KEGG   Otolemur garnettii (small-eared galago): 100954858
Entry
100954858         CDS       T07855                                 
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
oga  Otolemur garnettii (small-eared galago)
Pathway
oga03440  Homologous recombination
oga03450  Non-homologous end-joining
oga04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:oga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    100954858 (RAD50)
   03450 Non-homologous end-joining
    100954858 (RAD50)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    100954858 (RAD50)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oga03032]
    100954858 (RAD50)
   03400 DNA repair and recombination proteins [BR:oga03400]
    100954858 (RAD50)
DNA replication proteins [BR:oga03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    100954858 (RAD50)
DNA repair and recombination proteins [BR:oga03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     100954858 (RAD50)
    BRCA1-C complex
     100954858 (RAD50)
   NHEJ (non-homologous end-joining)
    MRX complex
     100954858 (RAD50)
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook AAA_21 SbcC_Walker_B SMC_N AAA_15 DUF2703 AAA_29
Other DBs
NCBI-GeneID: 100954858
NCBI-ProteinID: XP_003782255
Ensembl: ENSOGAG00000015497
LinkDB
Position
Unknown
AA seq 1312 aa
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELVAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGERVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLTSSKEI
VKSYENELDPLKNRLKEIEHNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERKLIDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHIRARDSLIQSLAIQLELDGFERGPFSERQIKNFHKLVRERQEKEAETANQLMNDFAE
KEALKQKQIDEIRDKKTGLGRIIELKLEIQSKKQHELKNAKYELQQLEGSSDRILELDQE
LTKAERELSKAEKNSNVEALKMEVISLQNEKVDLDRTLRKLDQEMEQINHHTTTRTQMEM
LTKDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINNELKKKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLADENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTVMP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQLLKSTTNELKSEKLQISSNLQRRQQLEEQTVELSTEVQS
LHREIKDAKEQVSPLETTLEKFQQEKEELINKKNTSNKIAQDKLNDIKEKVKNIHGYVKD
IENYIEDGKEDYKKQKETELNKVIAQLSECEKHKEKINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENIENIKRNHSLALGRQKG
YEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRNTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVKCSVSSLGSYVH
NT seq 3939 nt   +upstreamnt  +downstreamnt
atgtcccggatcgaaaagatgagcattctgggcgtgcggagttttggaatagaggacaaa
gataagcaaattatcactttcttcagccccctcacaattttggttggacccaatggggcg
gggaagacgaccatcattgaatgtctaaaatatatttgtactggagatttccctcctgga
accaaaggaaatacgtttgttcatgatcccaaggttgctcaggagacagatgtgagagcc
cagattcgtctgcagtttcgtgatgtcaatggagaacttgtagctgtgcagagatctatg
gtgtgcactcagaaaagcaaaaagacagaatttaaaacactggaaggagtcattactaga
acaaagcatggcgaaagggtcagtctaagctctaagtgtgcagaaattgaccgtgaaatg
ataagttctcttggagtttccaaatctgtgctaaataatgtcattttctgtcatcaagaa
gattccaattggcctttaagtgaaggaaaggctttgaagcaaaagtttgatgagattttt
tcagcaacaagatacattaaggccctggaaacacttcggcaggtacgtcagacacaaggt
cagaaagtaaaagaatgtcaaacagaactaaaatatctgaagcagaataaggaaaaagct
tgtgagattcgtgatcagattaccagtaaggaagctcagttaacatcttcaaaggaaatt
gtgaaatcctatgagaatgaactcgatccattaaagaatcgtttaaaagaaattgaacac
