Otolemur garnettii (small-eared galago): 100957320
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Entry
100957320 CDS
T07855
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga01524
Platinum drug resistance
oga03430
Mismatch repair
oga05200
Pathways in cancer
oga05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100957320 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100957320 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
100957320 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
100957320 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oga03400
]
100957320 (MSH2)
DNA repair and recombination proteins [BR:
oga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
100957320 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
AAA_27
Motif
Other DBs
NCBI-GeneID:
100957320
NCBI-ProteinID:
XP_023367831
Ensembl:
ENSOGAG00000015506
LinkDB
All DBs
Position
Unknown
AA seq
896 aa
AA seq
DB search
MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT
QGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGVKISTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGEMGKLRQVIQRGGILITERKKADFSTKDIYQD
LNRLLKGKKGEQMNSTVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDMAAVRALNLFQGSVEDTSGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
LEKYEENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLEPGKQIKLDSSAQ
FGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIV
KEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHASNGAPVPYVRPVILEKGRRRIILKASR
HPCVEVQDEVAFIPNDIYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCE
SAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATQDSLIIIDELGRGTSTYD
GFGLAWAISDYIATKIGAFCMFATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVK
KGVCDQSFGIHVAELANFPRHVIECAKQKALELEEFQNIGGSQGYDEMEPAAKKCYLERE
QGEKIIQEFLSKVKQVPFTEMSEENITIKLKQLKAEVIAKNNSFVNEIISRTKVTT
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggagacgctgcagctggagagcgcggccgaggtcggcttcgtg
cgcttcttccagggcatgccggagaaaccaaccaccacggtgcgcctctttgaccgaggc
gacttctacacagctcacggcgaggacgcgctgctggccgcccgggaggtgttcaagacc
cagggcgtgatcaagtacatggggcccgcaggagcaaagaatctacagagtgttgtgctt
agtaaaatgaattttgaatcttttgtgaaagatctccttctggttcgccagtacagagtt
gaagtttataagaatagagctggaaataaggcatccaaggagaatgactggtatttggca
tttaaggcttctcccggcaatctatctcaatttgaagacattctctttggtaacaatgat
atgtctgcttccattggtgttgtgggtgttaaaatatccacagtcgatggccagaggcag
gttggagttgggtatgttgattctatacagaggaagctaggactgtgtgagttccctgac
aacgatcagttctccaatcttgaggcactcctgattcagattggaccaaaggaatgtgtt
ttaccaggaggagagacagctggagagatggggaaactaagacaggttattcagagggga
ggaattctgataacagaaagaaagaaagctgacttttccacaaaggacatttatcaggac
ctcaaccggttgttgaaaggtaaaaaaggagaacagatgaatagtactgttttgcctgaa
atggagaatcaggttgcagtttcatcattgtctgcagtaatcaagtttttagaactctta
tctgatgattcaaattttggacagtttgaacttactacttttgacttcagccagtacatg
aaattggatatggcagcagtcagagcccttaaccttttccagggttctgttgaagatacc
agtggctctcagtctctggctgcattgctgaataaatgcaaaacccctcaaggacaaaga
ctagttaaccagtggatcaagcagcctctcatggataagaacagaatagaagagagatta
aatttagtggaagcattcgtggaagatgcagagttgaggcagagtttacaagaagattta
cttcgtcgcttcccagatcttaaccgacttgctaagaaatttcaaagacaagctgcaaac
ttacaagattgttaccgactctatcagggtataaatcaactccctaatgttatacaggct
ctggaaaaatatgaagaaaaccatgaattccttgttaaaccttcatttgatcctaatctg
agtgaattaagagaaataatgaatgacttggaaaagaagatgcagtcaacattaataagt
gctgccagagatcttggcttggaacctggcaaacagattaaactggattccagtgcgcag
tttggatattattttcgtgtaacctgtaaggaagaaaaagtccttcgtaacaataaaaac
tttagtacggtagacatccagaagaacggtgttaaatttaccaacagtaaattgacttct
ctcaacgaagaatataccaaaaataaaactgagtatgaagaagcccaggatgccatcgtt
aaagaaattgtcaatatttcctcaggctatgtagaaccaatgcaaacgctcaatgatgtt
ttagcgcagctagatgctgttgtcagctttgctcatgcatcaaatggagcacctgttccc
tatgtacgaccagtcattttggagaaaggacggaggagaattatattgaaagcatccaga
catccttgcgttgaggttcaagatgaagttgcgtttattcctaatgatatatacttcgaa
aaagataaacagatgttccacatcattactggccccaatatgggaggtaaatcaacatat
attcgccagacgggggtgatagtactcatggctcaaattgggtgttttgtgccgtgcgag
tcagcagaagtgtcaattgtggactgcatcttggcccgggtaggggctggtgacagtcaa
ttgaaaggagtctctacattcatggctgaaatgttggaaactgcttctatcctcaggtct
gcaacccaagattcattaataatcatagatgaattgggaagaggaacttctacctatgat
ggatttgggttagcatgggctatatcggattacattgcaacaaagattggtgctttttgc
atgtttgcaacccattttcatgaacttactgccttggccaatcagataccaactgttaat
aatctacatgtcacagcattaaccactgaagagaccttaactatgctttatcaggtaaag
aaaggtgtctgtgatcagagttttgggattcatgttgcagagcttgctaatttccctaga
catgtaatagaatgtgctaaacaaaaagccctggaacttgaggagtttcagaatattgga
ggatcacaaggatatgatgaaatggaaccagcagcaaagaagtgctatttggaaagagag
caaggtgaaaaaattattcaggagtttctgtccaaggtgaaacaagtgccctttactgaa
atgtcggaagaaaacatcactataaagttaaaacagctgaaagctgaggtgatagcaaag
aataatagttttgtaaatgaaatcatttcaagaaccaaggttactacctga
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