Otolemur garnettii (small-eared galago): 100954105
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Entry
100954105 CDS
T07855
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100954105 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oga03000
]
100954105 (SOX17)
Transcription factors [BR:
oga03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100954105 (SOX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
100954105
NCBI-ProteinID:
XP_003793740
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MSSPDAGYASDDQSQTQSALPAVMAGLGPCPWAESLSPLGDMKVKGEAAASSGTPAGAAG
RAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGGRVAMDGLG
LPFPDQGFPAGPPLLPPHMGGHYRDCQGLGAPQLDGYPLPTPDTSPLDGVEPDPAFFAPL
SGDCPAAGSYSYAQVSDYAGPPEPPSGPMHPRLGPEPAGSAMSGLLAPPSALHMYYGAMA
SPGAGGGRGFQMQHQHQHQHPHQQHPPGPGQPSPPPEALPCRDSADPSQPTELLGEMDRT
EFEQYLHFVCKPEMGLPYQGHDSSVNLPDGHGAISSVVSDASSAVYYCSYPDV
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccggatgcgggatacgccagtgacgaccagagtcagacccagagcgcgctg
cccgccgtgatggctgggctgggcccctgcccctgggccgagtcgctgagtccccttggg
gacatgaaggtgaagggcgaggcggcagcgagcagcggaacgccggccggggcggcgggc
cgagccaagggcgagtctcgcatccggcggccgatgaacgcgttcatggtgtgggctaag
gacgaacgcaagcggctggcgcagcagaacccagatctgcataacgccgagctcagcaag
atgttgggcaagtcgtggaaggcgctgacgctggccgagaagcggcccttcgtggaggag
gccgagcggctccgagtgcagcacatgcaggaccaccccaattacaagtaccggccgcgg
cggcgcaagcaggtgaaacggctgaagcgggtggagggcggcttcctgcacggcctcgcc
gagccacaggcggctgccctgggccccgagggcggccgggtggccatggacggcctgggc
ctgcccttccccgaccagggcttccccgcgggcccgccgctgctgcctccgcacatgggc
ggccactaccgcgactgccagggcctgggcgcgccccagctcgacgggtacccgctgccc
acacccgacacgtccccgctggacggcgtggagcccgacccggccttctttgctccgttg
tccggggattgcccggcggccggcagctacagctacgcgcaggtctcggactatgcgggg
ccaccggagcctccttccggccccatgcatccacggctcggcccggagcctgcgggctcc
gcaatgtcgggcctcctggcgccccccagcgccctgcacatgtactacggtgcgatggct
tcgccgggggcgggcggcgggcgcggcttccagatgcagcaccagcaccagcaccagcat
ccgcaccagcagcacccgccggggcccgggcagccgtcaccccctcctgaggcactgccc
tgccgagacagcgcggaccccagccagcccacggagctcctgggggagatggatcgcacg
gaatttgaacagtatctgcactttgtgtgcaaacctgagatgggtctcccctaccaggga
cacgactccagtgtgaatctcccggacggccacggggccatctcctcggtggtgtccgat
gccagctctgcggtatattactgcagctatcctgacgtgtga
DBGET
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