aatctctctaagataatgagacttgacaatgaaattaaagccttggatagccgaaagaag
caaatggagaaagataatagtgaactggaacagaagatggaaaaggtttttcaggggact
gatgagcaactaaatgacttatatcacaatcaccagagaacagtaagagagaaagaaagg
aaattgatagattgtcagcgtgaactggaaaaattaaataaagaatctaggcttctcaat
caagaaaaatcagaactactagttgagcagggtcgtctacagctacaggcagatcgccat
caagaacatatccgagctagagattcattaattcagtctttggcaatacagctagaattg
gatggttttgagcgtggaccattcagtgaaagacaaattaaaaattttcacaaacttgta
agagaaagacaagaaaaggaagcagaaactgccaaccaactcatgaatgattttgcagaa
aaagaggctctgaaacaaaaacagatagatgagataagggataagaaaactggactggga
agaataattgagctaaaattggaaatccaaagtaagaaacagcatgagctgaaaaatgcg
aagtatgaattacagcagttggaaggatcttcagacaggattcttgaattggaccaggag
ctcacaaaagctgaacgtgagctaagcaaagctgagaaaaacagcaatgtagaagcccta
aaaatggaagttataagccttcaaaatgagaaagtggacttagacaggaccctgcgtaaa
ttagaccaggagatggagcagataaaccatcatacaacaacacgtacccagatggagatg
ctgaccaaagacaaagctgacaaagatgaacaaatcagaaaaataaaatctaggcacagt
gatgaattaacttcactgttggggtactttcccaacaaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacagacttgccaagttgaacaaagaa
ctagcttcagctgagcaaaataaaaatcatataaataatgagctaaaaaaaaaagaagag
caattgtccagttatgaagataaactgtttgatgtttgtggtagccaggactttgaaagt
gatttagacagacttaaggaagaaattgaaaaatcctccaaacagcgagccatgctggct
ggagccacagcagtttactcccaattcattactcagctagcagatgaaaaccagtcatgt
tgccctgtctgtcagagagtttttcagacagaggctgaattacaagaagttatcagtgat
ttacagtctaaactgcggcttgctccagataaactcaagtcaacagaatcagagctaaag
aaaaaggaaaaacgacgtgatgaaatgctgggactcgtgcccatgaggcaaagtataatt
gatttgaaagaaaaggaaataccagaattaagaaacaaactgcaaaatgtcaatagagac
atacagcgcctaaaaaatgacatagaagaacaggaaacgctcctgggtactgtaatgcct
gaagaagaaagtgctaaagtatgtctgacagatgttacaattatggagaggttccagatg
gaacttaaagatgttgaaagaaaaattgcacaacaagcagctaagctacaaggaatagac
ttagaccgaactgttcaacaagtaaaccaggaaaaacaagaaaaacaacacaaattagat
acagtttccagtaagattgaattaaatcgtaagcttatacaggaccagcaagaacagatt
caactcctaaaaagtaccacaaatgaactaaaatcagaaaaacttcagatatctagtaat
ttgcaacgtcgtcagcagctggaggagcagactgtggaattatccactgaagttcagtct
ttacacagagaaataaaggatgctaaagagcaggtgagccctttggaaacaacattggaa
aagttccagcaggaaaaggaagaattaatcaacaaaaaaaatacaagcaacaagatagca
caggataaactgaatgatatcaaagagaaggttaaaaatattcatggttatgtgaaagac
attgagaattatattgaagatgggaaagaggactataaaaagcaaaaagaaactgaactt
aataaagtaatagctcaactaagtgaatgtgagaaacacaaagaaaagataaataaagaa
atgggaatcatgagacaagatattgatacacagaagatacaagaaaggtggctacaggat
aaccttactttaagaaaaagaaacgaggaactgaaagaagtggaagaagaaagaaaacaa
catttgaaggaaatgggacaaatgcaggttttacaaatgaaaaatgagcatcaaaagttg
gaagagaacatagaaaatataaaaagaaatcatagtttggcattaggacgacagaagggt
tatgaggaagaaattattcattttaagagagaacttcgagaacctcaatttcgtgatgcc
gaggaaaagtatagagaaatgatgattgttatgagaacaacagagcttgtgaacaaggat
ctggacatttattataagacccttgaccaggcaataatgaaatttcacagtatgaaaatg
gaggaaatcaataaaattattcgtgacctttggcgaaatacataccgtggacaagatatt
gaatacatagaaattaggtctgatgctgatgaaaacgtatcagcatctgataaaaggcgg
aattataactaccgagtggtgatgctaaagggagacacagccttggatatgcgaggacga
tgcagtgctggacaaaaggtgttagcctcactcatcattcgtctggccctggctgaaaca
ttctgcctcaactgtggtatccttgccttggatgaaccaacaacaaatcttgaccgagaa
aacattgaatctcttgcacacgctttggttgagataataaaaagtcgctcacagcagcgt
aacttccagcttctggtaatcactcatgatgaagattttgtggagcttttgggacgttct
gaatatgtggagaaattctacaggattaagaagaacattgatcagtgctcagagattgtg
aaatgcagtgttagctctctgggatcttatgttcattaa

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