Otolemur garnettii (small-eared galago): 100959123
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Entry
100959123 CDS
T07855
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X3
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
oga
Otolemur garnettii (small-eared galago)
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oga04131
]
100959123 (LRBA)
Membrane trafficking [BR:
oga04131
]
Endosome - Lysosome transport
Others
Others
100959123 (LRBA)
Endosome - Golgi transport
100959123 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
100959123 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WDR55
SUKH_6
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
100959123
NCBI-ProteinID:
XP_012660874
LinkDB
All DBs
Position
Unknown
AA seq
2855 aa
AA seq
DB search
MASEDSRVPSPPPTGDDGGGGGKGEETSTEGSTLPLKPGLPIRGIRMKFAVLTGLVEVGE
VSNRDIVETVFNLLVGGQFDLEMNFIIQEGESIICMVDLLEKCDITCQAEVWSMFTAILK
KSIRNLQVCTEVGLVEKVLGKIEKVDNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGD
KGQWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRI
DPVNNINVDKDKPYLYCFRTSKGLGYSAHFVGGCLIITSIKSKGKGFQHCVKFDFKPQKW
YMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTNDTFDKCFLGSSETADANRVFCG
QMTAIYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAF
TYNARATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPL
FAQLDYRQYLSDETDLTICSTLLAFIMELLKNSIAMQEQMLACKGFLVIGYSLEKSSKSH
VSRAVLELCLAFSKYLSNLQNGMPLLKQLCDHILLNPAIWIHTPAKVQLMLYTYLSTEFI
GTVNIYNTIRRVGTVLLIMHTLKYYYWTVNPQDRSGITPKGLDGPRPNQKEILSLRAFLL
MFIKQLVMKDSGVKEDELQAILNYLLTMHEDDNLMDVLQLLVALMSEHPNSMIPAFDQRN
GLRVIYKLLASKSEGIRVQALKAMGYFLKHLAPKRKAEIMLGHGLFSLLAERLMLQTNLI
TMTTYNVLFEILIEQMGTQVVHKQHPDPDSSVKIQNPQILKVIATLLRNSLQCPESMEVR
RAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSDEQKITEMVYAIFRILLY
HAVKYEWGGWRVWVDTLSITHSKVTFEMHKENLANIFREQQGKVGEEIALCSSSPVQALS
AISRDVNVSVGSQQSDRQDSPVDPQFTRNSDENSSVEKTSSVECASSIELQICTTSNEEV
KTEQESQELLHEVTLEETLTNETANAGDSQISSDTIEAVTISSNSFKTTGKDTVSISEVT
ASVSTPSEEDALEMPELLEKSIVEEEEDDDYVELKVESSPAEEASLPTQLQDNFLSPAAS
EASKRPDLTGNDRKLIFQGEESVTKKQTDTETQDSKDSEILTMTASVSSNSLPETTVSQT
AIQSDIGQMLEEGKKTTNIASETKLINDCHTNVFEASATSEQKMAKLDVSSVATDTERLE
LKASTNMETSQPQRPVLEMSRQQEQPGQEIAPDAVNGQRRDSRSAVFRIPEFKWSQMHQR
LLTDLLFSIETDIQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLISQVMDNMVMACGGILP
LLSAATSATHELENIEPTQGLSIEASVTFLQRLISLVDVLIFASSLGFTEIEAEKNMSSG
GILRQCLRLVCAVAVRNCLECQQHSQLKNRGDKGSKTMQSLIPLGKSAAKSPVDIVTGGI
SPVRDLDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNE
RRSQSLKETGSENGNISLPENTPAEFSPLTPVSVEESESTSSARRRDSGIGDETATGLGS
