Otolemur garnettii (small-eared galago): 100957004
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Entry
100957004 CDS
T07855
Symbol
COL17A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XVII) chain
KO
K07603
collagen type XVII alpha
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga04382
Cornified envelope formation
oga04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100957004 (COL17A1)
09158 Development and regeneration
04382 Cornified envelope formation
100957004 (COL17A1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
DUF2868
Pox_A_type_inc
Motif
Other DBs
NCBI-GeneID:
100957004
NCBI-ProteinID:
XP_012659097
Ensembl:
ENSOGAG00000017124
LinkDB
All DBs
Position
Unknown
AA seq
1491 aa
AA seq
DB search
MDVTKKNKRDGTEVTERIITETVTTRLTSLPPKGGTSNGYTKTGSLGGGSRLEKQSLTHG
SSGYINSGGSTRGNASTSSYRRAHSPASTLPNSPGSTFERKTHITRHGTYEGSSSGNSSP
EYPRKEFASSSTRGRSQTRESEIRVRLQSASPSTRWTELDDVKRLLKGSRSASVSPTRNS
SNTLPIPKKGTVETKTVTETVSSQSVLGTYDTTILDANLPSHVWSSTLPAGSSMGTYHNN
MTSQSSSLLNTNAYSTGSVFGVPNNMASCSPTLHPGLSTSSSVFGMQNNLAPSSSALSHG
TATMSTATYGVKKNMPQSPAASNTSNNAGMSTSAACSTSVQSDDFLHKDCKFLILEKDNM
PAKKEMELLIMSKDSGKVFTASPASIAATSFSEDTLKKEKQAAYNADSHLKAEANGDLKT
VSTKGKDTSTEIHGYGHHGGGGGGGAVGGGPWAAPTWCPCGSCCSWWKWLLGLLLTWLLL
LGLLFGLIALADEVRRLKARVEDLERARGGALSFEEKMERSSKDRLQAAAPDPGLLGKAG
PDAYSQEALWLFVRNKLMAEQENGNLRGSPGPKGDMGSQGPKGDRGLPGIPGIPGPLGHP
GPEGPKGQKGSVGDPGMEGPMGQRGREGPMGPRGEPGPPGFGEKGERGDSGEPGPQGPPG
VPGSVGPKGSSGSPGPQGPPGSVGLQGLRGEVGPPGIKGDKGPMGPPGPKGDQGEKGPRG
LTGEPGMRGLPGAVGEPGAKGAMGPAGPDGHQGPRGEQGLTGMPGIRGPPGPSGDPGKPG
LTGPQGPQGLPGTPGRPGTKGEPGAPGKIVTSEGSSTLTVPGPPGPPGAMGPPGPPGAPG
PAGPAGLPGQQEGLDLRGPPGPPGPRGPPGPSIPGPLDDGQAPXEGLPGPPGPPGSFLSN
SETFFSGPPGPPGPPGPKGDQGPPGPRGHQGEQGPPGFSSSGSSSLGLNLQGPPGPPGPQ
GPKGDKGDPGIPGAPGIPSGPSRGGSSSSTYLQGPPGPPGPPGPPGSISSSGREIQQYIS
EYMESDRIRSYLSRVQGPPGPPGPPGPVTTITGETFNYSELASQVMSYLQTSGYSVSLSS
SSISSEDILAVLQREDVNQYLQQLIGPRGPSGPSGAIGDGSLQSLDYAELSSRILSYMSS
SGISIGLPGPPGPPGLPGTSYEELLSLLQGSEFRGIVGPPGPPGPPGIPGNVWSSISMED
LSSYLHTAGLSSIPGPPGPPGPPGPRGPPGVSGALATYAADNSDSFRSELISYLTSPDVR
SFIVGPPGPPGPQGPPGDSRLLSMDDSYRRASSSSSHSLSSRRGSSYSSSASTGGAGAGT
LGEGVAFGAADPYSTGLGRDYGAAAVGGMYGGDNGPFTDGFAGHLDYNELAVRVSESLQR
QGLLQGMAYTVQGPPGRPGPQGPPGISKVFSAYSNVTEDLMDFFRTYGAIPGPPGQKGEV
GTPGPKGDRGPVGPPGHPGSPGPRGHKGEKGDKGDQVYVGRRRRRSIATKP
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaccaagaaaaacaaacgagatggcaccgaagtcactgaaagaattatcact
