Otolemur garnettii (small-eared galago): 100956295
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Entry
100956295 CDS
T07855
Symbol
EXOSC10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100956295 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oga03019
]
100956295 (EXOSC10)
Messenger RNA biogenesis [BR:
oga03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
100956295 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-GeneID:
100956295
NCBI-ProteinID:
XP_012662705
Ensembl:
ENSOGAG00000013662
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MAPPSPRERKAPSSASTTKSDGEMVLPGFPDADSFVKGILLDEAAGVNKNQQPVLPAGLQ
VPKTVVSSWNRKAGEYGKKTKSETFRLLHAKNIVRPQLKFREKIDNSNTPFLPKIFIKPN
AQKPLPQALSKERRERPQDRPEDLDVPPALADFIHQQRTQKVEQDMFAHPYQYELDHFTP
PDSVLQKPQPQLYRPIEETPCHFVSSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTC
LMQISTRTEDFVIDTLELRSDLYILNESFTDPAIVKVFHGADSDIEWLQKDFGLYVVNMF
DTHQAARLLNLGRHSLDHLLKLYCNVESNKQYQLADWRIRPLPEEMLSYARDDTHYLLYI
YDKMRLELWERGGGRPVQSQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQL
TAFQLLFAWRDKTARREDESYGYVLPNHMMLKIAEELPKEPQGIIACCNPVPPLVRQQIN
EMHLLVQQAREMPLLKSEIGTGVKKSGPLPSTERLENVLFGPHDCSHAPPDGNSAVPTNG
SVPFQKQASLFPDQKEETSLDTRCLVAAAVITLFNEPSAEENGKGPLTVAQKKAQSIMES
FENPFRMFLPSRGHCAHISEAAKFDPSTKIYEISNRWKLASQVQVQKESKETVKKKAARQ
TATQEQVKEKQEAAEEPALSVRQQVALESAAKKRERTMSDPRTTEQKQEKKRLKVSKKPK
DSDLPEKDFTPYDYSQSDFKAFAGNSKSKPSSQFDPNKQTPSGKKCIAAKKLRQSVGNKS
MSFATGKSDRGFRYNWPKR
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcccagtcctcgggagcgtaaggccccatcatcggccagcacaaccaagtct
gacggggagatggtattgccgggcttcccggacgcagacagcttcgtaaagggtatttta
ctggacgaagcagcaggtgtaaataagaatcaacagcctgtcctccctgctgggttgcag
gtccccaaaacagtggtgtccagctggaaccgtaaggcaggagaatatggcaaaaaaaca
aaatctgaaactttccggctgcttcatgcaaaaaacatcgtccgacctcagctcaagttt
cgagagaagatcgacaattccaacacaccatttcttcctaaaatcttcatcaagcccaat
gctcagaaacccctccctcaggctctctccaaagaaaggcgggaacgcccgcaggatcgt
cctgaggacttggatgtcccccctgcactggcagatttcatccatcagcagagaacccag
aaggtggagcaggacatgtttgcacatccttaccagtatgaattagatcactttactcca
ccagattcagtacttcaaaagccacaaccccagctgtacaggcctatagaagaaacaccc
tgccattttgtatcttccctggatgaacttgtagagctcaatgaaaagctcttgaattgt
caagagtttgcggtagacttggagcaccactcctacaggagcttcctgggactgacttgc
ctgatgcagatctctactcggacagaagacttcgtcattgacactctcgagcttcgaagt
gacttgtacattctcaatgagagcttcacagacccagccattgttaaggtcttccacggt
gctgactcagacatagagtggctacagaaagacttcgggctgtatgttgtgaacatgttt
gatacccatcaggcagcccgccttcttaacctgggcaggcactcactcgaccatctgctg
aaactttactgcaatgtggagtccaacaagcagtatcagctggctgattggagaatacgc
cctctgcctgaggaaatgctcagctacgcccgggatgacacccattacctgctctacatc
tatgacaagatgaggctggagctgtgggagcgcggtggaggccggcccgttcagtcgcag
gtggtgtggcagcggagcagggacatctgcctcaagaaatttatcaaacctatctttacg
gatgagtcctaccttgaactatatagaaagcaaaagaagcatctcaacacacagcagttg
acagcatttcagctactttttgcctggagagataaaacagctcgcagggaagatgaaagc
tacggatatgtactaccaaaccatatgatgctgaagatagccgaagaactgcctaaggaa
cctcagggcatcatagcttgttgcaacccagtcccacctcttgtacggcagcagatcaat
gaaatgcatcttttagtccagcaggctcgagaaatgcccctgctcaagtctgaaattggc
actggagtgaagaagagtggaccactgcccagcaccgagagattggagaatgttctcttt
ggacctcatgactgctcccatgccccaccagatggcaactcagctgtcccaaccaatgga
tctgtgccatttcagaaacaggcgagcctcttccctgaccaaaaagaagagacgtcactg
gacaccaggtgccttgttgctgcagctgtgatcacattatttaatgaacctagtgctgaa
gaaaatggaaagggtccattaacagttgcacagaagaaagcccagagcataatggagtcc
tttgaaaacccctttaggatgttcctgccttcacgaggacactgtgctcacatctctgag
gcagcaaagttcgatccatcaacgaaaatctatgaaatcagcaaccgttggaaactggca
agccaggtacaggtacaaaaagaatctaaagagactgtcaagaagaaggcagccagacaa
acagctactcaggaacaggtgaaggaaaagcaggaagccgcagaggagccagctctctcc
gtccgacaacaggtcgcactggaaagtgctgctaagaagagagagcggacgatgagcgac
cccaggaccacagaacagaagcaggagaagaagcgactcaaagtttccaagaagcctaag
gactcagatctgcccgagaaagattttaccccttatgactacagccagtcagacttcaag
gcctttgctggaaacagcaaatccaaaccttcttcccagtttgatccaaataagcagacc
ccatctggcaagaagtgcattgcagccaagaaacttagacagtcagtgggaaacaaaagc
atgtcctttgcaactgggaagtcagacagaggcttcaggtacaattggccaaagagatag
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