Otolemur garnettii (small-eared galago): 100958074
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Entry
100958074 CDS
T07855
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4 isoform X1
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100958074 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oga04121
]
100958074 (SLX4)
03400 DNA repair and recombination proteins [BR:
oga03400
]
100958074 (SLX4)
Ubiquitin system [BR:
oga04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
100958074 (SLX4)
DNA repair and recombination proteins [BR:
oga03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100958074 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
Motif
Other DBs
NCBI-GeneID:
100958074
NCBI-ProteinID:
XP_023369616
Ensembl:
ENSOGAG00000015911
LinkDB
All DBs
Position
Unknown
AA seq
1644 aa
AA seq
DB search
MLAPAPNQPVLWERAQTTQTESTPNSDSQPPPSRLTTVVPSPSKPRTAELVLQRMQQFKR
ADPERLKHASEECSLEVALEENAPKGPLEETVLGNGYGSGLPATDSDAAVALALQQEFAQ
GGASAHSDSLEEKGLFFCQICQKDLSAMNVARREQHVNRCLDEAEKALRPSIPQIPECPI
CGKPFLTLKSRISHLKQCAVKMEVGPQLLLQAVRLQTAQPEGAGSPPASSFSNHVGGLKR
KVATNKKETQKKQKVVEAPSEDLLVAMALSRSEMEQCPAVAELKLESAFSERVRPGAEKK
SHKKKTLVPLPRLLVQDSETTGRQIEDQVALLLSEEAEFSSTPPLPASRILKEELEKGGW
CLPPPEGKQNFLWEGSTLTGAWAVESFYTANLVPPLMPQGPVMGLPLPAEQSELGMGRPP
ALHSNVPEDPSPSASQREHQALQDLVDLAREGLSASPWPGSGGLAKSGSSAELDLVPNGL
PLTGFVLPPKEKHLERGGHASLSLGLLVADFGAMVNNSHLSDVQFQTDSGEMLHAHKFVL
YARCPLLSQYVNNEGFSAVEEGILTQRVLLSDVSTEGAYAFLHYLYTADTGLPPHLTPEL
RSLALRFGMSELAHLCEQVPTMTDSEGEQWEKEDENCESRAENFQELLRSVWVDEEEEGE
MLKSNSHKEDREKVNEAEMEEIYEFAATQRKLLQGSRIPDDNEDTDHHKEDRPPSGHVLA
SVQVNEQWEKAENMESSEPGRDEDPTNGENMREQVLWPLQSHPSDREGGAEIHEQEAPRK
AQGHSRSCSLSVSHSIPHLEDTCDQKQLFSSTLGEFSELSQITRDSKEQSGSVRERGVEI
LHGPAAQQVPLAYLRGYVLQPPQGGSPSQSPLHPHHTSGLSPSIPQLHGGLSQLATPNSL
SPAGLSKLKRDSNMLTLFKEPGHQKGKECSSVLEPKSKGVLISPEKSLSIDLTQTKPDHL
SPRSQNSLSSVNKEDEIILLLDSDEELELEQTKIKSVSGDLPEERKILDISLKSSELFSV
IDVDTDQEHSQSPPRREAELQQKKEEGQLEKRGSVGSRGTPWLFCDRESSPDEDNTMDTS
WLVPATPLASRSCNSSSQTQITSLRTRIAVDEMTRHTAAASSENREVKEATQELSVIMPQ
TLSSCRVPSTLGTSHSRRPVHRSFPCPHLRRHKVSPHVHFTEQLPRYSQPGLRLPKQATA
SEVVEVKDSEDEQEMAFYQPHSSPLLDSDPLVATDDCCWPVEPLSPIPIDHVNLERTGPL
STSSPSNRVRDALDRSDSHSPGLLCTTPIRGSCATQRRSLDKSSRADSPGSSRLSFLNST
LWADWDGEEQKSPETLPLAKTPSVDPAQKSKESEGANRKKNLPPKVPITPMPRYSIMETP
VLKKELDRFGVRPLPKRQMVLKLKEIFHYTHQTLESNSEDEIQSSQVPLEVPPRQTHTFE
THKSSRETHKPSRETHKPSREASLGPVPQRSKQPAKTKGTQCRKQQPSGKQQPKSPATES
LPQPGGDIQLPASQESVTTSVDGSDSSFSSQSSSSGEFGAAFESASEDEEREEGLSASQA
ADTEEAVRRFIRSRPALYRKVLLYQPFELGELQAELKQNGICMATGKLLDFLDAHCITFT
TAAARKKLQGKRRHPVGKKKGERN
