Otolemur garnettii (small-eared galago): 100955833
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Entry
100955833 CDS
T07855
Symbol
DDX41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
100955833 (DDX41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oga03041
]
100955833 (DDX41)
Enzymes [BR:
oga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100955833 (DDX41)
Spliceosome [BR:
oga03041
]
Complex C
Other components
Complex C specific factors
100955833 (DDX41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
ResIII
Utp25_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
100955833
NCBI-ProteinID:
XP_012668829
Ensembl:
ENSOGAG00000011123
UniProt:
H0X458
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MEESEPERKRTRTDEATAGGSRSEAEDEDDEAYVPYVPLRQRRQLLLQKLLQRRRKGAAE
EEQPDSGSEPQGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESV
AEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPI
KSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI
MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG
MSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT
IFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAK
MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE
GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC
DESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEA
MQTKQVSNIGRKDYLAHSSMDF
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtcggaacccgagcggaagcggactcgcaccgacgaggcaactgctggagga
agccgctccgaggcggaagatgaggacgacgaagcttatgtaccttatgtgccgttaaga
caacggcggcaactactgcttcagaagcttcttcaacgaagacgcaagggagctgcagaa
gaggagcagcccgacagcggcagtgagccccaaggagatgaggatgacatcccactcggc
cctcagtccaacgtcagtctcttggatcagcaccaacacctcaaagagaaggctgaagcc
cgcaaggagtcagccaaggaaaaacagctgaaagaagaagagaaaatcctggagagtgtg
gctgagggccgagccttgatgtcagtgaaggagatggctaaaggcatcacttacgatgac
ccaatcaaaaccagctggacaccgccccgttatgtcctgagcatgtctgaagagcggcat
gagcgtgtacggaagaaataccacatcttggtggagggagatggtatcccaccacccatc
aaaagcttcaaggaaatgaagtttcctgcagccatcttgaggggcctgaagaagaaaggc
atccaccacccaacacctattcagatccaaggcatcccaacaattctatctggccgtgac
atgattggcattgctttcacgggttcaggcaagacactggtgttcacactgcctgtcatc
atgttctgcctagagcaggagaaaaggttacctttctctaagcgtgaagggccctacgga
ctcatcatttgcccctcgcgggagctagcccgccagacccatggcatcctggagtactac
tgccgcctgctgcaggaagacagctcaccactcttgcgctgtgctctctgcattgggggc
atgtctgtcaaagagcagatggagaccatccgacatggtgtacacatgatggtggccacc
cctgggcgcctcatggatctgctgcaaaagaagatggtcagcctagacatctgtcgctac
ctggcccttgatgaggctgaccgcatgattgacatgggctttgagggagacatccgcacc
attttctcctatttcaagggccagcggcagactctactcttcagtgccaccatgcccaag
aagattcagaactttgccaagagtgcccttgtaaagcctgtcaccatcaacgtgggtcgt
gctggggcagccagcctggatgttatacaggaggtagaatatgtgaaggaggaggctaag
atggtgtacctgctcgagtgcctgcaaaagacacctccacctgtgctcatctttgcagag
aagaaggcagatgtggatgccatccatgagtacctgctgctcaagggggttgaggctgtg
gccatccatgggggcaaagatcaggaagaaagaaccaaggccatcgaggcattccgagaa
ggcaagaaggatgtcttagtggccacagacgtagcctccaagggcctggacttccctgcc
atccagcatgttatcaattatgacatgcccgaggagatcgagaactatgtgcatcggatt
ggccgcactgggcgctcaggaaacacaggcatcgccaccaccttcatcaacaaggcctgt
gatgagtcagtcctgatggatctcaaagccctgctgctggaagccaagcagaaagtgcca
cctgttctgcaagtgctgcactgcggggatgaatccatgctggacattggaggagagcgt
ggctgtgccttctgcgggggcctgggccatcggatcactgactgccccaaactcgaggct
atgcaaaccaagcaggtcagcaacattggccgcaaggactacctggcccacagctccatg
gacttctga
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