gaaacagtaactacaagacttacatccttaccaccaaaaggggggaccagcaatggctat
actaaaacaggctctcttggtggagggagccggctggagaagcaaagcctgacccatggc
agcagcggctacatcaactcaggtgggagcacccggggcaacgcctccacctccagttac
aggagggctcattctcccgcctccactctgcccaactcaccaggctcaacctttgagagg
aaaactcacatcacccgccatggaacatacgaagggagctccagtggcaactcttctccg
gagtaccctcggaaggaattcgcatcttcttcaacgagagggcggagccaaacacgagag
agcgaaattcgagtgcggctgcagagtgcgtccccatccaccaggtggacagaattggat
gatgttaagcgtttgctcaaggggagtcgatcagccagtgtgagccccactcggaattcc
tccaacacactccccatccccaagaaaggcaccgtggagaccaaaacagtaacagagaca
gtgagttcccagtcagtgttgggtacctatgacacaacgatcctggacgccaaccttcca
tcccatgtgtggtcctccaccctgcctgcgggatcctccatggggacctatcacaacaac
atgacatcccagagctcgtccctcctcaacaccaatgcctactctacaggctcagttttt
ggagttcccaataacatggcatcctgttcgcccaccctgcaccctggactcagcaccagc
tcttcagtatttggcatgcagaacaatctggcccccagctcatctgccctgtcccatggc
acagccaccatgtccacagctacctatggtgtgaaaaaaaacatgccccagagccctgct
gcctcgaacacctccaacaacgctggcatgtccacctctgctgcctgcagcacaagtgtc
cagagtgatgacttcttgcacaaggactgtaagttcctgatcttggagaaggacaatatg
cctgccaagaaggagatggagctgctgatcatgagcaaggacagtgggaaggtcttcacg
gcctcccctgccagcatcgctgcaacttctttttcagaagacaccctcaaaaaagaaaag
caagctgcctacaatgctgactcccacctaaaagctgaagctaatggagacctgaagacc
gtgtccaccaaaggcaaggacacctctacagaaattcacggttacggccaccatggcggc
ggaggtggtggtggcgccgtaggtgggggcccgtgggcggcacctacttggtgcccctgc
ggctcctgctgcagctggtggaagtggctgctgggcctgctgctcacctggctgctgctg
ctggggctgctcttcggcctcatcgctctggcggacgaggtgcggaggctgaaggcccgc
gtggaggacctggagcgggcccgaggcggcgcgctgtccttcgaggagaagatggagcgc
agcagcaaggaccgcctgcaggcggcggcgcccgaccccgggctcctgggcaaagccggg
ccggacgcctacagccaggaggcgctctggctgttcgtgcggaacaagctcatggcggag
caggagaacggaaatctccgaggaagccctggccctaaaggtgacatgggaagtcaaggc
cctaaaggagatcgagggctccctgggatcccaggtatccctgggcccttgggccaccca
ggtccagaaggaccaaaaggacaaaaaggcagtgtgggagatcccggcatggaaggaccc
atgggtcagagagggcgagaaggccccatgggacctcgtggtgaaccaggacctcctggg
tttggagagaaaggagagagaggagattctggagagccaggtcctcagggcccacctggt
gtcccaggttctgtgggtcccaaaggttccagtggctctcctggcccccagggtccccca
ggttctgtaggtctccaagggctccgaggtgaagtgggaccccctggtatcaaaggtgac
aaaggaccaatgggaccaccaggacccaaaggtgaccagggagagaaaggaccccgaggc
ctcacaggagagcccggtatgagaggtctgcctggtgctgtgggagagcccggagctaaa
ggagcaatgggtcctgcaggccctgatggacaccaaggcccaagaggtgaacaaggtctc
