Otolemur garnettii (small-eared galago): 100955141
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Entry
100955141 CDS
T07855
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03008
Ribosome biogenesis in eukaryotes
oga05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100955141 (DROSHA)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
100955141 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oga03019
]
100955141 (DROSHA)
03009 Ribosome biogenesis [BR:
oga03009
]
100955141 (DROSHA)
03036 Chromosome and associated proteins [BR:
oga03036
]
100955141 (DROSHA)
Enzymes [BR:
oga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
100955141 (DROSHA)
Messenger RNA biogenesis [BR:
oga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
100955141 (DROSHA)
Ribosome biogenesis [BR:
oga03009
]
Eukaryotic type
90S particles
RNase
100955141 (DROSHA)
Prokaryotic type
rRNA processing factors
100955141 (DROSHA)
Chromosome and associated proteins [BR:
oga03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
100955141 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
5_3_exonuc
YcaO
Motif
Other DBs
NCBI-GeneID:
100955141
NCBI-ProteinID:
XP_012662503
Ensembl:
ENSOGAG00000005424
LinkDB
All DBs
Position
Unknown
AA seq
1367 aa
AA seq
DB search
MMQGSTCHRMSFHPGRGCPRGRGGHGARPSAPAFRPQNLRLLHPQQPPVQYQYEPPSAPS
TTFSNSPAPSFLPPRPDFVPFPPPMPPSAQGPLPPCPVRPPFPNHQMRHPFPVPPCFPPM
PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPAMPQQINYQYPPGYSHHNFPPP
NFSSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGR
GERHRSLDRRERGRSPDRRRQDTRYRSDYERGRTPSRHRSYERSRERERERHRHRDNRRS
PSLERSYKKEYKRSGRSYSLSVVPEPAGCTPESPGESIKNTDSWAPPLEVVNHRSPSREK
KRARWEEEKDRWSDSQSSGKEKNYTSIKEKDPEETLPDKNEEEEEELLKPVWIRCTHSEN
YYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESS
SESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSA
KARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLSWSSFMYSVVKSLKT
DPRFLLQIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELYDWNLKGP
LFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIANMLQWEE
LEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQLSYAGD
PQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTVELSSQGF
WKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHPSHHLNFG
MNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPSRINHNER
LEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHG
PDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLNYPLHPLQ
LQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLGHNQRME
FLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAITNDKTK
RPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQ
CCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMD
ALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPDEAEDIKK
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaggcagtacatgccatagaatgtcgttccacccaggacgtggatgtcctcga
ggacgaggaggacatggagccagaccctcagcaccagccttcagaccccaaaatctgaga
ctgcttcaccctcagcagcctccggtgcaatatcaatatgaacctccaagtgccccttcc
actactttctcgaactctccagcccccagttttctgcctccacgaccagactttgtaccc
ttccctccacccatgcctccctcagcacaaggccctcttcccccctgtccagtcaggcct
cctttccccaaccaccagatgaggcaccccttcccagttcctccctgctttcctcccatg
cctccccccatgccctgtcccaataacccgcctgtccctggagcacctcccgggcaaggc
actttccccttcatgatgccaccaccttccatgcctcaccctccgccccctccggccatg
ccacagcagattaattatcagtaccctccaggatactcacatcacaacttcccacctccc
aattttagtagtttccagaacaacccaagttctttcttgcccagtgccaataacagcagt
agtcctcatttcaggcatctccctccttacccactcccaaaagctcccagtgaaagaagg
tccccagaaaggctcaaacactatgatgatcaccggcaccgagatcacagtcatgggcga