NMDVTPQTAPASVSAGPDAISEVLCTLSLEVNKAQETQSDGGNELDPKATPSVSVSKNVN
VKDILRSLVNIPADGVTVDPALLPPACLGALGDLSVEPPVQFRSFDRSVVIATKKSAVLP
STLTTSIPTNAVSVVSSVDSVQASYVGGESPGSRTSSAKLPSVPTVGSVSQDSVSNMSIT
ERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSNSVVELVMLL
CSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILNRQRAEDIHRHAEF
ESLCAQYSADKREDEKMCDHLIRAAKYRDHVTATQLIQKVINILTDKHGAWGNSAVSRPR
EFWRLDYWEDDLRRRRRFVRNPLGSTHPEATLKTAVEHAADEDILAKGKQSIKSQALGNQ
NSENEILLEGDDDTLSSVDEKDLENLAGPVSLSTPAQLVAPSVVVKGTLSVTSSELYFEV
DEEDPNFKKVDPKILAYTEGLHGKWLFTEIRSIFSRRYLLQNTALEIFMANRVAVMFNFP
DPATVKKVVNYLPRVGIGTSFGLPQTRRISLASPRQLFKASNMTQRWQHREISNFEYLMF
LNTIAGRSYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPVGALNPKRAAFFAERF
ESWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGKFDHADRTFSSISRAWR
NCQRDTSDIKELIPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVELPPWAKTSEEFVRTNR
LALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLTYEGAVNLNSINDPVLREAVE
AQIRSFGQTPSQLLIEPHPPRGSAMQASPLMFTDQAQQDVIMVLKFPSNSPVTHVAANTQ
PGLVTPAVITVTANRLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPLIASNTGMHRRQITD
LLDQSIQVHSQCFVITSDNRYILICGFWDKSFRVYSTDTGKLVQVVFGHWDVVTCLTRSE
SYIGGNCYILSGSRDATLLLWYWNGKSSGIGDNPGSETTTPRAILTGHDYEITCAAVCAE
LGLVLSGSQEGPCLIHSMNGDLLRTLEGPENCLKPKLIQASREGHCVIFYENGLFCTFSV
NGKLQATMETNDNIRAIQLSRDGQYLLTGGDNGVVMVWHVADLKQLFAYPGCDAGIRAMA
LSYDQRCIISGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8568 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgaagacagtcgtgtcccttccccgccaccaacaggtgatgacgggggaggt
ggaggaaaaggagaagaaacctctaccgaagggagtacgttgcctctgaaaccagggctc
cccatcaggggcatcagaatgaaatttgccgtgttgacgggattggttgaggttggagaa
gtgtccaacagggatattgttgaaactgtgtttaacctgctggtaggaggacagtttgat
ttggaaatgaattttattatccaagaaggtgagagcatcatctgcatggtggacctcctg
gaaaaatgtgacattacatgccaggcagaagtctggagcatgtttacagccattctgaag
aaaagcatacgaaatcttcaagtctgtactgaagtaggcctcgtcgaaaaagtgcttggg
aaaattgaaaaagttgacaatatgatagcagatcttttagttgacatgttgggagtgctg
gctagctataatttgacagttcgagaactaaagcttttcttcagtaaacttcaaggagat
aaaggacaatggcctccacatgctgggaagttgctgtctgtgttaaagcacatgcctcag
aagtatggccctgatgcctttttcaattttccagggaagagtgctgcagctattgcatta
cctcctatagccaagtggccataccagaatggtttcacatttcatacctggcttagaatt
gatcctgtaaataatatcaatgtagataaggataaaccatatttgtattgtttcagaacc
agcaaaggtcttggttattctgctcattttgttggaggctgtttgattataacatcaata
aagtcaaaaggaaaaggctttcaacactgtgtgaaatttgatttcaagccacaaaagtgg
tatatggtaactatagtgcacatttataaccgatggaagaacagtgaacttcgatgttat
gtgaatggtgaacttgcttcctatggagagataacatggtttgtcaataccaatgatact
tttgacaaatgtttcctgggatcatcagagacagcagatgctaatagagtcttctgtggt
