Otolemur garnettii (small-eared galago): 100954858
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Entry
100954858 CDS
T07855
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03440
Homologous recombination
oga03450
Non-homologous end-joining
oga04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100954858 (RAD50)
03450 Non-homologous end-joining
100954858 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
100954858 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oga03032
]
100954858 (RAD50)
03400 DNA repair and recombination proteins [BR:
oga03400
]
100954858 (RAD50)
DNA replication proteins [BR:
oga03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
100954858 (RAD50)
DNA repair and recombination proteins [BR:
oga03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
100954858 (RAD50)
BRCA1-C complex
100954858 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
100954858 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
DUF2703
AAA_29
Motif
Other DBs
NCBI-GeneID:
100954858
NCBI-ProteinID:
XP_003782255
Ensembl:
ENSOGAG00000015497
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELVAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGERVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLTSSKEI
VKSYENELDPLKNRLKEIEHNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERKLIDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHIRARDSLIQSLAIQLELDGFERGPFSERQIKNFHKLVRERQEKEAETANQLMNDFAE
KEALKQKQIDEIRDKKTGLGRIIELKLEIQSKKQHELKNAKYELQQLEGSSDRILELDQE
LTKAERELSKAEKNSNVEALKMEVISLQNEKVDLDRTLRKLDQEMEQINHHTTTRTQMEM
LTKDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINNELKKKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLADENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTVMP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQLLKSTTNELKSEKLQISSNLQRRQQLEEQTVELSTEVQS
LHREIKDAKEQVSPLETTLEKFQQEKEELINKKNTSNKIAQDKLNDIKEKVKNIHGYVKD
IENYIEDGKEDYKKQKETELNKVIAQLSECEKHKEKINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENIENIKRNHSLALGRQKG
YEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRNTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattctgggcgtgcggagttttggaatagaggacaaa
gataagcaaattatcactttcttcagccccctcacaattttggttggacccaatggggcg
gggaagacgaccatcattgaatgtctaaaatatatttgtactggagatttccctcctgga
accaaaggaaatacgtttgttcatgatcccaaggttgctcaggagacagatgtgagagcc
cagattcgtctgcagtttcgtgatgtcaatggagaacttgtagctgtgcagagatctatg
gtgtgcactcagaaaagcaaaaagacagaatttaaaacactggaaggagtcattactaga
acaaagcatggcgaaagggtcagtctaagctctaagtgtgcagaaattgaccgtgaaatg
ataagttctcttggagtttccaaatctgtgctaaataatgtcattttctgtcatcaagaa
gattccaattggcctttaagtgaaggaaaggctttgaagcaaaagtttgatgagattttt
tcagcaacaagatacattaaggccctggaaacacttcggcaggtacgtcagacacaaggt
cagaaagtaaaagaatgtcaaacagaactaaaatatctgaagcagaataaggaaaaagct
tgtgagattcgtgatcagattaccagtaaggaagctcagttaacatcttcaaaggaaatt
gtgaaatcctatgagaatgaactcgatccattaaagaatcgtttaaaagaaattgaacac
aatctctctaagataatgagacttgacaatgaaattaaagccttggatagccgaaagaag
caaatggagaaagataatagtgaactggaacagaagatggaaaaggtttttcaggggact
gatgagcaactaaatgacttatatcacaatcaccagagaacagtaagagagaaagaaagg
