Otolemur garnettii (small-eared galago): 100959556
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Entry
100959556 CDS
T07855
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
oga
Otolemur garnettii (small-eared galago)
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oga04040
]
100959556 (SCN11A)
Ion channels [BR:
oga04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100959556 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
100959556
NCBI-ProteinID:
XP_003794518
Ensembl:
ENSOGAG00000009240
LinkDB
All DBs
Position
Unknown
AA seq
1770 aa
AA seq
DB search
MDDRCYPVIFPDARNFRPFTSDSLAAIEKRITIQKEKKKAKEKTGDEPPPRPQLDLRASR
KLPKLYGDIPCELIAKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFIFGPFNSIRS
FAIRISVHSLFSMFIICTVIINCVFMARCGSKDNNSTETHSAEFVFTGIYIFEALIKILA
RGFILDEFSFLRDPWNWLDSIVIGTAIVSYFPSIRINLSSLRSFRVLRALKAISVVSGLK
VIVGALLRSVKKLVNVMILTLFCLSIFALIAQQLFMGGLNQKCIKKDCDRDNSKANESCF
EKKENSTEFKMCGTWMGSRNACSEQFECSHTDYNPDYNYTNFDHFGWSFLAMFRLITQDS
WEKLYQQTLRTCGLYSVFFFVVVIFLGSFYLINLTLAVVTMSYEEQNRNVAAETEAKEKM
FQEAQQLLKEEKEALVAMGIDRSSLNSLEASLFSPQKRKIFGYKKRKSFFLRESGKNQPL
GSDSDEDCSKKPHVLEQTKRLSQNLSLDHFDEHGDPLQRQRALSAVSILTITMREQEKSQ
EPCLPCGKNLASEYLVWECSPQWLCIKKVLRTVMTDPFTELAITICIIINTVFLAMEHDN
MDNSFENILNTGNMVFTGIFIAEMCLKIIALDPYHYFRRGWNIFDSIVAVLSFADVMTNK
SSKPRWQFLRSFRVLRIFKLAKSWPTLNTLIKIIAHSVGALGNLTVVLAIVIFIFSVVGM
QLFGSTFKSAKTEEPCDTTNPCPRRWHMGDFYHSFLVVFRILCGEWIENMWECMQANGIP
LCIIVFVSIMVIGKLVVLNLFIALLLNSFSNEERDGNLEGEAKKTKVHLALLRFHKAFCF
VIHTFAHFYRRWCRRQNSPKQKEMRRGPATESKDVIPLVTEMKKISETQEFGILTSAPRT
LGTGHDRTWLAPLAEEEVDIESPDGENAQPITQPKAERQAYELHQENKKSASPGVQSVEI
DIFPEFEQNPPKKSDATSMLSECSTIDLQWQFQLPEVVPKREPERCLPKGLGCSFPCCGM
DKTKSPCITWWNLRKTCYQIVKHSWFESFIIFVILLSSGTLVFEDVYLKERPQIEALLNC
TDKIFTHIFILEMGLKWVAFGFTKYFTSAWCWLDFIIVIVSVPSLIDLKGLRSFRTLRAL
RPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFSGKFGRCLNVTN
AIDISIIADKNQCVSHNYSWHNLEVNFDNVGNAYLALLQVATFKGWMDIMYAAVDSGERE
QQPVFENNSLMYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKISGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPLNKCQGLVFDLVTSQVFDIVIISLIILNMVIMMAESYNLTED
TKTILDNLNRAFVVIFTIECLIKIFALRQYYFINGWNLFDCVVVVLSIVSTIVSELEQKL
INFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIL
GMNYFSKVKPESGIDDIFNFRTFGSSMLCLFQITTSAGWDALLKPMLSEKSCNSSSENCR
HLRAIATTYFVSYIIISFLIVVNMYIAVILENFNTATEESEEPLGEDDFEIFYEVWEKFD
PEATQFIKYSALSDFADSLPEPLRVAKPNKFQFLVMDLPMVSGDRLHCMDVLFAFTTRVL
GDSDGLDSMKTMMEEKFMEANPSKQLYEPIVTTTKRKEEERGAVIIQKAFRKYWKTAKGD
LENRPHLPLQTLCNGDLSSSGVAQGKVHCD
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaggtgctacccagtgatcttcccagatgcacgcaatttccgccccttcact
tctgattctctggctgcaattgagaagcggatcaccatccaaaaggagaaaaaaaaagct
aaagagaagacaggggatgaacccccacctcggcctcagcttgacctgcgggcttcaagg
