Otolemur garnettii (small-eared galago): 100954957
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Entry
100954957 CDS
T07855
Symbol
LTN1
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
oga
Otolemur garnettii (small-eared galago)
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oga03009
]
100954957 (LTN1)
04121 Ubiquitin system [BR:
oga04121
]
100954957 (LTN1)
Enzymes [BR:
oga01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100954957 (LTN1)
Ribosome biogenesis [BR:
oga03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
100954957 (LTN1)
Ubiquitin system [BR:
oga04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100954957 (LTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
UBC_like
LTN1_E3_ligase_5th
zf-RING_2
FANCL_C
zf-ANAPC11
zf-rbx1
RINGv
zf-RING-like
HipN
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
100954957
NCBI-ProteinID:
XP_003797138
Ensembl:
ENSOGAG00000003481
LinkDB
All DBs
Position
Unknown
AA seq
1766 aa
AA seq
DB search
MGGKNKQRTKGNLRPSNSGRAAELLAKEQGTVPGFIGFGTSQSDLGYVPAIQGAEEIDSL
VDSDFRMVLRKLSKKDVTTKLKAMQEFGTMCTERDTEVVKGVLPYWPRIFCKISLDHDRR
VREATQQAFEKLILKVKKQLAPYLKSLMGYWLMAQCDTYTPAAFAAKDAFEAAFPPSKQP
EAIAFCKDEITSVLQDHLIKETPDTLSDPQTVPEEEREAKFYRVVTCSLLALKKLICLLP
DNELDSLEEKFKSLFSQNKFWKYGKHTVPQIRSAYFELVSALCQRIPQLMKEEASKVSPS
VLLSIDDSDPVVCPALWEAVLYTLTTIEDCWLHVNAKKSVFPKLSAVVREGGRGLATVIY
PYLLPFISKLPQSITDPKLDFFKNFLTSLVAGLSTERTKTSFSESSAVISAFFECLRFIM
QQNLGEEEIEKMLINDQLIPFIDTVLRDSELQHGELFNHLAETLSSWEVKADMEKDDKTA
QKLENILLHFWERLSEICVAKINEPEAEVESVVGVSNLLQVLQKPKSSLKSNKKKNGKVR
FADEIPETTKDNEKSVSSEGEKNKTSESRNEPSLTPNSSDLLSPLRKKPLEDLVCKLSEM
SINYVNEQKSEQHLRFLSTILDSFASSQVFKILLGDEKQSIVKAKPLEIAKLAQKNPAVQ
FLYQKLIGWLNEDQRKDAGFLVDILYSALRCCDSDLERKDVLDDLTEVDLNWNSLLQIIK
KACSSSDKHALVTPWLKGNVLGEKMVTLADCLCNKDLKSRLSSESYFSERWTLLSLVLSQ
HVKNDYLIGEVYVERIIVKLHETLSETKKLSEAENSDSSVSFICDVAYNYFSSAKGCLLM
PSSEDLLLTLFQLCAQSKEKTHLPDFLICKLKNTWLSGVNLLVHQTGSTYRESTFLHLSA
LWLKNQVQSSSLDIKSLQLLLSAVDDLLNALLESEDSHLLRVYIGSVMPDNSEWEKMRQS
LPMQWLHRPLLEGRLSLNYECFKTDFKEQDIKTLPSHLCTSALLSKMILVALKKEIVLEN
NELEKIIAELLYSLQWCEELDNSPIFLTGFCEMLQKMNITYDNLHVLGNTSGLLQLLFNR
SREHGALWSLIIAKLIISRSISSDEVKPHYRRKESFFPLTEGNLHTIQSLCPFLSKEEKK
EFSAPCIPALLGWTKKDLCSTDGGFGHLAIFNSCLQTKSIDDGELLHGILKIIISWKNEH
EDIFLFSCNLSGASPEVLGINIEIIRFLCLFLKYCSAPLAESEWDFIMCSMLAWLETTSE
NQALYSLPLVQLFACVSCDLACDLSAYFDSTTQDTAGNLPVNLISEWKDFFSQGIHSLLL
PILVTVTGENKDISETSFQNAMLKPMCETLKYISKDQLLSHKLPARLVADQKTNLPEYLQ
TLLNTLAPLLLFRARPVQIAVYHMLYKLMPELPQYDQDNLKSYGDEEEEPALSPPAVLMS
LLSTQEDLLENVLGCVPVGQIVTIKPLSEDFYYVLGYLLTWKLILTFFKAASSQLRALYS
MYLRKTKSLNKLLYHLFRLMPENPTYSETAIEVSNKDPKTFFTEELQLSIRETATLPYHI
PHLACSVYHMTLKDLPAMVRLWWNSSEKRVFNIVDRFTSKYVSSVLSFQEISSVQTSTQL
FNGMTVKARATTREVMATYTIEDIVIELIIQLPSNYPLGSITVESGKRVGVAVQQWRNWM
LQLSTYLTHQNGSIMEGLALWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKK
