Otolemur garnettii (small-eared galago): 100960680
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Entry
100960680 CDS
T07855
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
100960680 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oga01009
]
100960680 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oga04515
]
100960680 (PCDH20)
Protein phosphatases and associated proteins [BR:
oga01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100960680 (PCDH20)
Cell adhesion molecules [BR:
oga04515
]
Cadherins
Protocadherins
100960680 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
100960680
NCBI-ProteinID:
XP_003790208
Ensembl:
ENSOGAG00000004914
UniProt:
H0WQX1
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MRGGGNACSSRALAVSWRPATWHQRLDMGRLHGPRSSTSHRNLQHLFLFFLFVGPFSCLA
SYSRATELLYSLNEGLPAGVLIGSLAEDLRLVPRAAGRLDQQSRPPERTGAEWNPPLSFS
LASRGLSGQYVTLDNRSGELHTSSQEIDREALCLEGGGGAAWGGSISVSAPSSDSCLLLL
DVLVLPQEYFRFVKVKIAIRDINDNAPQFPVSQILVWVPENAPVNTRLAIEHPAVDPDIG
TNGVQTYRLLDYHGMFTLDVEENENGERTPYLIVMGALDRETQDQYVSIIIAEDGGSPPL
SGSATLTIGISDINDNCPIFVDSQINVTVYGNATVGTPVAAVQAVDRDLGTNAQITYSYS
QKVPQASKDLFQLDENTGVIKLFSKIGGSVLQMHRLTILANGPGCIPAVITALVYIIKVI
STPPEIVPRYIANEIDGVVYLKELEPVGTPIAFFTIRDPEGKYKVNCYLDGEGPFRLSPY
KPYNNEYLLETTKPMDYELQQFYEIAVVAWNSEGFHVKRVIRVQLLDDNDNAPVFPQPLI
ELTIEENNAPNAFLMKLYATDADSGERGQVLYFLGPDAPSYFSLDSVTGILTVSTQLDRE
EKEKYRYTVRAVDCGKPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIGV
ISVTDADAGRNGWVALSVLNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGEP
ALSSTTKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAVI
AYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMVN
LFVNDTVSNESYIESLLRKEPEINIEEKEPQISIEPTHRKVESVSCMPTLVALSVISLGS
ITLVTGMGIYICLRKGKKHSKENENVEVQIPLKGKIDLHMRERKPMDISNI
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcggagggaatgcgtgcagctcccgggccctggcagtgagctggcgccctgcg
acctggcaccagcgcctggatatggggcgtctacacggtcccaggagcagcaccagccac
aggaacctgcagcatctgtttctgtttttcctcttcgtgggacccttcagctgcctcgcg
agttacagccgggccacggagcttctgtacagcctgaacgaggggctgccggccggagtg
ctcatcggaagcctggcggaggacctgcggctggtgccccgggctgcggggaggctggac
cagcagtcgcggccgccggagcgcaccggcgctgagtggaaccccccactctccttcagc
ctggcctcccggggactgagtggccagtacgtgaccctggacaaccgctccggggagctg
cacacttcttcccaggagatcgacagagaggccctgtgtcttgaagggggtggaggggct
gcctggggcggcagcatttccgtctccgctccttcctcggactcctgccttttgctcctg
gatgtgctggtcctgccccaggaatacttcaggtttgtgaaagtgaaaatcgccatcaga
gacattaacgacaatgccccgcagttccctgtttcccagattttggtttgggtcccagaa
aatgcacctgtaaacacccggctggccatagagcatcctgcggtggacccagatataggc
actaatggggtacagacctaccgcttactggactaccacggtatgttcaccctggacgtg
gaggagaatgagaacggggagcgcaccccctacctaattgtcatgggtgccttggacagg
gaaactcaggaccagtacgtgagcatcatcatagctgaggacggtgggtctccaccactg
tcaggcagtgccaccctcaccattggcataagtgacatcaatgacaattgccctatcttt
gtagactcacaaatcaatgtcactgtgtatggaaacgctactgtaggcactccagttgca
gctgtacaggctgtggatagagacttggggaccaatgctcaaatcacctattcttacagc
cagaaagttcctcaagcatccaaggatttatttcagctagatgaaaacactggagtcata
aaacttttcagtaagattgggggaagtgttctacaaatgcacagactcaccatccttgct
aatggaccgggttgcatccctgccgtgatcactgctctggtgtacataatcaaagtcatt
tccacaccacctgaaatcgtccctcggtatatagcaaatgagatagacggtgtcgtttat
ctgaaagaactggaacctgttggcactccaattgcgtttttcaccataagagacccagaa
ggcaaatacaaggtaaactgctacctggatggtgaagggccctttaggttatcaccctac
aaaccctacaataatgaatatttgctggagactacgaagcctatggactatgaactacag
cagttctatgaaatagctgtggtggcctggaactctgagggatttcatgtcaaaagagtc
attagagtgcaactcttagatgacaatgacaacgctcccgtcttccctcagcccttgata
gaactcaccattgaagaaaacaacgcacccaacgcctttttgatgaagctgtatgccaca
gacgctgacagtggagagagaggccaagttttgtattttctgggacctgacgccccatca
tacttttccttagacagtgtcacaggaattctgacggtttcaactcagctggaccgagag
gagaaagaaaagtacaggtacacagtcagagctgtggactgtgggaagccacccagagaa
tcggtagccactgtggctctcacagtgttggataaaaatgacaacagccctagatttatc
aacaaggacttcagtttttttgtcccagaaaactttcctggctatggtgaaattggagta
attagcgtaacagatgctgacgctgggagaaatggatgggtcgccctctcagtgttgaac
cagagtgatatttttgtcatagatacaggaaagggcatgctaagagctaaagtttcgttg
gacagagagcagcaaagctcctatactttgtgggttgaagctgttgatgggggtgagcct
gccctctcctctaccacaaaaatcacaattctccttctagacatcaatgacaaccctccc
cttgttttatttcctcagtctaacatgtcttatctattggtactgccttctactctgcct
ggctccccggttacagaggtctatgctgttgataaagacacaggcatgaatgctgtcata
gcttacagcatcataggcagaagaggtcctaggcctgagtcttttaggattgatcctaaa
actggcaacattactttggaagaggcattgctgcagaccgattacggtctccatcgctta
ctggtgaaagtgagtgatcatggttaccccgagcctctccattccaccgtcatggtgaat
ctctttgtcaatgacactgtcagtaacgagagttacattgaaagccttttaagaaaggaa
ccggaaattaatatagaggagaaagaaccacaaatttcaatagagccaactcacaggaag
gtagaatctgtgtcctgtatgcccaccttagtagctctgtctgtaataagcttgggttct
atcacacttgtaacagggatgggcatatacatctgtttaaggaaagggaaaaagcattcc
aaggaaaatgaaaatgtggaagtacagattccactgaaaggaaaaatcgacttgcatatg
agagagagaaagccaatggatatttctaatatttga
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