KEGG   Otolemur garnettii (small-eared galago): 100957704
Entry
100957704         CDS       T07855                                 
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
oga  Otolemur garnettii (small-eared galago)
Pathway
oga03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oga00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100957704 (PRPF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oga03041]
    100957704 (PRPF4)
Spliceosome [BR:oga03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    100957704 (PRPF4)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st PRP4 Beta-prop_EML ANAPC4_WD40 NBCH_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_DCAF4 WD_LRWD1 WD40_like Ge1_WD40 Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 100957704
NCBI-ProteinID: XP_023366332
Ensembl: ENSOGAG00000007802
LinkDB
Position
Unknown
AA seq 491 aa
MASSRATSTAVKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI
ANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSP
NSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTISLDKKDVNLASCAA
DGSVKLWSLDSYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRV
WDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCIYTIPAHQNL
VTGVRFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCS
YDRTFKLWMAE
NT seq 1476 nt   +upstreamnt  +downstreamnt
atggcttcctcacgggccacttccacggcagttaaaactaaagcacctgacgacttagtt
gctcctgttgtgaagaaaccacacatctattatggaagtttggaagagaaggagagggag
cgtctggccaaaggagagtctgggattttgggaaaagaaggacttaaagcaggaatcgaa
gcaggaaatattaatataacttcaggagaagtgtttgaaattgaggagcacatcagtgag
cgacaggcagaagtattggctgaatttgaaagaaggaagagagcccggcaaatcaatgtt
tccacagatgactctgaggtcaaggcttgccttagagccttaggggaacccatcacactt
tttggagagggccctgctgaaagaagagaaaggttaagaaatatcctctcagtagttggt
actgatgccttaaaaaagactaagaaggatgatgagaaatctaagaagtccaaagaagag
tatcagcaaacctggtaccatgaaggaccgaacagcttgaaagtggctagactatggata
gctaattactcactgcccagggcaatgaagcgcttagaagaggctcgtctccataaagaa
attcctgagacaactagaacctcccagatgcaggagctgcataaatctctacggtctttg
aataatttctgcagtcagattggggatgatcggcctatctcttactgtcactttagtcct
aattccaagatgttggccacagcttgttggagtgggctttgtaagctctggtctgttcct
gattgcaacctccttcacactcttcgaggccataacacaaatgtaggagcaattgtattc
catcccaaatccactatctccttggataaaaaagatgtcaacctggcttcttgcgctgct
gatggctctgtgaagctttggagtcttgatagctatgaccgttcatggcgcttatgggat
ttggaggctcaagaagagattctgcatcaggaaggccacagcatgggtgtgtatgacatc
gccttccatcaggacggctctttggctggcactgggggcctggatgcatttggtcgagtt
tgggacctacgcacgggacgttgtatcatgttcctggaaggccatctgaaagaaatctat
ggaataaatttctcccccaatggctaccacattgcaactggcagtggtgacaacacgtgc
aaagtgtgggaccttcgacagcgacgttgcatctataccatccctgcccatcagaactta
gtgaccggtgtcaggtttgagcccatccatgggaacttcttgctcactggtgcctatgat
aatacagccaagatctggacccatccaggctggtctccactgaagactctggctggccac
gaaggcaaagtgatgggcctagacatttcttctgatgggcagctcatagccacttgctcg
tatgacaggacctttaagctctggatggctgaatag

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