Otolemur garnettii (small-eared galago): 100956411
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Entry
100956411 CDS
T07855
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03410
Base excision repair
oga04140
Autophagy - animal
oga04217
Necroptosis
oga04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100956411 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100956411 (HMGB1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100956411 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oga03036
]
100956411 (HMGB1)
03400 DNA repair and recombination proteins [BR:
oga03400
]
100956411 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oga04147
]
100956411 (HMGB1)
Chromosome and associated proteins [BR:
oga03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
100956411 (HMGB1)
DNA repair and recombination proteins [BR:
oga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
100956411 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
100956411 (HMGB1)
Exosome [BR:
oga04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100956411 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
NOA36
Motif
Other DBs
NCBI-GeneID:
100956411
NCBI-ProteinID:
XP_012665454
Ensembl:
ENSOGAG00000003205
UniProt:
H0WMA9
LinkDB
All DBs
Position
Unknown
AA seq
210 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEDEEE
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgtcgggaggagcacaagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagatatggcaaaggcggacaaggcccgttacgaaagagaaatgaaaacctatatccct
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gcctttttcttgttctgttctgagtatcgccccaaaatcaaaggagaacatcccggccta
tccattggtgatgttgcaaagaagctgggagagatgtggaataacactgctgcagatgac
aagcagccttatgaaaagaaggctgcaaagctgaaggaaaaatacgaaaaggatattgct
gcataccgagctaaaggaaagcctgatgcagcgaaaaagggcgtcgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaagaggaggag
gaagatgaagaagatgaagatgaagaagaa
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integrated database retrieval system