Otolemur garnettii (small-eared galago): 100960332
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Entry
100960332 CDS
T07855
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga04064
NF-kappa B signaling pathway
oga04514
Cell adhesion molecules
oga04668
TNF signaling pathway
oga04670
Leukocyte transendothelial migration
oga04933
AGE-RAGE signaling pathway in diabetic complications
oga05143
African trypanosomiasis
oga05144
Malaria
oga05417
Lipid and atherosclerosis
oga05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100960332 (VCAM1)
04668 TNF signaling pathway
100960332 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100960332 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100960332 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
100960332 (VCAM1)
05143 African trypanosomiasis
100960332 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100960332 (VCAM1)
05418 Fluid shear stress and atherosclerosis
100960332 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100960332 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oga04515
]
100960332 (VCAM1)
04090 CD molecules [BR:
oga04090
]
100960332 (VCAM1)
04091 Lectins [BR:
oga04091
]
100960332 (VCAM1)
Cell adhesion molecules [BR:
oga04515
]
Immunoglobulin superfamily
VCAM
100960332 (VCAM1)
CD molecules [BR:
oga04090
]
Proteins
100960332 (VCAM1)
Lectins [BR:
oga04091
]
I-type lectins (Siglecs)
100960332 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
C2-set
Ig_2
V-set
C2-set_2
Ig_5
Ig_4
ICAM_N
Ig_6
ICAM1_3_5_D2
C1-set
Adhes-Ig_like
PirA-like
Motif
Other DBs
NCBI-GeneID:
100960332
NCBI-ProteinID:
XP_003784159
Ensembl:
ENSOGAG00000015107
UniProt:
H0XCK5
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MPGKMVLIFGAWNVLWTLLAASQAFKIETTPEFRTLAQIGDSVSLTCSTTGCEAPSFSWR
TQIDSPLNGKVRSEGTKSTLTMDPVSFANEHSYLCTATCEPSGKLEREIQVEIYSFPKDP
EIHFSGPLEAGKPTTVKCLVPDVYPFDRLEMDLLKGGHLLKNQDFLGDVDKKSLETKSLE
VTFTPVIEDTGKALVCQARLYFDSVPKVRETMRELQVYISPKNTDISVNPSTTLQEGGSV
TMTCSSEGEPAPHIFWNKKLDDGKLQLLSGNATLTLIAMRMEDSGIYACEGINLIGKDRK
EVELIVQEKPFTVQISPGPRIVAQIGDSVVLTCGVTGCESPSFHWRTQIDSPLSGKLKSE
GTKSTLTLSPVSFENEHSYLCTVTCGRRRLEKEIQVELYSFSRDPEIEMSGLLVNGNPVT
VTCKVPNVYPFDRLEIELLKGDTILKNENFLEELDRKSLETKSLEMTFIPTTEDTGKVLV
CQAKLQIDGLEFEPKQRKSTQTLFVNVAPNDTTILVSPSSILEEGSSVTMTCSSDGLPAP
KILWSRQLNNGALQPLSENATLTLNSTKKEDSGIYVCDGINQAGTNRKAVELIIQVAPKD
INLTAFPSESIKEGDSVTISCTCGNVPETWIILKKKAETGDTVLKSIDGAYIIRKAQLED
AGVYECESKNELGSQLKSLTLAVKERETHTTLHPALLMLYCASSLIIPAIGMIVYFARRA
NMRGSYSLVEAQKSKV
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggaagatggtcctgatctttggagcctggaatgtgctgtggacgctgctcgca
gcttctcaagcttttaaaatcgagaccactccagaattcagaactctggctcagatcggg
gactccgtctcattgacttgcagcaccaccggctgtgaggctccgtctttctcttggaga
acccagatagacagcccgctgaatgggaaggtgaggagtgaggggaccaagtccacgctg
accatggatcctgttagtttcgcaaacgaacactcttacctgtgcaccgccacgtgcgaa
cccagtgggaaactggagagagaaatccaggtggagatctactcttttcctaaggatcca
gagattcatttcagtggccctctggaggctggaaagccaaccacggtcaagtgtttggtc
ccagatgtatacccgtttgacaggctggagatggatttactgaagggaggccatctcctg
aagaatcaggacttcctgggggatgtggacaagaagtccctggaaaccaagagtctggaa
gtcaccttcactcctgtcatcgaggataccggaaaagctcttgtttgtcaagccagatta
tactttgattctgtccccaaagtaagggagactatgagagaactgcaagtctacatctca
cccaagaatacagatatctctgtgaatccctccacaactctgcaggaaggtggctctgtg
acaatgacttgttccagtgagggtgaaccagctccacacattttctggaacaagaaatta
gatgatggaaagctacagctcctttctgggaatgcaactctcaccttaattgctatgagg
atggaagattctggaatttatgcgtgtgaaggcattaatctgatcgggaaagacagaaaa
gaagtggaattaattgttcaagagaaaccctttactgttcagatctcccctggaccccgg
attgttgctcagattggggactcggttgtgttgacatgtggcgtcacgggctgcgaatcc
ccgtctttccattggagaacacagatagacagccctctgagtggcaagttgaagagtgag
gggaccaagtccacgctgaccctgagccctgtgagttttgagaatgaacactcttatctg
tgcacagtgacctgtggacgtaggagactggaaaaggaaatccaggtggagctctactca
ttctctagagatccagaaattgaaatgagtggtctgctagtgaatggaaaccctgtcact
gtaacctgcaaggttcctaatgtatatccttttgaccggctggagattgaattacttaag
ggagatactattctgaaaaatgaaaactttttggaggaactggatagaaaatccctagag
accaaaagtttggaaatgaccttcatccccaccactgaagatactggaaaagttcttgtt
tgtcaggctaagttacaaattgatggactggaatttgaacccaaacaaaggaagagtaca
cagacactttttgtcaatgttgcccccaatgatacaacaatcttggtcagcccctcttcc
atcttggaagaaggcagttctgtgaccatgacatgctccagcgatggccttccagctcca
aaaatcctatggagcagacagctaaacaatggggctcttcagcctctttctgagaatgca
actcttactttaaattctacaaaaaaggaagattctggaatttatgtgtgtgatgggatt
aaccaggctggaacaaacagaaaagcagtagaattaattatccaagttgctccaaaagac
ataaaccttacagcttttccctctgagagtatcaaagaaggagactctgtcactatctcc
tgtacatgtggaaatgttccagaaacatggataatcctgaaaaagaaggcagagacagga
gacacagtgctaaaatctatagatggcgcatatatcatccgcaaggcccagctggaagac
gctggggtttatgaatgtgaatccaaaaatgagcttggctcacaattaaaaagtttaaca
cttgctgttaaagagagagaaactcacaccacgcttcaccctgcgcttctcatgctctat
tgcgcgtcctccttaatcatacccgccattggaatgatcgtttactttgccagaagagcc
aacatgagagggtcatacagtctcgtggaagcacagaaatcaaaagtgtag
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