Otolemur garnettii (small-eared galago): 100959735
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Entry
100959735 CDS
T07855
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100959735 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oga03019
]
100959735 (EXOSC1)
Messenger RNA biogenesis [BR:
oga03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100959735 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
100959735 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
100959735
NCBI-ProteinID:
XP_003787345
Ensembl:
ENSOGAG00000016259
UniProt:
H0XEZ6
LinkDB
All DBs
Position
Unknown
AA seq
195 aa
AA seq
DB search
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKTSENGALPVVSVMRETE
SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHGESGVQMVPISWCEMQCPKTHIK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacccgtgagatactgcatacctggcgaacgtctgtgtaacttggaggagggc
agcccgggcagcggaacctacacccggcacggctacatcttttcgtcgcttgctggctgc
ctgacgaagactagcgagaacggcgcgcttcctgtggtatctgtgatgagagaaacagag
tctcaattgctgccagatgtgggagctattgttacctgtaaggtctctagcatcaattca
cgctttgctaaagtacacatcctatatgtggggtccacaccacttaagaactcttttcga
ggaacaatccgcaaagaagatgtccgagcaactgagaaagacaaggttgaaatttataaa
agtttccgcccaggtgacattgtcttggccaaagtgatctccctaggtgatgcacagtcc
aactacttgctgaccactgccgaaaatgagctaggagtggtggtagcccacggtgagtca
ggtgtccagatggttcccataagctggtgtgagatgcagtgccccaagacccacattaaa
gagttccggaaagtggcccgagtacagcctgaattcttgcagacctaa
DBGET
integrated database retrieval system