aagttgcccaagctctatggtgacattccctgtgagctgatagcaaagcccctggaggac
ttggatccattctacagaaatcataagacatttatggttctgaacaaaaagagaacaatc
taccgcttcagtgccaagcgtgccttgttcatttttgggcctttcaattcaatcagaagt
tttgccattagaatctccgtccattcattattcagcatgttcatcatctgcaccgttatc
atcaactgtgtgttcatggcgagatgtggtagtaaggacaataatagcacagaaactcac
agtgccgagtttgtcttcactggaatttatatttttgaagctctgataaaaatattggca
agaggtttcattttggatgaattctcttttcttcgagatccatggaattggctggactcc
attgtcattggaacagcgattgtatcatattttccaagtatccgcatcaacctttcctca
ctgcgtagcttccgagtgctcagagctttgaaggccatttcagtagtttcaggtctgaag
gttattgttggagccttgctgcgttctgtgaagaaacttgtcaatgtgatgatcctcacc
ctcttctgccttagcatctttgccttgatagctcagcagctcttcatgggaggcctgaac
cagaaatgtatcaagaaagactgtgatagagataacagtaaagctaacgaatcttgcttt
gaaaagaaagaaaattccactgaattcaaaatgtgtggcacctggatgggtagcagaaat
gcctgttctgagcaatttgaatgcagccacaccgactataatcctgactataattatacg
aattttgaccactttggctggtcttttcttgccatgttccggcttattacccaagattcc
tgggagaagctttatcaacagaccctgcgcacctgtgggctctattcagtcttttttttt
gtggtggtcatcttcctgggctcattctacctgattaacttaaccctggctgtcgtcacc
atgtcttacgaggagcagaacagaaatgtagctgcagagacagaggccaaggaaaagatg
tttcaggaagcccagcagctgctaaaggaggaaaaggaggctctggttgccatgggaatt
gacagaagttcacttaattctcttgaagcatcattgttttcccctcaaaagagaaagatc
tttggttataagaaaaggaagtccttctttttgagagagtctgggaaaaatcagcctcta
ggatcagattcggatgaagattgctcaaaaaagccacatgtcctagagcaaaccaaacga
ctgtctcagaatctgtcgctggaccactttgatgaacatggtgaccccttacaaagacag
agggcactgagtgctgttagcatccttaccatcaccatgagggaacaagaaaagtcacag
gaaccttgccttccatgtgggaaaaacctcgcatccgaataccttgtgtgggaatgtagc
ccccagtggctatgcattaagaaggtcctgagaactgtgatgactgacccctttactgag
ctggccatcaccatctgcattataatcaacactgtctttttggccatggagcatgacaat
atggacaacagttttgaaaatatcttgaatacagggaatatggttttcactggcattttc
atagcagaaatgtgcctaaaaattattgcactcgatccctaccattactttcgcagaggc
tggaacatttttgacagcattgttgctgttctgagttttgcagatgtgatgaccaataaa
tcttcaaaaccaagatggcaattcttgcgttccttcagagtgctgaggattttcaagtta
gccaaatcctggccaactttaaacacactaattaagataatcgcccactctgttggagcc
cttggaaacctgactgtggtcctagctattgtgatctttattttctcagtagttggcatg
cagctttttggctctacattcaagtctgcaaagacagaagaaccctgtgacactactaac
ccatgcccacggcgttggcacatgggggatttctaccactcttttctggtggtattccgc
atcctctgtggggaatggattgaaaacatgtgggaatgtatgcaagcaaatggaatacca
ttgtgcattattgtctttgtgtcaattatggtgataggaaaacttgtggtactcaacctc
ttcattgccttactgctcaattcctttagcaacgaggagagagatggtaacttagaagga
gaagccaagaaaactaaagtccacttagccctgcttcggttccataaggctttttgtttt
gtgatacacacttttgcacatttctatcgaagatggtgcaggaggcaaaactcaccaaag
caaaaagagatgagaagaggtcctgctacagagagcaaagatgtcattcctctggtcaca
gagatgaaaaagatctcagagacccaggaatttggtatactaacctctgcaccaaggacc
ttgggcactgggcatgatcggacttggctggccccacttgcagaggaagaagttgacatt