aaattgatagattgtcagcgtgaactggaaaaattaaataaagaatctaggcttctcaat
caagaaaaatcagaactactagttgagcagggtcgtctacagctacaggcagatcgccat
caagaacatatccgagctagagattcattaattcagtctttggcaatacagctagaattg
gatggttttgagcgtggaccattcagtgaaagacaaattaaaaattttcacaaacttgta
agagaaagacaagaaaaggaagcagaaactgccaaccaactcatgaatgattttgcagaa
aaagaggctctgaaacaaaaacagatagatgagataagggataagaaaactggactggga
agaataattgagctaaaattggaaatccaaagtaagaaacagcatgagctgaaaaatgcg
aagtatgaattacagcagttggaaggatcttcagacaggattcttgaattggaccaggag
ctcacaaaagctgaacgtgagctaagcaaagctgagaaaaacagcaatgtagaagcccta
aaaatggaagttataagccttcaaaatgagaaagtggacttagacaggaccctgcgtaaa
ttagaccaggagatggagcagataaaccatcatacaacaacacgtacccagatggagatg
ctgaccaaagacaaagctgacaaagatgaacaaatcagaaaaataaaatctaggcacagt
gatgaattaacttcactgttggggtactttcccaacaaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacagacttgccaagttgaacaaagaa
ctagcttcagctgagcaaaataaaaatcatataaataatgagctaaaaaaaaaagaagag
caattgtccagttatgaagataaactgtttgatgtttgtggtagccaggactttgaaagt
gatttagacagacttaaggaagaaattgaaaaatcctccaaacagcgagccatgctggct
ggagccacagcagtttactcccaattcattactcagctagcagatgaaaaccagtcatgt
tgccctgtctgtcagagagtttttcagacagaggctgaattacaagaagttatcagtgat
ttacagtctaaactgcggcttgctccagataaactcaagtcaacagaatcagagctaaag
aaaaaggaaaaacgacgtgatgaaatgctgggactcgtgcccatgaggcaaagtataatt
gatttgaaagaaaaggaaataccagaattaagaaacaaactgcaaaatgtcaatagagac
atacagcgcctaaaaaatgacatagaagaacaggaaacgctcctgggtactgtaatgcct
gaagaagaaagtgctaaagtatgtctgacagatgttacaattatggagaggttccagatg
gaacttaaagatgttgaaagaaaaattgcacaacaagcagctaagctacaaggaatagac
ttagaccgaactgttcaacaagtaaaccaggaaaaacaagaaaaacaacacaaattagat
acagtttccagtaagattgaattaaatcgtaagcttatacaggaccagcaagaacagatt
caactcctaaaaagtaccacaaatgaactaaaatcagaaaaacttcagatatctagtaat
ttgcaacgtcgtcagcagctggaggagcagactgtggaattatccactgaagttcagtct
ttacacagagaaataaaggatgctaaagagcaggtgagccctttggaaacaacattggaa
aagttccagcaggaaaaggaagaattaatcaacaaaaaaaatacaagcaacaagatagca
caggataaactgaatgatatcaaagagaaggttaaaaatattcatggttatgtgaaagac
attgagaattatattgaagatgggaaagaggactataaaaagcaaaaagaaactgaactt
aataaagtaatagctcaactaagtgaatgtgagaaacacaaagaaaagataaataaagaa
atgggaatcatgagacaagatattgatacacagaagatacaagaaaggtggctacaggat
aaccttactttaagaaaaagaaacgaggaactgaaagaagtggaagaagaaagaaaacaa
catttgaaggaaatgggacaaatgcaggttttacaaatgaaaaatgagcatcaaaagttg
gaagagaacatagaaaatataaaaagaaatcatagtttggcattaggacgacagaagggt
tatgaggaagaaattattcattttaagagagaacttcgagaacctcaatttcgtgatgcc
gaggaaaagtatagagaaatgatgattgttatgagaacaacagagcttgtgaacaaggat
ctggacatttattataagacccttgaccaggcaataatgaaatttcacagtatgaaaatg
gaggaaatcaataaaattattcgtgacctttggcgaaatacataccgtggacaagatatt
gaatacatagaaattaggtctgatgctgatgaaaacgtatcagcatctgataaaaggcgg
aattataactaccgagtggtgatgctaaagggagacacagccttggatatgcgaggacga
tgcagtgctggacaaaaggtgttagcctcactcatcattcgtctggccctggctgaaaca
ttctgcctcaactgtggtatccttgccttggatgaaccaacaacaaatcttgaccgagaa
aacattgaatctcttgcacacgctttggttgagataataaaaagtcgctcacagcagcgt
aacttccagcttctggtaatcactcatgatgaagattttgtggagcttttgggacgttct
gaatatgtggagaaattctacaggattaagaagaacattgatcagtgctcagagattgtg
aaatgcagtgttagctctctgggatcttatgttcattaa
DBGET
integrated database retrieval system