cagatgactgcaatttatcttttcagtgaagctcttaatgcagctcagatctttgctatt
tatcagttgggcctgggatacaagggcacatttaaattcaaagcagaaagcgaccttttc
cttgctgagcatcacaaacttttattgtatgatggcaaactctctagtgctattgccttc
acatacaatgcacgggctacagatgcccaactttgcttggaatcatctcctaaggacaac
ccttcaatttttgttcattcacctcatgcactcatgctccaggatgtgaaggcagttcta
acacattccattcaaagtgctatgcactcaattggaggagtacaagtgctattcccactt
tttgcgcagttggattataggcagtatctgtctgatgagactgatttgactatatgttca
accttgctagcttttatcatggaattgttgaagaactcaattgctatgcaggagcagatg
cttgcctgtaagggcttcttggtaatagggtatagtcttgaaaagtcttccaaatctcat
gtcagcagagcagtacttgaactttgccttgcattttcaaaatatctaagtaatctgcag
aatgggatgcccctactgaagcaattgtgtgatcacattcttctcaaccctgctatatgg
attcataccccagccaaggttcagttgatgctctatacttatctgtccacggaattcatt
ggtacagtcaacatatataatactattcggagagttggaacagtgcttctcatcatgcac
actctgaagtactactactggacagtgaatcctcaggatcgaagtggtatcactccaaaa
ggtttagatggaccacgacctaatcaaaaagaaatactttctctacgagcattcttattg
atgttcattaaacagttagtgatgaaggattctggagtaaaggaagatgagttacaggcc
attcttaattacctactgactatgcatgaggatgacaatctcatggatgtcctacagctg
cttgttgcattaatgtcagaacatcctaattctatgattcctgcatttgaccaaaggaat
gggttacgtgttatctacaaacttttggcatcgaaaagtgaaggaatccgagtacaagct
cttaaggcaatgggctattttttaaaacatctggccccaaagaggaaagctgaaatcatg
cttgggcatggattgttttcattgctagctgaaagactcatgctccagacaaatttaatc
acaatgaccacatataatgttctatttgagattcttatagaacaaatgggtactcaggtg
gtacataaacagcatccagatcctgattcttcagtaaagatacaaaaccctcagatacta
aaagtaattgcgaccttacttcgaaattctctccagtgcccagagagcatggaggttcgc
agagcctttctttctgacatgattaagctttttaataacagcagagaaaacaggcggagc
ttgctccagtgttctgtgtggcaagaatggatgctttctctctgctattttaatcctaag
aattcagatgagcaaaagataacagaaatggtgtatgccatattcagaatcctactttac
catgcagtcaaatatgagtggggtggctggcgtgtgtgggtagacaccttatcaatcaca
cattcaaaggtcacttttgaaatgcacaaagaaaatcttgccaatatatttagggaacaa
cagggaaaagttggtgaagaaatagcactgtgttcttcaagtccagttcaagcactctct
gctattagtagagatgttaatgtttcagtgggatctcagcagtctgataggcaggattct
cctgttgatcctcagttcaccaggaatagtgatgaaaactcaagtgttgagaagacaagt
tcagtagagtgtgcatccagcattgaacttcaaatttgtactacatctaatgaagaagtg
aaaactgagcaagaaagtcaagagttactccatgaagtcacattggaagaaacactgaca
aatgagacagcgaatgcaggtgattcacaaatatcttcagatacaatagaagcagtgacc
atttcttctaattcttttaaaacaactggcaaagatacagtttccatcagtgaagtaact
gcatctgtaagtaccccttcagaagaggatgctttagagatgccagagttattggagaaa
tctatagtggaggaagaagaagatgatgattatgtggaactgaaagtagaaagtagtcct
gctgaagaagccagtctacctacacaactccaagataattttttgtctccagctgcatct
gaagccagtaaaagaccggacctaactggtaatgatagaaaactaatatttcaaggggaa
gaatctgttactaaaaagcaaactgatactgaaactcaagattctaaagattctgagatc
ttgactatgacagcatcagtatcttcaaattccttaccagaaactactgtttcccaaaca
