Otolemur garnettii (small-eared galago): 100960927
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Entry
100960927 CDS
T07855
Symbol
SCN9A
Name
(RefSeq) sodium channel protein type 9 subunit alpha isoform X3
KO
K04841
voltage-gated sodium channel type IX alpha
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
100960927 (SCN9A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oga04040
]
100960927 (SCN9A)
Ion channels [BR:
oga04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100960927 (SCN9A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
100960927
NCBI-ProteinID:
XP_003795197
Ensembl:
ENSOGAG00000013021
LinkDB
All DBs
Position
Unknown
AA seq
1976 aa
AA seq
DB search
MAMLPPPGPQSFVHFTEQSLALIEQRIAEGKTKEPKEEKKDSDDEGPKPSSDLEAGKQLP
FIYGDIPRGMVSEPLQDLDPYYADKKTFIVLNKGKAIFRFNATPALYMISPFNPLRRLSI
KILVHSLFSMLIMCTILTNCIFMTMSNPPEWTKNVEYTFTGIYTFESLVKILARGFCIGE
FTFLRDPWNWLDFIVIVFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLSVFALIGLQLFMGNLKHKCFRNTTENNNETLQNIMNTVEDEEEF
RKYFYYLEGSKDALLCGFSTDSGQCPEGYTCVKAGRNPDYGYTSFDTFSWAFLALFRLMT
QDYWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEAKQK
ELEFQQMLDLLKKEQEEAEAIAAAAAEYTSIGRSRIMGLSESSSETSKLSSKSAKERRNR
RKKKNQKKLSSGEEKGDDEKLSKSESEENVRRKSFLGVEGYRQAREKRLSTPNQSPLSIR
GSLFSARRSSRTSLFSFKGRGKDLGSETEFADDEHSIFGDNESRRGSLFVPHRPPERRSS
NISQASRSPPLLPVNGKKHSAVDCNGVVSLVDGPSALMLPNGQLLPEGTTNQIHKKRRPS
SYLLSEDMLNDPCLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHTFLIWNCSPYWI
KFKKFIHFIVMDPFVDLAITICIVLNTLFMAMEHHPMTKEFENVLAVGNLVFTGIFAAEM
VLKLIAMDPYEYFQVGWNIFDSLIVTLSLVEFFLSDVEGLSVLRSFRLLRVFKLAKSWPT
LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINDDCTLPRWHMN
DFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVYMMVMVIGNLVVLNLFLALLLSSF
SSDNLTAIEEDPDANNLQIAVNRIQKGINYTKQTLREFVLKAFSKKPKISREIRQGEDLN
TKKQNYISNHTLAEMSKDHNFHKEKDKIGGFGSSMDKYLMEESTCQSFIHNPSLTVTVPI
ALGESDLENMNTEELSSDSESEYSKERLNRSSSSECSTVDNPLPGEEEAEAEHVNSDEPE
ACFTEGCVRRFPCCQVNIESGKGKIWWNIRKTCYRIVEHSWFESFIVLMILLSSGALAFE
DIYIERKKTIKIILEYADKIFTYIFILELLLKWVAYGYKTYFTNAWCWLDFLIVDVSLVT
LVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFW
LIFSIMGVNLFAGKFYECVNTTNGSRFPATQVKNRSECFALMNVSENVRWKNLKVNFDNV
GLGYLSLLQVATFKGWMDIMYAAVDSVNVNEQPKYEHSLYMYIYFVIFIIFGSFFTLNLF
IGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGCIFDIV
TNQAFDITIMVLICLNMVTMMVEKEDQSDEMTNVLYWINVVFITLFTGECVLKLISLRHY
YFTVGWNIFDFVVVILSFVGMFLAGLIKKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT
LLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFNFETFGNSMICLF
QITTSAGWDGLLAPILNSEPPDCDPKKVHLGSSVEGDCGNPSVGIFYFVSYIIISFLVVV
NMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEYSKLSDFAAALDPP
LLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGEGGEMDSLRSQMEERFMSANP
SKVSYEPITTTLKRKQEDVSAIVIQRAYRRYCLQKNVKNISSVYIKDGDRDEDFPSKEDM
VLDNVNKNSSLENTDATPSTISPPSYDSVTKPDREKYEKDRTEKEDKGKDGKERKK
NT seq
5931 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgttgcctcccccaggacctcagagttttgtccacttcaccgaacagtccctt
gccctcattgaacaacgcattgctgagggaaaaacaaaggagcccaaagaagaaaagaaa
