Otolemur garnettii (small-eared galago): 100956717
Help
Entry
100956717 CDS
T07855
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100956717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oga03041
]
100956717
03009 Ribosome biogenesis [BR:
oga03009
]
100956717
Enzymes [BR:
oga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100956717
Spliceosome [BR:
oga03041
]
Complex A
U2 snRNP components
U2 related factors
100956717
Complex B
100956717
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
100956717
Ribosome biogenesis [BR:
oga03009
]
Eukaryotic type
90S particles
Helicases
100956717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_19
AAA_22
Glyco_hydro_98M
Flavi_DEAD
AAA_29
AAA_25
DUF3915
SRP54
nSTAND3
Motif
Other DBs
NCBI-GeneID:
100956717
NCBI-ProteinID:
XP_023372071
LinkDB
All DBs
Position
Unknown
AA seq
1077 aa
AA seq
DB search
MAESGSFPLLVQGSWGPDPPKNLRAELQMYFQSPKRSGGGECEVRQDPGSPSGFLVLFHP
EDVRQRVLERKNHELIWPGKGTFQLTLQLPTAPDKVHDVVEEKTLTEESPFKEDVKKPDV
SEEFNTKVSLKEGSKEMEDTSKECENIPSLVAFENLKANVTDMMSVLLVQLISGLSNDDF
DVEVIPDSDVVVVTFKTHIDIVKFVEECAQHRLTKQLQLSPRLLEVTKTICVENLPPGAD
EYSLQLFFKNPFHGGGSVAGVKCFPKESSALIEFFDSKARSKSAKMSELHRLDLGEDYPS
SKKHEGTDGKDRDCDQDHGDQSKDRDQERDREDREPEKEKENEKELQASTNAMLIHAGIP
PLKASHSAHSTHAAHSTHFAHSTHTENADHTSLPQGINPFTNLPHTPQYYDILKKRLQLP
VWEYKDRFTDILVRHQSFIVVGETGSGKTTQIPQWCVECMQSLPGPKRGVACTQPRRVSA
MSVAQRVADEMDVVLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGIII
LDEAHERTLATDILMGVLKKVVRQRSDLKVIVMSATLDAGKFQIYFNNCPLLTIPGRTHP
VEIFYSPEPERDYLEAAVQTVIQIHTCEEEEGDLLLFLTGQEEIDDVCKRIKCEVDDLGP
EVGDIKIIPLYSTLPPQQQQRVFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVID
PGFAKQNVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNT
CPEILRSDLGSVVLQLKKLGIDDLVHFDFIDPPSLETLVRGLELLNYLAALNDDGDLTEL
GSMMAEFPLDPQLAKTVIASCDYNCSNEVLSIAAMLSVPQCFVRPTEAKKAADEAKMRFA
HIDGDHLTLLNVYHAFKQNHESVQWCYNNFINYRSLMSADNVRQQLSRIMDRFNLPRRST
NFTNRDYYINIRKALVTGYFMQVAHLEQTGHYLTVKDNQVVQLHPSTVLHHKPEWVLCKE
FVQTTKTYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKHQSKEYSQY
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtccggctccttcccgctgctggtccaggggtcttggggccccgaccccccg
aagaacttgcgtgccgagttgcagatgtacttccagagcccaaagagatcgggcggcggg
gagtgtgaggtccggcaggacccggggagcccatccggcttcctggttctcttccacccg
gaggacgtccggcagagggttctggagagaaagaatcacgagttaatatggccaggaaaa
ggaactttccagttaactctccagttgcccacagccccagataaagtccatgatgttgta
gaagagaaaactttgactgaggaatccccgtttaaagaagatgtcaaaaaaccagatgtg
tcagaagaattcaatacaaaagtctccctcaaagaaggatcaaaagaaatggaagataca
tcaaaagaatgtgaaaatattccctctttggtggcatttgaaaatctcaaggcaaatgtg
actgacatgatgtcagtcttgttggtgcagctcataagtggcctgtccaatgatgacttt
gatgtggaagtaataccagattctgatgtcgttgtagttacctttaaaacacatatagat