gctatacagtcagacattggtcagatgttggaggaaggaaagaaaacaacaaacatagct
agtgaaactaaattaattaatgattgtcatactaatgtctttgaggcttctgctacttct
gagcaaaagatggctaagttggatgtttccagtgttgctacagacactgagagattggaa
ttgaaggccagtacaaacatggaaacatctcagccccagaggcctgtgcttgagatgtca
aggcaacaggagcagccagggcaagaaatagcacctgatgcagttaatggacaacggagg
gattccagatctgctgtgtttcgtattcctgagttcaagtggtctcaaatgcatcagcgt
ttgctcactgatttattattttcaatagaaacagatatacagatgtggagaagccattca
acaaagacagttatggacttcgtgaatagcagtgataatgtcatctttgtacacaacaca
attcatctcatctctcaagtgatggacaatatggtcatggcttgtgggggtatactgcca
ttgctttcagctgctacatcggctacacatgagctggagaatattgaacctactcaaggc
ctttcaattgaagcctctgtgacatttttgcaaaggctaattagccttgtggatgtgctt
atatttgcaagttctcttggctttactgaaatcgaagctgaaaaaaatatgtcatctgga
ggaattttgcggcagtgtctcagattggtgtgtgcagtagcagtaaggaattgcttagag
tgtcaacagcattcacaactgaaaaataggggagataaaggatcaaaaacaatgcaaagc
cttattcccttggggaaatctgcagcaaagagtccagtggacattgtgactggtggtata
tctccagtaagagatcttgaccggcttctacaagacatggatattaatcggcttagggct
gttgttttcagagacatagaggatagcaagcaagctcaatttttagccttggcagttgta
tactttatctctgttcttatggtctccaagtacagagatattttggaaccccaaaatgag
cggcgtagccagtcattgaaagaaactggcagtgaaaatgggaatatatcactccctgaa
aacacaccagctgaattcagccctttaactccagtgtcagtggaagaatctgaaagcaca
tcatctgctcgaaggagggactcaggcattggggatgaaacagctactggtttaggaagt
aatatggatgtaactcctcagacagcacctgctagtgtcagtgcaggccctgatgccatc
agtgaggtactgtgtactctttctttagaagtcaataaagctcaggaaacccaaagtgat
ggaggaaatgaattggatcctaaagctacaccatcagtttcagtctcaaaaaatgtcaac
gttaaagatattcttcgaagcttggttaacataccagcagatggagtcacagtggatcct
gctcttctgccaccagcctgtcttggagctcttggtgatctttctgttgagccgcctgtg
caattcagatcttttgacagaagtgtcgtcattgcaacaaaaaaatcagcagtcttacct
tccacacttaccacaagtatacctaccaatgctgtcagtgtggtttcttcagtagattca
gttcaagcttcatatgtgggaggagaatcaccaggcagtagaacatctagtgcaaaattg
ccctcagttccaacagttggttcagtttcacaagactcagtttcaaatatgagcattaca
gagaggcttgagcatgctttggaaaaggcagctcctctgctgcgagagatttttgtggat
tttgcaccttttctttctcggacacttttgggtagccatggacaagaactgcttattgaa
ggaacaagtctggtttgcatgaagtctagtaactcagttgtggaattggttatgctactt
tgttctcaggagtggcagaattctattcagaagaatgctggccttgcttttattgaactt
gtcaacgaaggaaggttgcttagccaaacaatgaaggatcatctagtaagagttgcaaat
gaagctgaatttattctgaataggcagagagcagaggatattcacagacatgcagaattt
gagtcattgtgtgcgcagtattctgcagacaaacgagaggatgagaaaatgtgtgatcat
ttgataagagctgcaaaatatcgagaccatgttacagcaactcaactaatccagaaagtt
atcaacattctcacagacaagcatggagcctggggaaattctgcagtgagtcgtcctcgt
gagttctggcgccttgactactgggaagatgacttgcggcgccggcgacgatttgtgcgt
aaccctctaggatcgacacatcctgaagcgacactaaaaacagccgtggaacatgcggca
gatgaagatatccttgctaaaggaaaacagtccatcaagagtcaggctttgggaaatcag
