Otolemur garnettii (small-eared galago): 100954801
Help
Entry
100954801 CDS
T07855
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X2
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03082
ATP-dependent chromatin remodeling
oga03250
Viral life cycle - HIV-1
oga04714
Thermogenesis
oga05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100954801 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100954801 (SMARCB1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100954801 (SMARCB1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100954801 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oga01009
]
100954801 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oga03021
]
100954801 (SMARCB1)
03036 Chromosome and associated proteins [BR:
oga03036
]
100954801 (SMARCB1)
Protein phosphatases and associated proteins [BR:
oga01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100954801 (SMARCB1)
Transcription machinery [BR:
oga03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100954801 (SMARCB1)
SWI/SNF complex
100954801 (SMARCB1)
Chromosome and associated proteins [BR:
oga03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100954801 (SMARCB1)
PBAF complex
100954801 (SMARCB1)
SWI/SNF complex
100954801 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
100954801
NCBI-ProteinID:
XP_003803335
Ensembl:
ENSOGAG00000009930
UniProt:
H0X1K5
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKRNS
QWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLVPI
RLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQQIESYP
TDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVT
TIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQD
RNTRRMRRLANTAPAW
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgctgagcaagacctttgggcaaaagcccgtcaagttccagctggag
gacgacggcgaattctacatgatcggctccgaggtgggaaactacctccgtatgttccga
ggttctctgtacaagagatacccctcactctggaggcgactagccactgtggaagagagg
aagaaaatagttgcatcgtcacatgatcatggatatacaactctagctaccagtgtgact
ctgctaaaagcctcagaggtggaggagattctggatggcaatgatgagaagtacaaggct
gtatccatcagcacggagccccccacctacctcagagaacagaaggccaagaggaatagc
cagtgggtgcccaccctgcccaacagctcccaccacctggacgctgtgccatgttccacg
accatcaacaggaaccgcatgggccgggacaagaagaggaccttccccctgtgctttgat
gaccatgacccggctgtgatccatgagaatgcgtcccagcccgaggtgctagtccccatc
cggctggacatggaaattgatgggcagaagctgcgggacgccttcacctggaacatgaat
gagaagttgatgacccctgagatgttttcggaaatcctctgtgacgacctggatttgaac
ccgctgacgtttgtgccagccatcgcctcagctatcagacagcagatcgagtcctacccc
acagacagtatcctagaggaccagtcagaccagcgtgtcattatcaagctaaacatccat
gtggggaacatttccctggtggaccagtttgagtgggatatgtcagagaaggagaactca
ccagaaaagtttgccctgaagctgtgctcagagctggggctgggcggggagtttgttacc
accattgcatacagcatccggggacagctgagctggcatcagaagacctatgccttcagt
gagaaccccttgcccacagtggagattgccatccggaacactggtgatgcagaccagtgg
tgcccactgctggagaccctgacagatgctgagatggagaagaagatccgtgaccaggac
aggaacacaaggcgcatgaggcgtcttgccaacaccgccccggcctggtaa
DBGET
integrated database retrieval system