FHSACLYKWFTSSNKSTCPLCRETFF
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggaagaacaagcagcggacgaaagggaaccttaggccttcaaacagtggtcga
gctgcagaactccttgccaaagaacagggaaccgtgcctggatttattggttttggaaca
tctcagagcgatctaggctatgttcctgctattcaaggagctgaagaaattgacagcctt
gtagattctgatttccgaatggtgctgcggaagctttctaagaaagatgtcacaacaaaa
ttaaaagcaatgcaagaatttggaaccatgtgtacagagagagacacagaagttgtaaaa
ggagttcttccatattggccaagaattttctgcaaaatttcacttgatcatgaccgccgg
gttcgagaagccacacagcaagcttttgaaaaacttatccttaaagtaaagaaacagttg
gctccctatttaaaaagtttaatgggatattggctaatggctcagtgtgatacttataca
ccagctgcgtttgcagcaaaagatgcatttgaagcggcttttcctccaagcaagcaacca
gaagccatagcattttgtaaggatgaaattacaagtgtgctgcaggatcatcttataaaa
gaaacacctgatacactcagtgatccacaaactgttccagaggaagaaagagaagctaaa
ttctaccgagttgtaacttgttccttattggcattaaagaaattgatttgccttttacct
gacaatgagcttgattctctggaggagaaatttaagtctcttttttcacagaataaattt
tggaagtatggaaaacacactgtacctcagattcgctcagcttattttgagttagtttct
gctttgtgccagcgcattccacagttaatgaaagaggaagcctccaaagtgagtccctcc
gtcctactcagcattgatgacagtgacccagttgtctgcccagctctctgggaagctgta
ctttatacacttacaactattgaggactgttggcttcatgtaaatgcaaaaaaaagtgtt
tttcccaagctgtccgctgtggttcgtgaaggtggtcggggtctagctactgttatatat
ccttatcttctgccattcatcagcaaactccctcagtccattacagatccaaagttggat
ttcttcaaaaatttcctcacctctctggttgcagggctgtcaacagagagaacgaaaacc
agcttttcagagagctcagcagtaatatctgctttctttgaatgtttgcgttttataatg
cagcaaaacttaggtgaggaagagattgaaaagatgctcatcaatgatcagttgatccca
tttattgacactgttctcagagactcagaattgcaacatggggagctgtttaaccattta
gcagaaactttaagttcctgggaagtcaaagcagacatggaaaaagatgataaaacggct
cagaagttggagaacatactactgcatttctgggagagactgtcagagatctgtgtcgcg
aaaatcaatgagccagaagctgaagttgagtctgttgtgggtgtgtcaaacctgctacag
gttcttcagaagccaaagagctcactgaagtcaaataaaaaaaaaaatggtaaagttaga
tttgctgatgagatacccgaaactactaaagacaatgaaaaaagtgtatcttcagaagga
gagaagaataaaacctcggaatcaaggaatgaaccgtctctcactcctaactcttcagac
cttttgtctcctttaaggaaaaagcctttggaagacttagtctgtaaactctcagagatg
agtattaattatgtcaatgaacaaaaatcagagcaacatctaaggtttctttctactata
cttgactcctttgcttcaagccaagtatttaaaatactgcttggtgatgaaaaacagagt
attgtcaaagccaaacctcttgaaatagccaaacttgcacaaaaaaatcctgcggtgcag
tttttataccagaaactaataggttggctaaatgaagaccaaaggaaggatgctggtttc
ctggtagacattttgtacagtgcccttcgttgctgtgacagtgacttggaaagaaaagat
gtcttggacgatcttactgaggtggacctgaattggaattcgcttcttcagattattaaa
aaggcatgttctagttcagataaacatgctttagtaactccttggctgaaaggtaatgtc
cttggagagaaaatggtaaccttggcagattgtctttgtaataaggacttgaaatccaga
ctatcttcagaatcttacttctcagaaagatggactcttctaagtttggtattatcccaa
catgttaaaaatgattacttgattggagaagtatatgttgaaagaattattgttaaactc
catgaaactttatccgaaacaaagaaattgtcagaagctgaaaatagtgactcatcagtg
tcttttatctgtgatgtggcctataattatttcagctcagcaaaaggatgcttgctaatg
ccatcatctgaagatttattattaactctctttcagttatgtgctcagagcaaagaaaaa
acacatttgccagattttcttatctgtaaactgaaaaacacttggctctctggtgtaaat