aactcagaaaacgagatcctcctggaaggcgacgacgatactctgtcatccgtggatgag
aaagatttagagaatcttgctggtcctgttagcctgagtacaccagctcagcttgtggcc
ccctctgttgtggtaaagggtactctttctgtcacctcttctgaactctactttgaggtg
gatgaagaggatcccaacttcaaaaaagtcgaccccaagatcctggcatacacagaaggg
ctgcatggaaaatggctgttcacagagatacggtcaatcttctctcgtcgttatcttttg
caaaatacagccctggagatctttatggcaaacagagttgctgtaatgttcaacttccca
gaccctgcaacagtgaagaaagtagttaactatctacctcgtgttggcattggaacaagc
tttggattgcctcaaaccaggcgtatttctttagctagcccacgacaacttttcaaagct
tctaatatgacccagcgatggcagcacagagagatttcaaattttgaatatttgatgttt
ctcaacaccatagcaggacgcagttacaatgacttaaatcagtatccagtgtttccctgg
gtcatcactaattatgaatcagaagaactggatcttaccttacccagcaattttagagat
ttgtccaagccagtaggagctttgaatccaaaaagagcggcattctttgcagagcgtttt
gaatcttgggaagatgatcaagttccaaagtttcactatggtactcattactcaactgca
agttttgttcttgcatggctgctgagaatagaaccctttacaacttatttcctaaatttg
caaggagggaaatttgatcatgcagatcgaactttttcatcaatttccagagcttggcga
aactgtcagcgtgatacatctgatattaaggagttgatccctgaattttattatctccct
gagatgtttgtcaactttaataattataatcttggagtgatggatgatgggacagttgtg
tctgatgttgaacttcctccttgggccaaaacctctgaagaatttgttcgcacaaataga
ttggccctggagagtgaatttgtttcctgccaacttcaccaatggattgatctcattttt
ggctataaacagcaaggaccagaggctgtccgagccctgaacgtgttctattatctgacc
tatgaaggagctgtcaatctgaattcgataaatgatcctgtgttgagagaggctgttgaa
gctcaaatccgaagttttggacagacgccttctcagctgctcatagagcctcatcctccc
agaggttctgccatgcaagcaagtccattgatgttcacagaccaagcccagcaggatgtt
atcatggtcctcaaatttccctccaattcccctgtcactcacgtggcagccaacacccag
cctggtttggtgactcctgctgttatcacagtcactgctaacaggctgtttgctgtgaac
aagtggcacaaccttcctgctcatcaaggtgctgtacaagaccagccataccagctgcca
gtggaaatcgatcctctcatagccagcaacacaggaatgcacagaaggcaaatcactgac
cttttagaccaaagtattcaagtgcattcccagtgctttgtcatcacatcggacaaccgc
tatattctcatctgtggcttctgggataagagtttccgagtatattctacagacacagga
aaattggtccaagtggtgtttggacattgggatgttgtcacttgcctcactcgttctgag
tcgtatattgggggaaattgctacattctctcagggtcacgtgatgcaacccttttgctg
tggtactggaatggaaaaagcagtggtattggagataacccaggcagtgagactactaca
cctcgggccattttgacaggccatgactatgagatcacatgtgcggcagtatgtgctgag
ctgggcctggtgttgagtggttctcaagaaggaccctgtctcatacattctatgaatgga
gacctgttaaggaccttggagggtcctgaaaattgcctgaaaccaaaactcatccaggct
tcaagagagggccattgtgtcatattctatgaaaatggcctcttctgtactttcagtgtg
aatggaaaactccaggccaccatggaaacaaatgataacataagagccattcagctgagc
cgggacgggcagtacctgctcacaggaggagacaacggtgtggtcatggtctggcacgta
gcagacctcaagcagctctttgcctacccaggctgcgatgctggaatccgggccatggcg
ctgtcgtacgaccaaaggtgcatcatttctggcatggcttcaggaagcattgttctgttt
tacaacgactttaaccggtggcatcatgagtaccaaacccgctactga
DBGET
integrated database retrieval system