ggggagcggcatcggtccctagatcggcgggagagaggccgcagtcctgacaggagaagg
caagatacccgctacagatctgactatgaacgggggagaacgccgtcccgccaccgcagc
tatgagcgcagcagagagcgagaacgggagagacacaggcatcgggacaaccgaagatca
ccatctctggaaaggtcctacaaaaaagagtataagagatctggaaggagttacagttta
tcggttgttcctgaacctgctggatgcacaccagaatcaccaggggagagtattaaaaat
acagattcttgggccccacccctggaggttgtgaatcatcgctccccaagtagggagaag
aagagagctcgttgggaggaagagaaagacagatggagtgacagccagagctccggcaaa
gagaagaactacacctccatcaaggagaaggatcccgaggagacgctacctgacaaaaat
gaggaggaagaagaagaacttctcaagccagtgtggattcgatgtacccattcagaaaac
tactactccagtgaccccatggatcaggtgggagactctactgtggttggaacaagtagg
ctccgtgacttatacgacaagtttgaggaagagctgggcagcaggcaggagaaggccaaa
gctgccaggcctccgtgggaacctccgaagaccaagctcgacgaagatttagagagttcc
agtgaatctgagtgtgagtctgatgaggacagcacctgttccagtagctcggactcggaa
gtgtttgacgttattgcagaaatcaaacggaagaaggcccaccctgaccggcttcatgat
gagctctggtacaatgacccaggccagatgaatgatggaccactctgcaagtgcagcgca
aaagcgagacgcacggggattaggcacagcatttaccctggagaagaggccatcaagccg
tgtcgtcctatgaccaacaatgctggcagacttttccactaccggatcacagtctcccct
cctacgaactttttatcgtggtcgagcttcatgtacagtgttgttaagagcttaaaaact
gacccccgcttcttattgcagattccactgtgtaaagtaattagattcaacatagactac
accatccatttcattgaagagatgatgcctgagaatttttgtgtgaaagggcttgaactc
ttttcactgttcctattcagagatattttggaattatatgactggaatcttaaaggtcct
ttgttcgaagatagtcctccctgctgcccaagatttcatttcatgccacgttttgtaaga
tttcttccagatggaggaaaggaagtgctgtccatgcaccagatcctcctctacctgctg
cgctgcagcaaggcgctggtgcccgaggaggagatcgccaacatgctgcagtgggaggag
ctcgagtggcagaagtacgcggaggagtgcaaaggcatgatcgtcaccaaccctggcacg
aaaccgagttctgtccgtattgatcaactggatcgtgaacagttcaaccccgatgtgatt
acttttccgattatcgtccactttgggatacgccctgcacagttgagttatgcaggagac
ccacagtatcagaaactgtggaagagttacgtgaaactacggcatctcctagcaaacagt
cccaaggtcaaacaaactgataaacagaagctggcccagagggaggaagcactccaaaaa
atacgacagaagaacacaatgaggcgagaagtaacagtggagctgagtagccaaggattc
tggaaaaccggcatccgttccgacgtctgccagcatgcaatgatgctacctgttttgacc
catcatatccgttaccaccaatgcctaatgcatctggacaagttgataggatacactttt
caagatcgttgtctattacagctggccatgactcatccaagtcatcatttaaattttgga
atgaatcccgaccatgccaggaattctttatctaactgtggaattcggcagccaaaatac
ggagacagaaaagttcatcacatgcacatgcggaaaaaaggaattaacactttaataaat
attatgtcacgccttggccaagatgacccaactccctcaaggattaaccacaatgaacgg
ttggagttcctgggtgatgctgttgttgaatttctgaccagtgtccatttgtactatttg
tttcctagtctggaagaaggaggattagcgacctatcgaacggccatcgttcagaatcag
caccttgccatgctagcaaagaaacttgaactggatcgatttatgctgtatgctcatgga
cctgacctttgtagagaatcagaccttcggcatgcaatggctaattgttttgaagcatta
ataggagctgtttacttggagggaagtctggaggaagccaaacagttatttggacgctta
ctctttaatgatccggacctgcgtgaagtctggctcaattatcctctgcacccactccaa
ctacaggaaccaaataccgatcgacaacttattgaaacgtctccagttctgcagaaactt
actgagtttgaagaagcaattggagtaatttttactcatgttcgacttctagcaagggca
ttcacattgagaactgtgggatttaaccatctgaccctaggccacaatcagaggatggaa
ttcttgggtgattccataatgcaactggtagccacagagtatttattcattcatttccca
gaccatcatgaaggacatttaactctgttacgaagctctttggtgaataacaggactcag
gccaaagtggcagaggagctgggcatgcaggagtacgcgataaccaacgacaagaccaag
cggcccgtggccctccgcaccaagaccttggcagaccttttggagtcgtttatcgcagct
ctctacattgacaaggacctggagtacgttcatactttcatgaacgtctgcttcttccca
cgattaaaagagttcattctgaatcaggactggaatgaccccaagtcccagcttcagcag
tgctgcttgaccctcaggacggaagggaaagagccggatattcctctgtacaagactctg
cagacagtggggccatcccatgctagaacctacactgtggctgtttatttcaaaggagaa
agaataggctgtgggaaaggaccaagcattcagcaagcagaaatgggagcagcaatggat
gcactagaaaaatataactttccccagatggcccatcagaagcggttcattgaacggaag
tacagacaagagttaaaagaaatgaggtgggaaagagagcatcaagagagggagccagat
gaggctgaagacataaagaaatga
DBGET
integrated database retrieval system