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctccggctccaaaccagcctgtactctgggaaagagcacagaccacccagaca
gagagcactcccaacagtgactcccagccacctccttcccgtttgacgacagttgtgcca
agtccctccaaacctcgcacagcagagctggtcctacagcgaatgcagcagttcaagaga
gcagatcctgagcgtttgaaacatgcttcagaagaatgctcccttgaagtggcattggaa
gaaaatgccccaaagggccctctagaggagacagtgttggggaatggatatgggtctggg
ctcccggccacagacagcgatgctgcagtggccttggccctgcagcaagagtttgcacag
ggaggagcatctgcacacagtgatagcctggaggaaaaggggttgttcttctgccaaatc
tgtcagaaggacctctcagccatgaacgtggcccggagagagcagcatgtgaacaggtgc
ttggatgaggctgaaaaggcactgagaccttccattcctcagatccctgaatgcccgatt
tgtggcaaaccatttctcaccttaaagagcagaatcagtcacttgaaacaatgtgcagtg
aagatggaagttggcccccagctcttgctgcaggctgtgcgattgcagacagctcagcct
gagggggccggcagtccaccagcatctagctttagcaatcacgtgggaggtttgaaacgg
aaagtagccactaacaagaaggagacacagaagaagcagaaggttgtcgaggcaccctcc
gaggacctgctggtggccatggcgctgtcccgatctgagatggagcagtgtccagctgtg
gcagaactcaaactggaaagtgctttttctgagagagtaaggccaggagcagagaagaaa
agtcacaagaagaaaaccctggttccccttcccaggttgttggtccaggactctgagacc
acaggcaggcagatagaagaccaagtggccctgctcctttctgaggaagcagaattttcc
agcacaccaccacttcctgccagcaggattttaaaggaagagttggaaaagggaggctgg
tgtcttccaccacctgaaggaaagcagaactttctgtgggagggcagcaccctgaccgga
gcctgggctgtggagtccttctacacagccaaccttgtccctcccctcatgccccagggg
cctgtcatgggcctccctctgccagctgagcagtcagagctgggtatgggaagaccacct
gccctacacagcaatgtccctgaggatccatcaccatcagccagccagagggaacaccag
gccctgcaggacctggtggatctggcaagggaggggctgagtgccagcccatggcctggc
agtggggggctagccaagtctggaagcagtgcagagttggacttggtgcctaatggtctt
ccactgactgggtttgtcctgccacccaaggaaaagcatctggagaggggcggccatgct
tcgctctcccttgggttactggttgctgactttggtgccatggtcaataattcgcacctg
agtgatgtccagttccagacagacagtggggagatgcttcatgcccacaagtttgtgctt
tatgcccgatgtccacttctcagtcagtatgtgaacaatgaaggcttctctgctgtagaa
gaggggattctgacccagcgcgtcctattaagcgacgtgagcaccgagggtgcctatgca
ttcctgcactatctctatactgcagacactggccttcctccccacctgactcctgagctg
aggtccctggccctcaggtttggcatgagtgagcttgctcacctgtgtgaacaagtgccc
accatgacagattcagagggcgaacaatgggagaaggaggatgagaattgtgaaagcagg
gcagagaatttccaagaactcttgaggtcagtgtgggtagatgaagaggaggaaggagag
atgttgaaatctaacagccacaaagaagacagagaaaaggtaaatgaagcagaaatggaa
gaaatttatgaatttgcagctactcagcgaaagctgctccaggggtcaagaataccagat
gataatgaggacactgaccaccataaggaagacagaccaccttctgggcatgtcctagca
agtgtccaggttaatgaacagtgggaaaaggcagagaacatggagtcttctgagccagga
agagatgaggacccaaccaatggggaaaatatgcgagagcaagttctctggccactccaa
agtcacccttcagacagggaggggggtgcagagatccatgagcaagaggcacccaggaag
gcccagggtcattccaggtcctgcagtctttctgtgagccactccattccacacttggag
gatacctgtgatcagaagcagcttttttcgtctactctaggagaattctctgagttgtcc