gaatctcctgatggagaaaatgcacagcccatcacacagcctaaagctgaaagacaggct
tacgaactccatcaggagaataagaaatctgccagcccaggagttcaaagcgtggaaatc
gacatattccctgaatttgaacagaatcccccaaagaagtctgatgccaccagtatgcta
tcagaatgtagcaccattgatctgcagtggcaatttcagttaccagaagtggttcccaaa
agggaaccagagagatgtttgcccaaaggcctgggttgctcctttccatgttgtggaatg
gacaagacaaagtccccctgcatcacttggtggaacctgcggaaaacctgctaccaaatc
gtgaaacacagttggtttgagagctttattatctttgtgattctgctgagcagtgggaca
ctggtatttgaagatgtttaccttaaagaaagaccccaaatcgaagcactactaaattgt
actgacaaaattttcacacatatttttattctggagatgggtttgaaatgggtggctttt
ggatttacaaaatatttcaccagtgcctggtgctggctcgactttatcattgtaattgtc
tctgtgcccagtctcattgacttaaaggggctgaggtccttccggactctacgagcactg
aggcctcttcgagcactatcccagtttgaaggaatgaaggtggtggtcaatgctctcata
ggtgccatacctgctattctgaatgttttacttgtctgcctcattttctggctcatattt
tgtatcctgggagtaaacttcttttctggaaaatttggaagatgccttaatgtaacaaat
gcaattgatatttctattattgctgacaaaaatcaatgtgtgagtcacaattactcctgg
cacaatttggaagtcaactttgacaatgtggggaatgcttacctggctctgttgcaggtg
gcaacctttaagggatggatggatattatgtatgcagctgtcgattccggagagagagaa
caacagccagtatttgagaataattcactcatgtacctttacttcgtggtttttatcatc
tttggctcattcttcactctgaatctctttattggtgttattattgacaacttcaaccaa
caacagaaaaagataagtggccaagacatttttatgacagaagaacagaagaaatactat
aatgcaatgaaaaaattaggatccaaaaaacctcaaaaacctattccaaggcctctgaac
aaatgtcaaggtctcgtgtttgacctagtcacaagccaggtctttgacatcgtcatcata
agcctcattatcctaaacatggttatcatgatggctgaatcatataacctaaccgaagac
acaaaaaccatccttgataatctcaaccgggcttttgtggtcatctttacaatagagtgt
ctcatcaaaatctttgctttgaggcaatactacttcatcaatggctggaatttatttgat
tgtgtggttgtggtcctttctattgttagtacaattgtttctgagttggaacagaagctc
ataaatttccctccgacgctcttcagaattgtccgcttggctaggattggccgaatcctg
agacttgttcgggcagcccgaggaattaggactctcctctttgctcttatgatgtctctt
ccctctctattcaacattggtcttctactctttctggtgatgtttatttatgccattttg
ggcatgaactatttttccaaagtgaaaccagagtctggaattgatgacattttcaacttc
cgaacttttggcagcagcatgctctgtctcttccagataaccacatcggcaggttgggat
gccctccttaagcccatgctgtcagaaaaatcttgtaattcctcttcagagaactgtcgc
catctccgtgccatagccacaacctactttgtcagttatatcattatctcctttcttatc
gttgtcaatatgtatattgctgtgattttagagaacttcaatacagcgactgaagaaagt
gaggaacctttgggtgaagatgactttgaaatattctatgaagtttgggaaaagtttgac
ccagaagcaacccagtttatcaaatattctgccctctcggactttgctgattcccttcct
gagcctttgcgtgtggcaaagccaaacaaatttcaatttctagtaatggacttgcccatg
gtgagtggagatcgcctccactgcatggatgttctctttgctttcaccactagggtacta
ggtgattctgatggcctggatagcatgaaaacaatgatggaggagaagttcatggaagcc
aatccttccaagcagttatatgaacccatagtcactaccaccaagagaaaggaagaggaa
agaggtgctgttattattcaaaaggcctttagaaagtattggaagacggccaagggtgac
ttggaaaacaggccccatttgccactccagactctttgcaatggagacttgtctagctcc
ggggtggcccagggcaaggtccactgtgattga
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integrated database retrieval system