actgggatgcctggaatccgtggcccaccgggaccatctggagacccaggaaagccaggt
ctcacgggaccccagggacctcagggacttcctggtactccaggccgaccagggactaaa
ggtgaaccgggagctccaggcaagatcgtaacttcagaggggtcatcgacgctcactgtc
ccaggccccccagggcctccaggagccatgggacctccaggacctccaggtgctccaggc
cctgctggcccagctggtctcccaggacagcaagaaggtcttgatttacgaggccctcca
gggccacctgggccacgtgggccaccgggaccttctattccaggccctctggatgatggc
caggctccctgagaaggcttgccaggcccaccaggccccccaggatctttcctgtcgaac
tcagaaaccttcttctctggccccccaggcccacctggccccccaggccccaagggtgac
caaggtcccccaggcccccgaggacaccaaggcgagcagggccccccagggttctcaagc
tcagggtccagttctcttggactcaaccttcagggaccaccaggcccacctggcccccag
ggccccaaaggagacaaaggtgatcctggcatcccaggagctcctggcattcctagtggt
ccttctcgaggggggtcatcgagctccacatacctgcagggcccaccaggtcccccagga
cccccagggcctccaggctccatcagcagctctggccgggagattcagcagtacatctct
gagtacatggagagtgaccgtatcagatcttacctgtctagagttcagggtcctccgggt
ccacctggccccccggggcctgtcaccaccatcacaggagagaccttcaactactcagag
ctggcgagccaagtcatgagctacttacagacttcggggtacagtgtcagcctgtcctcc
agctccatctcttctgaagacattctggctgtgctgcagcgggaagatgtgaaccaatac
ctacagcaactgattggtcctcggggtccctcggggccatcaggagccattggggatggg
tctctccagtctttggactatgcagagctgagcagccgcattctcagctacatgtcaagt
tctgggatcagcattgggctccctggtccccctggcccccctggcctgccaggaacatct
tatgaggagctcctctccttgcttcaagggtctgaattcagaggcatcgttggaccccca
ggacccccagggccaccagggatcccaggcaatgtgtggtccagcatcagcatggaggac
ctctcatcttacttgcatactgctggcttgtcatccatcccaggccctccaggtccacct
ggtcccccaggtcctcgagggcccccgggtgtctctggagctttggcgacctatgcggct
gacaatagcgacagcttccggagtgagctgatcagctacctcacaagtcctgacgtgcgc
agcttcatagttggccccccgggtcctcccgggccacagggaccacccggggacagccgc
ctcctgtccatggatgactcctaccgtcgggcaagcagctcctcctcacacagcttgtcc
agcagacggggcagctcctacagctcctctgcgagtacaggaggggctggtgcaggcacc
ctgggtgaaggggtggcctttggtgcagccgacccctatagcaccggcctgggcagagac
tatggggcagcagcagtagggggcatgtacggtggtgacaatggacccttcacggatggc
tttgctggacatctggattacaatgagttggctgtccgggtgtcggagagcttgcagcgc
cagggcctgctacaagggatggcctacactgtccagggcccacctggccggcctgggccc
cagggaccacctggcatcagcaaggtcttctctgcctacagcaacgtgactgaggacctc
atggacttcttccgaacttatggagccattccaggaccccctgggcagaagggagaggtg
ggcaccccaggacctaaaggtgacagaggccctgtgggaccaccaggtcatcctgggtca
cctggccctcgagggcacaagggagaaaaaggagacaaaggtgaccaagtctacgttggg
cggagaaggagaagaagtatcgccaccaagccatga
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integrated database retrieval system