attgttaaatttgttgaggaatgtgcccagcatcgcttaactaaacaactccagctttct
ccaagacttctggaagtgacaaaaacaatctgtgttgaaaacctgcctcctggtgctgat
gaatacagtttacaacttttctttaaaaatcctttccatggagggggaagcgttgccggt
gttaaatgttttcccaaggagagttcagctctaatagaattttttgacagtaaagcccgc
tccaagagtgcgaagatgtccgagctccaccggctagacctgggggaggattacccctcc
agcaagaagcatgaggggactgatgggaaggatcgagattgtgaccaggatcatggcgat
cagtctaaagatcgggaccaagaacgtgatagggaagatagagagccagagaaggaaaaa
gaaaatgagaaggaattgcaagcttctactaatgctatgcttatccatgctggaatacca
cctttaaaagcttcccattcagctcactcaacccatgcggcacattcaacacattttgct
cattcaacacacacagagaatgcagaccacacatcacttccacagggcattaatccattt
accaacttaccccatactcctcaatactacgatattctgaagaaacggcttcagctccct
gtttgggaatataaggatagatttacagatattcttgttagacatcaatccttcatagtt
gttggtgagactgggtctggtaaaacaacacagatcccacagtggtgtgtggagtgtatg
caatcattaccaggacccaaaagaggagttgcctgtacccaacccaggagagtgtctgca
atgagtgtggctcagagagttgctgatgaaatggatgtggtgttgggccaggaagttggt
tactccattcgatttgaggactgcagtagtgcaaaaaccatccttaagtatatgaccgat
ggcatgttacttcgtgaagctatgaatgatcccctcctggagcgttatggtataataatt
cttgatgaagctcatgaaaggacactggctacagatattcttatgggtgttctgaagaaa
gttgtaagacagagatcagatttaaaggttatagttatgagtgccactctagatgcagga
aaattccagatttactttaataactgtcctctcttaactattcctgggcgtacacatcct
gttgagatcttttacagtccagaaccagagagagattatcttgaagcagcagttcaaaca
gtgatccaaattcatacgtgtgaagaggaagagggagatcttctacttttcttaactggt
caagaggaaattgatgacgtctgtaagagaatcaagtgtgaagttgatgacttgggccct
gaagttggtgacattaaaatcattcccttgtactctacacttccacctcagcaacagcag
cgtgtctttgagcctccgcctccaaaaaaacagaatggagcaattggaagaaaggtagtt
gtgtcaactaacattgcagagacatctttgacaatagatggtgttgtgtttgtgattgat
cctggatttgcaaaacaaaacgtttataatcctcgcatcagggttgagtcccttttggtg
acagctattagtaaagcttcagctcaacaaagggctggtcgagctggacgtaccagacct
gggaaatgcttcagactgtacacagagaaagcttacaaaacagaaatgcaggataatacc
tgccctgagattttacgttctgatttaggatcagttgtgttacagttgaagaaacttggt
attgatgatttggtgcattttgattttatcgatcccccttctcttgaaactctggtgcga
ggcctggaacttttgaattatcttgctgctttaaatgatgatggagatcttactgaattg
ggatccatgatggcagagtttcctctagatccacagcttgctaaaacggttattgcaagt
tgtgactacaactgttctaatgaggtcctatctattgctgctatgttgtcagtcccacag
tgttttgttcgccccacggaggccaagaaagctgcagatgaagccaagatgagatttgcc
cacatagatggagatcatctgacactgctgaatgtctaccatgcttttaaacaaaatcat
gaatcagttcagtggtgttataacaacttcattaactacaggtccctgatgtctgcagac
aatgtacgccagcagctatctcgaattatggacagattcaatttgccacgtcgaagtacc
aactttacaaacagggactattatattaatataagaaaagctttggttactgggtacttt
atgcaggtggcgcatttagagcaaacagggcattacttaactgtgaaagataaccaggtg
gttcagttgcatccctctactgtccttcaccacaagcctgaatgggtgctttgtaaagag
tttgtgcagacaacgaagacttacatccggacttgtacagatatcaagccggagtggttg
gtgaaaattgcccctcagtattatgacatgagcaatttcccacagtgtgaagcaaagaga
cagctggaccgcatcattgccaaacatcaatccaaggaatattcacagtactga
DBGET
integrated database retrieval system