cagataacacgtgattccaaggaacagagtggctctgtcagggagaggggcgtggagatt
cttcatggccctgctgcccagcaggtgcccctggcatacttgcgtggctacgtgttgcag
ccaccccagggtgggagtcccagccagtcccctcttcaccctcatcacacaagtgggttg
tccccatcaataccgcagttgcatggtggtctctcccagctggccaccccaaactcactg
tctccagctgggctgtcaaagctgaaaagggacagtaatatgcttacattatttaaagag
ccaggccaccagaaaggcaaagaatgtagttctgtactggaacccaaaagtaagggggtc
ctgatttccccagaaaagtctctgtccattgacctaacccaaacaaaacctgatcatctg
agtcccagatctcagaattctctatccagtgtgaacaaagaagatgagattatccttttg
ttggattcagatgaagagctggagctagaacaaacgaaaataaagtcagtttctggtgat
cttccagaagaaaggaaaattctagacattagtctcaagtcctctgagttgttttctgtc
attgatgttgatacagatcaggaacattcccaaagcccaccaagaagagaagctgagcta
cagcagaaaaaggaggaggggcagttggagaagaggggctctgtgggcagcagagggacc
ccctggctgttctgtgaccgtgagagcagccctgacgaggataacactatggacacctcc
tggctggtacctgccacccctctggccagcagaagctgcaactcttcatcccagactcag
atcaccagcctcaggaccaggatagcagtggatgagatgactcggcacacggctgcagcc
tcatcagaaaatagggaagtgaaggaagctacacaggaactgtcagtgatcatgccccag
acactgtcatcatgccgtgtccccagcactctaggaacttctcacagcagaaggccagtc
cacagaagcttcccttgtccccacctcaggcgccataaggtctctcctcatgtccatttc
accgagcagttaccgagatactcacagcctgggctgaggcttccaaagcaggcaactgct
agtgaagtggtggaggtcaaggacagtgaagatgagcaggagatggccttctaccagcca
cacagcagccccctactggatagtgaccccctagttgctactgatgactgctgctggcca
gtggagcccctttcaccaattccaatcgaccatgtaaaccttgagcgaactggccccctg
agcacgagtagtcccagtaatagggtgagggatgccttggacaggagtgacagccactca
cctgggctcctgtgtaccacccccatccgaggaagctgtgctacacaaagaagatctcta
gacaaatcctcccgggccgactccccaggcagcagcaggctgagctttttgaattcaact
ctgtgggctgactgggatggagaagagcagaagtctccagaaactcttcctctggccaag
acaccaagtgttgatccagctcagaagtctaaagagtcagaaggtgctaatcgaaagaag
aacttgccccccaaagtgcccataactccaatgccacggtattccattatggagacccca
gtgctgaagaaagaactggataggtttggagtccgccctctgcccaaacgccagatggtt
ctgaaactgaaggagatatttcactatactcaccagaccttggagtccaattctgaggat
gagatccagtcctcacaagtgccactggaggtgcctcccagacagacacacacctttgag
acccacaagtcttcaagggagacccacaagccttcaagggagacccacaagccttcaagg
gaggccagtctgggacccgtacctcaaaggtccaagcaacctgctaagaccaagggtacc
caatgtagaaagcagcagcccagtggaaagcagcagcccaagtcaccagccacggagtct
ctgccacaacctggtggtgacatccagctcccagcctcccaggaatctgtgaccacctct
gtggatggcagtgacagctcctttagctcacaaagttcttcctctggtgagtttggtgca
gcctttgagtctgcaagtgaagatgaggagcgcgaggaggggctcagtgcatcacaggcg
gcagacacagaagaggcagtgagacgcttcatccgctcccggcctgccttgtaccggaaa
gtgctgctataccagcccttcgagctaggggagctgcaggctgagctgaagcagaacggc
atctgcatggccacaggcaagctgctggacttcctggacgcccactgcattaccttcacc
actgctgcagcccgcaagaagctccaggggaagaggaggcatccggtgggcaagaagaaa
ggggagcggaattga
DBGET
integrated database retrieval system