gacagtgatgacgaaggtccaaagccaagcagtgacctggaggccggcaaacagctgccc
ttcatctatggagacattccccggggcatggtgtcggagcccctgcaggacctggatccg
tactacgcagacaaaaaaactttcatagtattgaacaaagggaaagcgatcttccgtttc
aatgccacccctgctttgtacatgatatctccgttcaatcctctaagaagattatctatt
aagattctagtgcactccttgttcagcatgttgatcatgtgcactattctgaccaactgc
atatttatgacaatgagtaaccctccagaatggaccaaaaatgtagagtacactttcact
ggaatatatacttttgaatcacttgtaaaaatccttgcgagaggcttttgtataggagaa
ttcactttccttcgtgatccgtggaactggctggatttcatcgtcattgtttttgcatat
gtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcagagttctccga
gcattgaaaacaatttcagtcattccaggcctgaagaccattgtgggggcgctgatccag
tcggtgaagaagctctctgacgtcatgatcctgaccgtgttctgtctgagcgtgttcgca
ttaataggactccagttgttcatgggcaacctgaagcataaatgttttcggaatacaact
gaaaataataatgaaactttacaaaacataatgaatactgttgaggatgaagaagaattt
agaaagtatttttattacttggaaggatccaaagatgctctcctttgtggtttcagcaca
gattcaggtcagtgtccagaggggtacacctgtgtgaaagcagggcgaaaccccgattat
ggctacacgagcttcgacaccttcagctgggccttcctagccttgtttcggctaatgacc
caggattactgggaaaacctttaccaacagacactgcgtgctgctggcaagacctacatg
atcttctttgttgtggtgattttcctgggctccttttatctaatcaacttgatcctggct
gtggttgccatggcctatgaagaacaaaatcaagcaaacatcgaagaagctaaacagaaa
gagctagaatttcagcagatgttagacttacttaaaaaagagcaggaagaagccgaggca
atagcagcagcagcagctgaatacacaagtattgggagaagcagaattatgggcctctct
gagagttcttctgaaacatccaaactgagctctaagagtgctaaagaaagaagaaacaga
cgaaagaaaaagaatcaaaagaagctctccagtggggaagaaaagggagatgatgagaaa
ttgtccaaatcggaatcagaggagaacgttaggagaaaaagtttccttggtgttgaaggg
tatagacaagcacgtgaaaagagattgtctacccctaatcagtcaccactcagcattcgt
ggctccttgttttctgcaagacgaagcagcagaacaagtctttttagtttcaagggtcga
ggaaaagatctaggatctgagactgaattcgctgacgacgaacacagcatctttggagac
aatgagagcagaaggggctcactgtttgtgcctcaccgacccccggagcggcgcagcagt
aacatcagccaagccagtaggtcccccccactgctgccggtgaacgggaagaagcacagt
gctgtggactgcaatggtgtggtctccctggttgatggaccctcagccctcatgctcccc
aatggacagcttctgccagagggcacaaccaatcaaatccataaaaaaagacgccccagt
tcttatctcctttcagaagacatgctgaatgacccttgtctcagacaaagagcaatgagt
cgggcaagcatattaaccaacactgtggaagaacttgaagagtcccgacaaaaatgtcca
ccgtggtggtacagatttgcacacaccttcttaatctggaattgctctccatattggata
aaattcaaaaagtttatccattttattgtcatggatccttttgtagatcttgcaattacc
atttgcatagttttaaacacactgtttatggctatggagcaccacccaatgacgaaagaa
ttcgaaaatgtcctggctgtgggaaatctggtctttactggaatttttgcagctgaaatg
gttttaaaactaattgccatggatccctatgagtatttccaagtaggctggaatattttt
gacagccttattgtgactttaagtttagtggagttttttctgtcagatgtggaaggattg
tccgttctgcgatcattcagactgctccgagtcttcaagttggcaaaatcttggccaaca
ctgaacatgctgataaagatcattggtaactcagtgggggctctgggaaacctcacgctg
gtgttggccatcatcgtctttatttttgccgtggtcggcatgcagctctttggtaagagc
tacaaagaatgtgtctgcaagatcaatgatgactgcacgctcccgcgctggcacatgaat
gacttcttccactccttcctgattgtgttccgtgtgctgtgtggagagtggatagagacc
atgtgggactgcatggaggtcgctggccaagccatgtgcctaattgtttacatgatggtc
atggtcattggaaacctagtggtcctgaacttatttctggctttattattgagctcattt
agttcagacaatcttacagcaattgaggaagaccctgatgctaacaacctccagattgcc
gtgaacagaattcaaaagggaataaattatacgaaacaaactttacgcgaatttgttcta
aaagcattttccaaaaagccaaagatttccagggagataagacaaggagaagatctaaat
