KEGG   Otolemur garnettii (small-eared galago): 100959528
Entry
100959528         CDS       T07855                                 
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6
  KO
K12855  pre-mRNA-processing factor 6
Organism
oga  Otolemur garnettii (small-eared galago)
Pathway
oga03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oga00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100959528 (PRPF6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oga03041]
    100959528 (PRPF6)
Spliceosome [BR:oga03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    100959528 (PRPF6)
 Complex C
   U5 SnRNP specific factors
    100959528 (PRPF6)
SSDB
Motif
Pfam: PRP1_N TPR_14 TPR_19 HAT_PRP39_N Suf HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_Syf1_CNRKL1_C TPR_16 TPR_17 TPR_2 TPR_8 TPR_1 TPR_CcmH_CycH FAT TPR_21 ARM_TT21_C ARM_TT21_2nd
Other DBs
NCBI-GeneID: 100959528
NCBI-ProteinID: XP_023367765
Ensembl: ENSOGAG00000007573
LinkDB
Position
Unknown
AA seq 921 aa
MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
KKNQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
RKIGQARNTLMDMRLSQVRICHVIVPYRWRNEPRFAFSVYAEADCLSMWEGPEILLHRHV
PFPCGSSLYVGALLLFPFPSQSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAA
ELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECCPTSVELWLAL
ARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVE
INREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRKHTWMEDADSCVAHSALECAR
AIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWL
AGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMK
SVKLEWVLGSIAAAQELCEEALRPYEDFPKLWMMKGQIEEQEGQMEKAREAYSQGLKKCP
HSTPLWLLLSRLEEKIGQLTRARAILEKSRLRNPKNPELWLESVRLEYRAGLKNIANTLM
AKALQECPNSGILWSEAIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKITKA
REWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKRCENAEPRHGELWCAVSKDIT
NWQRKIGEILVLVAGHIKNTF
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgaacaagaagaagaagcctttcctgggcatgcccgcgccgctcggctacgtgccgggg
ctgggccggggtgccactggcttcactacccgatcagacattgggccagcccgggatgca
aatgatcctgtagatgatcgccatgcaccacccggcaagagaaccgttggggatcagatg
aaaaaaaaccaggctgctgacgacgatgacgaggatctgaatgacaccaactatgatgag
ttcaatggctacgctggaagccttttctcaagtgggccgtatgagaaagatgatgaggaa
gcagatgctatttatgcagctctggataaaaggatggacgaaagaagaaaagaaaggagg
gagcaaagagagaaagaagaaattgagaaatatcgtatggaacgccctaaaatccaacag
cagttctcagatctaaaaaggaagttggcagaagtcacagaagaagagtggctgagcatc
cctgaggttggcgatgctagaaacaaacgccagcggaacccacgctatgagaagctgacc
cctgttcctgacagtttctttgccaaacacttacagactggagagaaccatacttcagtg
gacccccgacaaactcaatttggaggtcttaatacaccctatccagggggactgaatacc
ccatatccaggtggaatgacaccaggattgatgacacctggcacaggtgagctggacatg
aggaagatcggccaggcaaggaataccctaatggacatgaggctgagccaggtgagaatt
tgtcatgtaatagttccttacagatggcgcaacgagcctcggtttgcattttctgtttat
gctgaagctgattgtctttccatgtgggagggacctgagattctgctccacaggcatgtg
cctttcccatgtggctccagtctgtatgttggagcccttctgctctttccttttccctca
cagagtgaagatgtgtggttagaagcagccaggttgcagcctggggacactgccaaggct
gtggtggcccaagctgtccggcatctcccacagtctgttaggatttatatcagagcagca
gagctggaaacagatattcgagcaaagaagcgggttcttcggaaagctcttgagcatgtc
ccaaactcagttcgcttgtggaaagcagccgttgaattggaagagcctgaagatgctaga
atcatgctcagccgtgctgtggagtgctgccccaccagcgtggagctctggcttgctctg
gcaaggctggagacctatgaaaatgcccgaaaggtcttgaacaaagcacgtgagaacatt
cctactgaccggcacatctggatcactgctgctaaactggaggaggccaatgggaacaca
cagatggtggagaagatcattgaccgggctatcacttctctgcgggccaatggtgtagag
atcaaccgtgagcagtggattcaggatgccgaggaatgtgacagggcagggagtgtggcc
acctgccaggcagtcatgcgtgctgtgattggcatcggaattgaggaggaggaccggaag
cacacctggatggaagatgcagacagttgtgtggcccacagtgccctggagtgtgcacgt
gccatctatgcctacgccctgcaggtgttccccagcaagaagagcgtgtggctacgagct
gcatactttgagaagaaccacggcaccagggagtccctggaagccctcctgcagagggct
gtggctcactgccccaaagcggaggtgctatggctcatgggcgccaagtccaagtggcta
gcaggggatgtgcctgcagcaaggagcatcttggctctggccttccaggctaaccccaac
agtgaggagatctggctggcagccgtgaagctggagtccgaaaacaacgagtacgagcgg
gctcggaggctgctggctaaggcgcggagcagtgcacccactgctcgggtgttcatgaag
tctgtgaagctggagtgggtattgggcagcatcgcagccgcgcaggagctgtgtgaggag
gccttgcgtccctacgaggacttccccaagctgtggatgatgaaggggcagatcgaggag
caggaagggcagatggagaaggcacgggaggcctacagccaggggttgaagaagtgtccc
cactctacacccttgtggcttttgctctcgcggctggaagagaagattgggcagctcacc
cgggcacgggctattctggagaagtctcgtctgaggaacccaaagaaccctgagctatgg
ttggagtctgtgcggctggagtaccgtgcggggctgaagaacattgccaacactctgatg
gccaaggcactgcaagagtgccccaactctggtatcctgtggtctgaagccatttttctt
gaggcaaggccccagaggaagacaaagagtgtggatgccttgaagaagtgtgaacacgat
ccccatgtgctcctggctgttgccaagctattttggagcgagcggaagatcaccaaggcc
agggagtggttccaccgcaccgtgaagattgattcggacctgggggatgcatgggctttc
ttctataagtttgagctgcagcatggcactgaggaacagcaggaggaggtgaggaagcgc
tgtgagaacgcagagcctcggcatggggaactgtggtgcgccgtgtccaaggacatcacc
aactggcagaggaagattggagagatccttgtgttggtggccggccacatcaagaacacc
ttctga

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