgaaaagcatgacaatgaggatactgcttcagcttctgaagga
agtaatatgggtactgaagaaactaattttgatcgtggttatataaaaaagaagttagag
catgggcttacacgaatatggcaggatgttcagctaaaagtaaaaacctatttgctggga
actgatttgtctatattcaaatatgatgacttcatctttgttttggatataatcagcagg
ttgatgcaagttggagaagaattttgcggtagcaagtctgaagttttgcaagagtccatt
agaaaacaaagtgtcaattattttaagaactaccatagaacacgacttgatgaactgaga
atgttcttagagaatgagacttgggaactttgtcctgttaagtcaaatttcagcatcttg
caacttcatgaatttaaattcatggaacaatctcgttccccatcggtttcacctagtaag
caaccagtctcaacatcttcaaaaacaatgactttgtttgagcagtactgtagtggtggg
aatccatttgaaattcaggccaaccacaaagatgaggagacagaagatgtgttggcttct
aacgggtatgagtctgatgaacaagaaaagagtgcctatcaggagtatgacagtgacagt
gatgttcctgaggaactcaagcgagattatgtagatgagcagacaggcgacgcacctgtg
aagagtgtttctcgagaaaccctaaaaagcaggaagaaatctgattacagtctaaataaa
gtgaatgcacctattttaacaaatacaacattgaatgtaataagacttgttgggaaatat
atgcagatgatgaacattcttaagccaattgcctttgatgttatccattttatgtctcag
ctatttgattattatttatatgccatatataccttttttggtcggaatgattcattggaa
tcgacaggacttggccttagcagtagtcgactaagaacaactctaaatagaatacaagaa
agccttattgatctggacgtttcagctgatcctactgccacgctcacagcagcagaagaa
agaaaggagaaggtaccaagcccacacctcagtcacctagtggttttgacatctggcgat
acgttgtatgggttagcggaaagagtggtagccacggagtccttggtattcttggctgaa
caatttgagtttcttcagccacatctggatgctgtgatgcctgcagttaaaaagcccttt
cttcagcagttttattctcagacggtttcaactgccagtgaactacgcaagccaatttac
tggattgtagctggtaaagccattgattatgagcagatgctgctcctgatggctaatgtg
aagtgggatgtaaaggaaatcatgtcccagcacaacatatatgtagatgctttgttaaag
gaatttgagcaatttaacaggaggctaaatgaagtttctaagagagtgcggatacccttg
cctgtctccaacatactttgggaacattgtatacgactggctaatagaactattgtggaa
ggatatgccaatgtcaagaagtgcagtaatgagggtcgtgccttgatgcaattggatttt
caacagtttttaatgaaacttgaaaaactaacagatattagacccattcctgataaagaa
tttgtggaaacctatattaaagcctactacctgacagagaatgacatggaacgctggatc
aaagagcacagggaatattcaacaaaacaactgaccaatttggtgaatgtctgcttgggc
tcccatatcaataagaaagcaagacagaaacttctagcagctatagatgatatagacaga
cctaaaagataa
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