actaagaaacaaaactatatttctaaccatacacttgctgaaatgagcaaagatcacaat
ttccacaaggaaaaagataaaatcggtggatttggaagcagcatggataaatacttgatg
gaggaaagtacttgtcaatcattcattcacaaccccagcctcacagtaacggtgccaatt
gcacttggggaatctgatttggaaaatatgaatactgaggaacttagcagtgattcggag
agtgaatacagcaaagagagattgaaccgatcgagttcctccgagtgcagtacagttgat
aatcctctgccaggagaagaagaagcagaggctgaacatgtgaattcagatgagccagag
gcctgttttacagagggttgtgtacggaggttcccctgctgccaagttaacatagagtcg
ggaaaaggaaaaatctggtggaatatcaggaaaacctgctaccggatagttgaacacagc
tggtttgaaagctttattgttctcatgatcctgctcagtagtggtgctctggctttcgaa
gatatatatatagaaaggaaaaagaccattaagattatcctggaatatgctgacaagata
ttcacttacatcttcattctggaattgcttctaaaatgggtagcatatggttacaaaacg
tatttcaccaatgcctggtgttggctggatttcttaattgttgatgtttctttggttact
ttagtcgcaaatgctcttggctactcggatcttggccccattaaatcccttcggaccctt
agagcgttaagacctctgagagccttatctaggtttgaagggatgagggtggttgtgaat
gcactcataggagcaattccttccatcatgaatgtcctacttgtgtgtcttatattctgg
ctaatatttagcatcatgggggtaaacctatttgctggcaagttctacgaatgtgttaac
accacaaatgggtcacggtttcctgcaactcaagttaaaaatcgctccgagtgtttcgcc
cttatgaatgttagtgaaaatgtgagatggaaaaacttgaaagtgaactttgacaatgtc
ggactgggttacctatctctgcttcaagttgccacgtttaagggatggatggacattatg
tatgcggcagttgattctgttaatgtaaatgagcagcctaaatatgaacacagcctctac
atgtatatttattttgtcatctttatcatttttgggtcattcttcactttgaatttgttc
attggtgtcatcatagataatttcaaccaacagaaaaagaagcttggaggtcaagacatc
tttatgacagaagaacagaagaaatactataatgcaatgaaaaagttggggtccaagaaa
ccacaaaagccaattcctcggccagggaacaaattccaaggatgtatatttgatatagta
acaaatcaagctttcgatatcactatcatggttcttatctgcctcaatatggtaaccatg
atggttgaaaaggaggatcaaagtgatgaaatgactaatgttttatactggataaatgtg
gtttttatcacccttttcactggagaatgtgtgctcaaactgatctcccttagacactac
tacttcactgtaggatggaatatttttgattttgtggttgtgattctctcttttgtgggt
atgtttcttgccgggctgataaaaaaatattttgtgtcccccaccctgttccgtgtgatc
cgtcttgccaggattggccgaatcctccgtctgatcaaaggagcaaaggggatccgcacg
ctgctctttgctttgatgatgtcgctccctgccctgttcaacatcggcctcctgctcttc
ctggtcatgttcatctacgccatctttggaatgtccaactttgcctatgttaagaaggaa
gctggaattaatgacatgttcaattttgaaacctttggcaacagcatgatctgccttttt
caaattaccacctctgctggttgggatggattgctagcccctattctcaacagcgagcca
cctgactgtgacccaaaaaaggttcatcttggaagctcagttgaaggagactgcgggaac
ccatctgttgggatcttctattttgtcagttacatcatcatatcttttctagttgtggtg
aacatgtacatcgcggtcatcctggagaacttcagtgttgctactgaagaaagtactgag
cctttgagtgaggatgactttgagatgttctacgaggtctgggagaagtttgatcctgat
gcaactcaatttatagaatatagcaaactgtctgactttgcagctgctctggatcctcct
cttctcatagcaaaaccaaacaaagtccagctcattgccatggatctacccatggttagt
ggcgaccggatccactgtcttgacatcttatttgctttcacaaagcgtgttttgggtgaa
ggtggagaaatggattctcttcgttcacagatggaagaaaggttcatgtctgcaaatcct
tctaaagtgtcctatgaacccatcacaactacgctaaaacgaaaacaagaggatgtgtct
gctattgtcattcagcgggcttacagacgttattgcttacagaaaaatgtcaaaaatata
tcaagtgtatacataaaagatggagacagagatgaggattttcctagtaaagaagatatg
gtgttagataatgttaataagaactcgagtctggaaaacacagatgcaactccttccacc
atctcccctccttcatacgatagtgtaacaaagccagacagagagaaatatgagaaagac
agaacagaaaaggaagacaaaggaaaagatggcaaggaaagaaaaaagtag
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integrated database retrieval system
