Otolemur garnettii (small-eared galago): 100960099
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Entry
100960099 CDS
T07855
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
oga
Otolemur garnettii (small-eared galago)
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oga04131
]
100960099 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oga04147
]
100960099 (COPB1)
Membrane trafficking [BR:
oga04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100960099 (COPB1)
Exosome [BR:
oga04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100960099 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
100960099
NCBI-ProteinID:
XP_003781171
Ensembl:
ENSOGAG00000011612
UniProt:
H0X562
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKLKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADV
LEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEITVGPVQKLVTEMGTYATQSALSSSRPTKKEEDRP
PLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMNCKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNMIDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIHQGPDAAVTGHIRIRAKSQGMALSLGDKINLSQKKTSI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgctgagaacgtgtgctatacgttaattaacgtgccaatggattcagaacca
ccatctgaaattagcttaaaaaatgatctagaaaaaggagacgtgaagttaaagactgaa
gctttgaagaaagtaatcattatgattctaaatggtgaaaagcttcctggacttctgatg
accatcattcgttttgtgctacctcttcaggatcacaccattaaaaaattacttctggta
ttttgggaaattgttcccaaaacaactccagatggaagacttttgcatgaaatgattctt
gtatgtgatgcatacagaaaggatcttcaacatcctaatgaatttattcgaggatctact
cttcgttttctttgcaaattgaaagaagcagaattgctagaacctttaatgccagccatc
cgtgcttgtttggagcatcgacacagctatgttagaagaaatgctgttttggccatttat
actatctatagaaattttgaacatcttatacctgatgcccctgaactgatacatgatttt
ctggtgaatgagaaggatgcaagttgcaaaaggaatgcatttatgatgctaattcatgca
gatcaggatcgagctttggattacctaagtacttgtattgaccaagttcagacatttgga
gacattctgcagttggttattgttgaactaatttataaggtctgccatgctaatccatca
gaaagagctcgtttcattcgctgcatctataacttactacagtcatctagccctgctgta
aaatacgaagctgctgggacattagtgacactctctagtgcaccaactgcaatcaaggct
gctgctcagtgttacattgatttaattattaaggagagtgacaataatgtaaagctcata
gttttggatcgcttgatagaattaaaagagcatcctgcccatgaacgagtactacaggat
ctagttatggacatcctaagagtattgagtacaccagacttagaagtacgcaaaaaaact
ctgcagttggcactggatcttgtttcttctaggaatgttgaagagctggtcattgtcctg
aagaaggaagtgataaaaacaaataatgtgtcagagcacgaagatactgacaaatacaga
caactccttgtgcgaacattgcattcctgttctgtccgatttccagatatggctgcaaat
gttattcctgtgttaatggaatttctcagtgacagtaatgaagcagcagctgctgatgtc
ttggaatttgttcgtgaagctattcagcgctttgataatctaagaatgcttattgttgag
aagatgcttgaagtctttcatgctattaaatctgtcaagatttaccgaggagcattatgg
atcctgggagaatactgtagtaccaaggaagacattcagagtgtgatgactgaagtccgc
aggtctcttggggaaattccaattgtagagtcagaaattaaaaaagaagctggtgaatta
aaacctgaagaagaaataactgtggggccagttcagaaattggttactgaaatgggtacc
tatgcaactcagagtgccctaagcagttctagacccaccaaaaaagaggaggacagacct
cccctgagagggttccttctggatggagatttttttgttgctgcctcccttgccacaact
ttgaccaagattgcattgcgctatgtagctttggttcaggagaagaaaaaacaaaattca
tttgttgctgaggctatgttgctcatggctactattcttcatttgggaaaatcctctctt
cctaagaagccaattactgatgatgatgtagatcgaatttccctgtgtctcaaggtctta
tctgaatgttcacctttaatgaatgacattttcaataaggaatgcagacaatccctttct
cacatgttatctgctaaactcgaagaagagaaattatctcaaaagaaagaatctgaaaag
aggaatgtgacagtacagcctgatgaccccatttctttcatgcaactaactgctaagaat
gaaatgaactgcaaagaagatcagtttcagctgagtttgctggcagcaatgggtaacaca
cagaggaaagaggcagcagatcctctggcatctaaactcaacaaggtcacccagttgaca
ggtttctcagatcctgtatatgcagaagcctatgttcatgtcaaccagtatgatattgtc
ctggatgtacttgttgtaaaccaaaccagcgatactttgcagaactgcacattagagtta
gctactctaggggatctaaagcttgtggaaaagccatctcctttgactcttgctcctcat
gattttgcaaatattaaagctaatgtgaaagtagcatcaacagaaaatggaataatcttt
ggtaatatagtttatgatgtctccggagcagcaagtgacagaaattgtgtggtcctcagt
gatatccacattgacatcatggactacatccaacctgcaacttgcactgatgctgaattc
cgtcagatgtgggccgaatttgaatgggaaaacaaagtaacagttaacaccaatatgatt
gatttaaatgactatttacagcacatattaaagtcaaccaacatgaaatgcctcactcca
gagaaggccctttctggctactgtggctttatggcagccaacctttatgctcgttccata
tttggagaagatgctctggcaaatgtcagcattgagaagccaattcaccagggaccagat
gctgctgttactggccacataagaattcgtgcaaagagtcagggaatggccttaagtctt
ggagataaaataaacttgtcgcagaagaaaactagtatataa
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