| Entry |
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| Symbol |
UPF2
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| Name |
(RefSeq) regulator of nonsense transcripts 2
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| KO |
| K14327 | regulator of nonsense transcripts 2 |
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| Organism |
oga Otolemur garnettii (small-eared galago)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:oga00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100960042 (UPF2)
03015 mRNA surveillance pathway
100960042 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:oga03019]
100960042 (UPF2)
Messenger RNA biogenesis [BR:oga03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100960042 (UPF2)
mRNA cycle factors
P-body specific factors
100960042 (UPF2)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
1271 aa
MPAERKKPASMEEKDSLLNNKEKDCGERRPVSSKEKPKDDLKLTAKKEVSKTPEDKKKRL
DDDKRKKEDKERKKKEEEKVKAEEESKKKEEEEKKKQEEEERKKQEEQAKRQQEEAAAQM
KEKEESVQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKSIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSCQNKESNRDDSKEAKESKDNKEASSPDDLELELENLEINDDTLELEGGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK
DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSKD
AMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLTD
SNKENETDEENTEVMIKGGGLKHIPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVA
IPLHLKSQLRKGPPLGGGEGETESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQ
QQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA
DLIFKTGGRRR |
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| NT seq |
3816 nt +upstreamnt +downstreamnt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagactctttactaaacaac
aaagaaaaagactgcggtgaaaggcggccagtgagcagcaaggagaagccaaaagacgat
ctcaaactcactgccaagaaggaggtcagcaagacccctgaggacaagaagaagagacta
gacgacgataagagaaaaaaggaagacaaggagcgcaagaaaaaagaagaagaaaaggtg
aaggcagaggaagaatcaaagaaaaaagaggaagaggagaaaaagaaacaggaagaggaa
gagagaaagaagcaagaggagcaggcgaaacgtcagcaagaagaagcagctgctcagatg
aaagagaaagaagaatccgttcagcttcatcaagaagcttgggaacgacatcaattaaga
aaggaacttcgtagcaaaaaccaaaatgctccagacaaccgaccagaggaaaatttcttt
agtcgcctagactcaagtttgaagaaaaataccgcttttgtcaagaagctaaaaactatt
acagaacagcagagagactccttgtcccatgattttaatggcctaaatttaagcaaatac
attgcagaagccgtagcttctattgtggaagccaagctgaaaatctctgatgtgaactgt
gctgtgcacctgtgctctcttttccaccagagatatgctgactttgctccatcacttctt
caggtctggaaaaaacatttcgaagctaggaaagaggagaaaacgcctaacattaccaag
ttaagaaccgatttgcgttttattgcagaattgacgatagttgggattttcactgataag
gaaggtctttccttaatctatgaacagctaaaaagtattattaatgctgatcgggaatcc
cacactcatgtttctgtggtgattagtttctgtcgacattgtggagatgatattgctgga
cttgtaccaaggaaagttaaaagtgctgctgagaagtttaatttgagttttcctcctagt
gagataattagtccagagaaacaacagcctttccagaatcttttaaaagagtactttacg
tctttgaccaaacacctgaaaagggaccacagggagctccagaatactgagagacaaaac
aggcgtattctacattctaaaggggagctaagtgaagatagacataaacagtatgaggaa
tttgctatgtcttatcagaagctgctggcaaattctcagtccttagcagatctcttggat
gaaaatatgccagatcttcctcaagacaaaccaacaccagaagaacatgggcctggaatt
gatatatttacacctggtaaacctggagaatatgacttggaaggtggtatatgggaagat
gaagatgctcggaatttttatgagaacctcattgatttgaaggcttttgtcccagccatc
ttgtttaaagacaatgaaaaaagttgtcagaataaagagtccaaccgagatgattccaaa
gaggcaaaagaatctaaagataataaggaggcatcaagtcctgatgatttggaacttgaa
ttggagaatctagaaattaatgatgacaccttggagttagaaggtggagatgaagctgaa
gatcttacaaagaaacttcttgatgaacaagaacaagaggatgaggaagccagcactgga
tctcatctcaagctcatagtggatgctttccttcagcagttgcccaactgtgtcaaccga
gaccttatagacaaggctgcaatggatttttgtatgaacatgaacacaaaggcaaacagg
aagaagctggtacgggcgctcttcattgttcctagacaaaggttggatttgctaccattt
tatgcaagattggttgctacattgcatccctgcatgtctgatgtagcagaggatctttgt
tccatgctgaggggggatttcagatttcatgtacgaaaaaaggaccagatcaatatcgaa
acaaaaaataaaaccgttcgttttattggagaactaactaagtttaagatgttcacaaaa
aatgatacattacattgtttaaagatgcttctgtcagacttttctcatcaccacattgaa
atggcatgtactctactggagacatgcggacggtttcttttcagatctccagagtctcac
ttgaggaccagtgtacttctggagcaaatgatgagaaaaaaacaagcaatgcatcttgat
gcaaggtatgtcacaatggtagagaatgcatattactactgcaacccacctccagccgag
aaaaccgtgaaaaagaaaagacctcctctccaggagtacgtccggaaacttctgtacaaa
gatctctctaaggttaccaccgagaaggttttgagacagatgcgaaaattaccctggcag
gaccaagaagtgaaagactatgttatttgttgtatgataaacatctggaatgtgaaatat
aacagtattcactgtgtagccaacctcttagcgggactcgtgctctaccaagaggacgtt
ggcatccatgttgtggatggagttttggaagatattcgattaggaatggaggttaatcaa
cctaaatttaatcagaggcgtattagcagtgccaagttcttaggagaactttataattac
cgaatggtggaatcagctgttatcttcagaactctttattcttttacttcctttggtgtt
aaccctgatggttctccaagttcactggaccctcctgagcatcttttcagaattagacta
gtatgtactattttggacacatgtggccagtactttgacagaggttccagtaaacgaaaa
ctcgattgcttccttgtatattttcagcgttatgtttggtggaagaaaagtttggaggtt
tggacgaaagaccatccatttcctattgatatagattacatgatcagtgatacactagaa
ctgctaagaccaaagatcaaactgtgtaattctctggaagaatccatcaggcaggtacag
gacttggaacgagaattcttaataaaactaggcctagtaaatgacaaagattcaaaagat
gctatgacagaaggagaaaatcttgaagaggatgaagaagaagaagaagggggagctgag
acagaagaacaatctggaaatgaaagtgaagtaaatgagcccgaagaagaggagggttct
gataatgatgatgatgagggagaagaagaagaggaggagaatacagattaccttacagat
tccaacaaggagaacgaaactgatgaggagaatactgaggtaatgattaaaggtggtgga
cttaagcacataccttgtgtagaagatgaggacttcattcaagctctggataaaatgatg
ctagaaaaccttcagcaacgaagtggtgaatctgttaaagtgcaccaacttgatgtggct
attcctttgcatctcaaaagccagctgaggaaagggcccccacttggtggtggggaaggg
gagacagagtctgcagacacgatgccatttgtcatgttaacaagaaaaggcaataaacag
cagtttaagattcttaatgtgcccatgtcttctcaacttgctgcaaatcattggaaccag
caacaggcagagcaagaagagaggatgagaatgaaaaagctcactctagatatcaatgaa
cggcaagaacaagaagattatcaagaaatgttgcagtctctcgcacaacgcccagctcca
gccaacaccaatcgggagcggcgacctcgttaccaacacccaaagggagcacctaatgca
gatctaatctttaagactggtgggaggagacgttga |
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