Otolemur garnettii (small-eared galago): 100955440
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Entry
100955440 CDS
T07855
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
oga
Otolemur garnettii (small-eared galago)
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oga03041
]
100955440 (DDX1)
03016 Transfer RNA biogenesis [BR:
oga03016
]
100955440 (DDX1)
Enzymes [BR:
oga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100955440 (DDX1)
Spliceosome [BR:
oga03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100955440 (DDX1)
Transfer RNA biogenesis [BR:
oga03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
100955440 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Paramyxo_PNT
Motif
Other DBs
NCBI-GeneID:
100955440
NCBI-ProteinID:
XP_003787450
Ensembl:
ENSOGAG00000008730
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLMKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPAHMKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKAPDSYTVKSQHTGNAQVTQTKFLPNAPKALIVEPSRELAE
QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDDVHAKDNTRPGAN
SPEMWSEAVKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVASEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttttctgagatgggtgttatgcctgagattgcacaagctgtggaggagatg
gattggcttctcccaactgatatccaggctgagtctatccccctgatcctaggaggaggt
gacgtcctcatggctgcagaaacaggaagtggaaaaactggtgctttcagtattccagtt
atccagatcgtttatgaaactctgaaagatcaacaggaaggtaaaaaaggaaaaacaaca
attaaaactggtgcttcagtactcaacaaatggcagatgaacccatatgatagaggatct
gcttttgcaattggatcagatggcctttgttgtcaaagcagagaagtaaaggaatggcat
gggtgtagagctactaaaggattaatgaaagggaaatactactatgaagtatcctgtcat
gaccaaggattatgcagagttggctggtctactatgcaggcctccttggacctaggtact
gacaagtttggatttggctttggtggaacaggaaagaaatctcataataaacaatttgat
aattacggagaggaattcactatgcatgataccattggatgttacctagatatagataaa
gggcatgtcaagttttccaaaaacggaaaagaccttggtctggcgtttgaaataccagca
catatgaaaaatcaagccctttttcctgcttgtgttttgaagaatgctgaactaaaattt
aacttcggggaagaagaattcaagtttccaccaaaagatggttttgttgctctttccaag
gcacctgatagttacactgtcaaatcacaacacacaggtaatgcacaggtaacacaaaca
aagtttctccccaatgctccaaaagctctcattgttgaaccatcccgggagttagctgaa
caaactttgaataacatcaagcagtttaagaaatatattgataatcctaaattaagggag
cttctgataattggaggtgttgcagcacgggatcagctctctgttttggaaaatggggta
gatatagttgtaggcactccaggaagactggacgacttggtgtcaactggaaaactgaac
ttatctcaagttagattcctggtccttgatgaagctgatgggctgctttctcaaggttat
tctgattttataaataggatgcacaatcagattcctcagattacctctgatggaaaaaga
cttcaggtgattgtttgctctgccactttgcattcttttgatgtaaagaaattatctgaa
aagataatgcattttcctacatgggttgatttaaaaggagaagattctgttccagatact
gtacaccatgttgttgtcccagtgaatcccaaaaccgacagactctgggaaaggcttgga
aagaaccacattagaactgatgatgtacatgcaaaagataacacaagaccaggggctaac
agtccagaaatgtggtctgaagctgttaaaattctgaagggggagtatactgtccgggca
atcaaggaacataagatggatcaagcaattatcttctgtagaaccaagattgactgtgat
aacttggagcagtattttatgcaacaaggaggaggacctgataaaaaagggcatcagttc
tcatgtgtttgtcttcatggtgacagaaagcctcatgagagaaagcaaaacttggaaaga
tttaagaaaggagatgtaagattcttgatttgcacagatgtagctgctagaggaattgat
attcatggagttccttatgttataaatgtcactctacctgatgaaaagcaaaactatgta
catcgaattggcagagtaggaagagccgaaagaatgggtctggccatttccctggtggca
tcagagaaagaaaaggtttggtaccatgtatgtagcagtcgtggaaagggatgttataac
acaagactcaaggaagatggaggctgtaccatatggtacaatgagatgcagttgctatct
gagatagaagaacacctgaactgtaccatttctcaggttgagccagatataaaggtacca
gtggatgaatttgatggaaaagttacctatggtcaaaaaagggctgctggtggtggaaat
tataaaggccatgtggatattttggcacctaccgttcaggagttggctgcccttgaaaag
gaagcacagacatctttcctacatcttggctaccttcctaaccagctgttcagaaccttc
tga
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