Otolemur garnettii (small-eared galago): 100959640
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Entry
100959640 CDS
T07855
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100959640 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oga04121
]
100959640 (TRIM54)
Ubiquitin system [BR:
oga04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100959640 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
PHP
DUF349
Sina_RING
CoiA_N
COG2_C
DD_DDX21-DDX50
MIF4G_like_2
Zn_ribbon_FGT1_2
FlgN
DUF1421
UvrD_C
DUF5799
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
100959640
NCBI-ProteinID:
XP_003787603
Ensembl:
ENSOGAG00000007145
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
RPEPGYESMDQFTVSVEHVAEMLRTIDFQPGASGEEEDEEASLDRDEGSAGPEEERLEGP
EGESGLH
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacagtgggtttcaagccgctgctaggggatgcacacagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaaaccggtggtgatccta
ccctgccagcataacctgtgccggaagtgtgccaacgacgtcttccaggcctcaaaccct
ctgtggcaatcccgaggctctactactgtgtcttcaggaggccgattccgctgcccatct
tgcaggcatgaggttgttctggaccgacacggtgtctatggcctgcagcgaaacctgcta
gtggagaacattattgacatttataagcaggagtcatcaaggccactgcactccaaggct
gagcagcacctaatgtgtgaggaacatgaggaagagaagatcaatatctactgcctgagc
tgtgaagtgcccacctgctctctctgcaaggtctttggtgcccacaaggactgtgaggtg
gcccctctgcccaccatttacaaacgccagaagagtgaactcagcgatggcatcgcgatg
ctagtggcaggcaatgaccgtgtgcaagcagtgatcacacagatggaggaggtgtgccag
acaattgaggacaacagccggaggcagaagcagttgctaaaccagaggttcgagtccctg
tgcgctgtgctggaggagcgcaagggcgagctgctgcaagcgctggcccgggagcaggag
gagaagctgcagcgcgtgcgcggcctcatccggcagtacggggaccacctggaggcctcc
tctaagttggtggagagcgccatacagtccatggaggagccgcagatggctctgtacctc
cagcaggccaaggagctgatcaataaggtcggggcaatgtcgaaggtggagctggcagga
cggccggagccaggctatgagagcatggaccagttcaccgtgagcgtggagcacgtggcc
gagatgctgaggaccatcgacttccagccgggcgcttccggggaggaagaggatgaggag
gcgtctttggaccgggacgagggcagcgcagggccggaggaagagcggctggaggggccg
gaaggtgagagtggcctgcactga
DBGET
integrated database retrieval system
