KEGG   Otolemur garnettii (small-eared galago): 100956411
Entry
100956411         CDS       T07855                                 
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
oga  Otolemur garnettii (small-eared galago)
Pathway
oga03410  Base excision repair
oga04140  Autophagy - animal
oga04217  Necroptosis
oga04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:oga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100956411 (HMGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100956411 (HMGB1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    100956411 (HMGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oga03036]
    100956411 (HMGB1)
   03400 DNA repair and recombination proteins [BR:oga03400]
    100956411 (HMGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oga04147]
    100956411 (HMGB1)
Chromosome and associated proteins [BR:oga03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    100956411 (HMGB1)
DNA repair and recombination proteins [BR:oga03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     100956411 (HMGB1)
   MMR (mismatch excision repair)
    Other MMR factors
     100956411 (HMGB1)
Exosome [BR:oga04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   100956411 (HMGB1)
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 HMG_box_5 NOA36
Other DBs
NCBI-GeneID: 100956411
NCBI-ProteinID: XP_012665454
Ensembl: ENSOGAG00000003205
UniProt: H0WMA9
LinkDB
Position
Unknown
AA seq 210 aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEDEEE
NT seq 630 nt   +upstreamnt  +downstreamnt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgtcgggaggagcacaagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagatatggcaaaggcggacaaggcccgttacgaaagagaaatgaaaacctatatccct
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gcctttttcttgttctgttctgagtatcgccccaaaatcaaaggagaacatcccggccta
tccattggtgatgttgcaaagaagctgggagagatgtggaataacactgctgcagatgac
aagcagccttatgaaaagaaggctgcaaagctgaaggaaaaatacgaaaaggatattgct
gcataccgagctaaaggaaagcctgatgcagcgaaaaagggcgtcgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaagaggaggag
gaagatgaagaagatgaagatgaagaagaa

DBGET integrated database retrieval system