ttattggttcatcaaactggcagtacatacagagaaagtaccttcctacatttgtctgct
ctgtggctgaagaaccaagttcagtcctcatctttggatatcaaaagtcttcaactcctc
ttatctgctgttgatgatttgctgaatgcacttctggagagtgaggattctcatcttctg
agagtttacattggaagtgtaatgccagacaatagtgaatgggaaaagatgagacaatct
cttcctatgcagtggttacatagacctcttttagagggaagactaagtttgaattatgag
tgtttcaaaacagattttaaggaacaagatataaagacacttcccagccatttatgtact
tcagcattattgagcaaaatgatcttagttgcactgaaaaaggaaatagtcctagagaat
aatgaactcgagaaaataattgcagagctactgtattcactgcagtggtgtgaagaatta
gacaattctcctatttttctaactggattttgtgaaatgcttcaaaaaatgaatattaca
tatgataacttacatgtacttggtaatacttctggccttttgcagctgttatttaacaga
tctagggaacatggcgcactttggtctcttattattgctaagttgattatttcccgaagc
atttcatctgatgaagtaaaaccacattataggagaaaagaaagtttttttccattaacc
gaaggcaatttgcataccattcaaagtctgtgtccatttttgtcaaaagaagaaaagaaa
gaatttagcgccccgtgtatacctgctcttttgggctggactaaaaaagacctttgcagt
actgatggtggttttggacatcttgctattttcaattcttgtctgcagacaaaaagcata
gatgatggagagttattgcatggtatattaaaaatcataatatcctggaagaacgaacat
gaagatatttttcttttcagttgtaatctgtcaggagcaagtccagaggttttgggtata
aatatagaaataattcgtttcctttgcctatttctgaaatactgctcagctcctttggca
gagagtgaatgggacttcatcatgtgctccatgttggcttggttggagacaacaagtgag
aatcaggcattatattctcttccactcgtgcaactgtttgcctgtgtcagctgtgatttg
gcctgtgacctcagtgcttattttgattccacaactcaggatactgctggcaatcttcct
gtaaatctaatcagtgaatggaaagactttttttctcaaggcatccacagtttgctttta
cctattttggtgactgttacaggagaaaacaaagacatatctgaaacatcctttcagaat
gcaatgctgaagcccatgtgtgaaacattaaaatatatttccaaagatcagcttttgagt
cacaaacttcctgcaagattggttgctgaccaaaaaacaaacttgccagaatatctccag
actttgctgaatacattggccccgctactcctcttcagagctagacctgtgcaaattgct
gtttatcatatgttatacaaattgatgcctgagttaccacaatatgatcaggataatcta
aagtcttatggagatgaagaagaagaaccagccttgtcaccaccagcagtgctgatgtct
cttcttagcactcaagaggatttattggaaaatgttttggggtgtgttcctgttggacag
atagttactattaagccactgagtgaagacttctattatgttctgggatacctcctcact
tggaaattaatacttactttcttcaaagctgcttcctctcagcttcgggctctgtattca
atgtaccttcggaaaacaaagagtttgaataaattgctttatcacctgttcaggcttatg
ccagaaaacccaacctattcagagacagctattgaggtctcaaataaggaccctaaaaca
ttctttactgaggagctccagctgagtattagagaaacagcaactcttccgtaccatatt
ccacacttggcttgttcagtctatcacatgacattgaaagacttgcctgccatggttagg
ttgtggtggaatagcagtgagaagcgtgttttcaatattgtagatagatttacaagcaag
tatgtcagcagtgttctttcttttcaagaaatatcttctgtgcaaacaagtacacaactg
tttaatggcatgacggttaaagctcgagctactactcgagaagtaatggctacttatact
attgaggacatagtcattgaacttattatacagttgccttcaaattacccgctgggttca
ataacggtggaaagtgggaagagagttggcgtggctgttcagcagtggcggaactggatg
ctgcagctgagcacctacctcacccatcagaatggaagtataatggaaggcttagcattg
tggaaaaataatgtagacaaacgttttgagggtgttgaagattgtatgatctgtttctca
gtcattcatggtttcaactattctcttcccaaaaaagcctgtagaacatgcaagaaaaag
ttccattcagcctgcttgtacaaatggtttacatctagcaacaaatccacttgtccactc
tgtcgggagacctttttctga
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integrated database retrieval system
