Otolemur garnettii (small-eared galago): 100958315
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Entry
100958315 CDS
T07855
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X2
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100958315 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oga03019
]
100958315 (CNOT6)
Enzymes [BR:
oga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
100958315 (CNOT6)
Messenger RNA biogenesis [BR:
oga03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100958315 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100958315 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
100958315
NCBI-ProteinID:
XP_003799211
Ensembl:
ENSOGAG00000032470
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MPKEKYEPPDPRRMYTIMSSEEAANGKKSHWAELEISGKVRSLSSSLWSLTHLTALHLSD
NSLSRIPSDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLF
QLQTLGLKGNPLTQDILNLYQEPDGTRRLLNYLLDNLSVSTEQPPPRSWIMLQEPDRTRP
TALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQ
YYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKIEKFTLVQKHTVEFNQL
AMANSKGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWD
PEYSDVKLVQTMMFLSEVKNIIDKASRNLKSSVVGEFGTIPLVLCADLNSLPDSGVVEYL
STGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYTNYTFD
FKGIIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLELLLPFL
PQVNGIHLPGRR
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaaaaatacgagccccctgaccctcggaggatgtacacaattatgtcttct
gaggaagcagcaaatggaaagaaatcacattgggcagagcttgaaataagtggaaaagta
agaagcttaagctcatctttatggtcactaactcacttgacagctttgcatttgagtgac
aattccctgtcccgcattccttcagacattgccaagcttcacaatttggtgtatctggac
ctgtcatctaataaaatccgtagtttaccggcagaactcggaaacatggtatcactcagg
gagctccatttaaataacaacctgttacgagttctaccttttgagctgggaaaactgttt
cagttgcagactttaggcctaaaaggaaatccacttacccaggatatattgaacctctat
caggaaccagatggaacaagaaggctactgaactatttgcttgataatttgtcagtttca
acagaacagccacctccaagatcttggattatgttacaagaaccagacagaacaaggcca
actgccttgttttctgtcatgtgctataatgttctttgtgataaatatgcgacccggcag
ttatacggctactgtccatcatgggcactaaattgggactacaggaaaaaggccattatt
caagaaatcttgagttgcaatgctgatatcataagtcttcaggaggttgaaacagaacag
tattacagtttttttctggtagaactgaaagaacgtggctataatggattctttagtcct
aagtcaagagctaggacaatgtcagaacaagaaagaaaacatgttgatggctgtgcaata
ttcttcaagatagagaaatttactttggttcagaaacacactgttgaatttaatcagcta
gcaatggcaaattcaaaagggtctgaagctatgctcaacagagtcatgacaaaagataac
attggagttgcagtactgctagaacttcgaaaggaattgattgaaatgtcatctggaaaa
ccacatcttggaacagaaaagcaactaattcttgtggctaatgctcacatgcattgggac
cctgagtactctgatgtgaagttggtacaaactatgatgttcctctcagaagtgaagaac
attattgataaagcttctcgaaacctcaaatccagtgtagtgggagaatttggaactatt
ccacttgtgttatgtgcagatcttaattctttgccagactctggtgttgtagaatatttg
agcactggtggagtagaaacaaatcataaagactttaaggaactgagatataatgaaagt
cttacaaattttagctgtaatgggaagaatggaacaaccaatggaaggatcactcatggt
ttcaagttaaagagtgcctatgagagtggcctgatgccttacacgaattacacatttgat
ttcaagggtataattgactacatcttctattctaaacctcagctgaacacattaggcatc
ctgggacctctggaccaccattggctggttgagaataacatcagcggctgcccacatcca
ctcatcccctctgaccacttctcactttttgcacaactggagctcttactgcctttcctg
ccccaagttaatggcattcaccttcctggcaggaggtag
DBGET
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