Otolemur garnettii (small-eared galago): 100956235
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Entry
100956235 CDS
T07855
Symbol
ERCC3
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPB subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03022
Basal transcription factors
oga03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100956235 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
100956235 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oga03021
]
100956235 (ERCC3)
03400 DNA repair and recombination proteins [BR:
oga03400
]
100956235 (ERCC3)
Enzymes [BR:
oga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100956235 (ERCC3)
Transcription machinery [BR:
oga03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100956235 (ERCC3)
DNA repair and recombination proteins [BR:
oga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100956235 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
100956235
NCBI-ProteinID:
XP_003800388
Ensembl:
ENSOGAG00000009103
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MGKRDRADRDKKKSKKRHYEDEEEDEDDAPGNESHEAVPSAAGKQVDESGTKVDEYGAKD
YRVQMPLKDDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTA
YSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESS
HPDVIQHLLQDPVIRECRLRNAEGEATELITETFTSKSAISKTAEGSSGPSTSRVTDPQG
KSDIPTDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRND
SVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR
CLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRS
WEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDL
NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK
FRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP
KINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFY
SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAAT
DLDAEEEVVAGEFGSRSSQASRRFGTMSSLSGADDTVYMEYHSSRSKATAKHVHPLFKRF
RK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagagagacagggcagaccgcgacaagaagaagtccaagaagcggcactacgag
gatgaagaagaggatgaagacgacgcccctgggaacgaatctcacgaagcggtcccctcg
gcggccgggaaacaggtggatgagtctggcaccaaagtggatgaatatggagccaaggac
tacagggtgcagatgccgctgaaggacgaccacacctccagacccctgtgggtggctcct
gatggccatatcttcttggaagccttctctccagtttacaaatatgcccaagacttcctg
gttgccattgcagagccagtgtgccgaccaacccatgtacatgagtacaaactaactgcc
tactccctatatgcagccgtcagcgttgggctgcaaaccagtgacatcactgagtacctg
cggaagctcagcaagactggagtccctgatggtattattcagtttattaagttgtgtact
gtcagctatggaaaagtcaagctggtcctgaagcacaacaggtactttgttgaaagctcc
caccctgatgtcatccagcatctcctccaagaccccgtgatccgggaatgccgcctgagg
aacgctgaaggggaggccacggagctcatcacagagactttcacaagcaaatctgctatt
tctaagactgctgaaggtagcagtggcccctccacttcccgagtgacagatccacagggt
aaatctgacattcctacagacctatttgacttttatgagcaaatggacaaggatgaggaa
gaagaagaagagacacagacggtatcttttgaagtcaaacaggaaatgattgaggagctc
caaaaacgttgtattcacctagaatatcctctgctggcagaatatgacttccggaatgat
tctgtcaaccctgatatcaacattgatctgaaacccacagctgtcctcagaccctatcag
gagaagagcttgaggaagatgtttgggaatgggcgtgcgcggtcaggggtcattgttctt
ccttgcggtgctgggaagtccctggttggtgtgactgctgcatgtactgtcaggaaacgc
tgtctggtgctaggcaactcggcagtgtctgtagaacagtggaaagcccaattcaagatg
tggtccaccattgatgacagccagatctgccgcttcacctctgatgccaaggacaagccc
ataggctgctccattgccattagcacgtattccatgctgggccataccaccaaaagatcc
tgggaggctgagcgagtcatggagtggctcaaaacccaggagtggggcctcatgatcctg
gacgaagtgcacaccataccagccaagatgttccgaagggtgctcaccatcgtgcaggcc
cactgcaagctaggtttaactgcaacccttgtccgggaggatgataaaatcgtggactta
aatttcctgattgggcctaagctatatgaagccaactggatggagctgcagaacaatggc
tacatcgccaaagtccagtgtgcagaggtttggtgcccaatgtcccctgagttttaccgg
gagtatgtggcaattaaaaccaagaaacgaatcttgctgtataccatgaatcccaacaaa
ttcagggcttgccagtttctgatcaagtttcatgaaagaaggaatgacaagattattgtc
tttgctgacaacgtgtttgccctgaaggaatatgccattcggctgaacaaaccctatatc
tatgggcctacgtcccaaggagaaaggatgcaaattctccagaatttcaaacacaacccc
aaaatcaacaccatctttatatctaaggtaggtgacacatcatttgaccttccagaagca
aatgttctcattcagatctcttcccatggtggctccaggcggcaggaggcgcagaggcta
gggcgggtgcttcgagccaaaaaagggatggtcgcagaggagtacaatgccttcttctac
tcactggtgtcccaagacacacaggaaatggcctactcaactaagcggcagagattcttg
gtagatcaaggttacagctttaaggtgatcacaaagcttgctggcatggaggaggaagac
ttggcattttcaacaaaagaagagcaacagcagctcttacagaaagtcctggcagccaca
gacctggacgccgaggaggaggtggtcgcgggggagtttggctccagatccagccaggca
tcacggcgctttggcaccatgagctccttgtctggggccgatgacaccgtgtacatggag
taccactcgtcacggagcaaggccacagcaaaacacgtgcacccactcttcaagcgcttt
aggaaatga
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integrated database retrieval system
