Otolemur garnettii (small-eared galago): 100961156
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Entry
100961156 CDS
T07855
Symbol
PTCH1
Name
(RefSeq) protein patched homolog 1 isoform X2
KO
K06225
patched 1
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga04024
cAMP signaling pathway
oga04340
Hedgehog signaling pathway
oga04360
Axon guidance
oga05200
Pathways in cancer
oga05205
Proteoglycans in cancer
oga05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100961156 (PTCH1)
04024 cAMP signaling pathway
100961156 (PTCH1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100961156 (PTCH1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100961156 (PTCH1)
05205 Proteoglycans in cancer
100961156 (PTCH1)
09162 Cancer: specific types
05217 Basal cell carcinoma
100961156 (PTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
100961156
NCBI-ProteinID:
XP_003783049
Ensembl:
ENSOGAG00000003103
LinkDB
All DBs
Position
Unknown
AA seq
1448 aa
AA seq
DB search
MELLNRNRLVIVSPRCTLPKASGGPARRGFYTFRSFCKDGGGEDDDEDEEEKDDDREDKE
THSDKGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANLE
TNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLDSA
LQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQ
SGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADP
DCPVTAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHALQT
MFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVLSF
TTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVA
AGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLK
RTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYR
REDRRLDIFCCFTSPCVSRVIQVEPQAYTETHENTRYSPPPPYSSHSFAHETQITMQSTV
QLRTEYDPHTHVYYTTAEPRSEISVQPVTVAQDTLSCQSPESTSSTRDLLSQFSDSSLHC
LEPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVP
RETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHKSFSNVKYVMLEENKQLPK
MWLHYFRDWLQGLQDAFDNDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSGDKPIDISQL
TKQRLVDADGIINPSAFYVYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLR
IPAAEPIEYAQFPFYLNGLRDTADFVEAIEKVRTICNNYTSLGLSSYPNGYPFLFWEQYI
GLRHWLLLSISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVP
VVILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAG
SEFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPANGLNRLPTPSPEPPP
SVVRFAVPPGHVNNGSDSSDSEYSSQTTVSGISEELRHYEAQQSTGGPTHQVIVEATENP
VFARSSVVHPESRHHPPSNPRQQPHLDSGSLPPGRQSQQPRRDPPREGLRPPPYRPRRDA
FEISTEGHSGPSNRDRMGPRAARSHNARSPASTAMGSSLPGYCQPITTVTASASVTVAVH
PPPVPGPGRNPRGGLCPGYEGYPETDHGLFEDPHVPFHVRCERRDSKVEVIELQDVECEE
SSRRSSAN
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcttaatagaaacaggcttgtaattgtgagtccgcgctgcactctgccgaaa
gcctccggcggcccagcgcgccggggtttttacactttccgttccttttgtaaagacgga
ggaggagaagacgacgacgaagacgaagaagaaaaagacgacgacagggaagacaaagag
actcacagcgacaaggggaaggctactggccggaaagcgccgctgtggctgagagcgaag
tttcagagactcttatttaaactgggttgttacattcaaaaaaactgcggcaagttcttg
gttgttggcctcctcatatttggggccttcgctgtgggattaaaggcagctaatctcgag
accaacgtggaggagctgtgggtggaagttggtggacgagtaagtcgtgaattaaattat
actcgccagaagattggagaagaggctatgtttaatcctcaactcatgatacagacccca
aaagaagaaggtgctaatgtcctgaccacagaagcgctcctgcagcatctggactcggcc
ctccaggccagccgagtccacgtgtatatgtacaacaggcagtggaaattggaacatttg
tgttacaaatcaggagaacttatcacagaaacgggttacatggatcagataatagaatat
ctttacccttgtttaattattacacctttggactgcttctgggaaggagcgaagttacaa
tccgggacagcatacctcctaggtaaacctcctttgcggtggacaaactttgaccctctg
gaattcctagaagagttaaagaaaataaactatcaagtggacagctgggaggaaatgcta
aataaagctgaagttggtcacggttatatggaccgtccctgcctcaacccagccgatcca
gactgccctgttacagcccccaacaaaaattcaaccaaacctcttgatatggcccttgtt
ttgaatggtggatgtcacggattatccagaaagtatatgcactggcaggaggaactgatt
gtgggtggcacagtcaagaacagcacgggaaaactggtcagtgcccacgctctgcagacc
atgttccagttgatgactcccaagcagatgtacgagcacttcaaggggtacgagtatgtc
tcacacataaactggaacgaggacaaggcagcagccatcctggaggcttggcagaggacg
tacgtggaggtggttcatcaaagcgtggcacagaactccactcagaaggtgctttccttc
accacaacgaccttggacgacatcctaaaatccttctctgatgtcagcgtcatacgagta
gctagtggctacttactgatgcttgcctatgcctgcttaaccatgctgcgctgggactgt
tccaagtcccagggtgccgtggggctggctggtgtcctgttggttgcactgtcagtggct
gcaggattgggcctgtgctccttgatcgggatttcctttaatgctgcaacaactcaggtt
ttgccatttctcgctcttggcgtcggtgtggatgatgttttcctcctggcccatgccttt
agtgaaacaggacagaataaaagaatccctttcgaggacaggactggagagtgcctcaag
cgcacaggagccagtgtggccctcacatccatcagcaatgtcacagctttcttcatggca
gcgttaatccctattcccgctctgcgggcattctccctccaggcggccgtcgttgtggtg
ttcaattttgccatggttctgctaatttttcctgcaattctcagcatggatttatatcga
cgggaggacaggagattggatattttctgctgttttacaagcccctgtgtcagcagagtg
attcaggttgaacctcaggcctacacagagacccacgagaacacccgatacagcccccca
cctccctacagcagccacagctttgctcacgaaacgcagatcaccatgcagtccaccgtc
cagctccgcacggagtacgacccccacacgcatgtgtactataccaccgctgagccacgc
tcggagatctctgtgcagcctgtcaccgtggcccaggacaccctcagctgccagagccct
gagagcaccagctccacaagggacctgctctcccagttctctgactccagcctccactgc
ctcgagcccccctgcaccaagtggactctctcgtcttttgctgagaagcactacgctccc
tttctcttgaaaccaaaagccaaggttgtggtgatcttccttttcttgggcttgctgggg
gtcagcctttacgggaccacccgagtgagagacgggctggatcttacagacatcgtacct
cgggaaaccagagaatatgactttattgctgcacaattcaaatacttttctttctacaac
atgtacatagtcacccagaaagcagactacccgaacatccagcacttactttacgacctt
cacaagagtttcagtaatgtgaagtatgtcatgttagaagaaaacaaacagcttcccaaa
atgtggctgcactacttccgagactggctccaaggactccaggatgcatttgacaatgac
tgggaaactgggaaaatcatgccaaacaattacaagaatggatcggacgacggggtcctt
gcctacaaactgctggtgcagaccggcagtggcgataaacccatcgacatcagtcagttg
actaaacagcgtctggtggatgcagatggcatcattaatcccagcgctttctacgtctac
ctgacagcgtgggtcagcaatgaccccgtggcttacgctgcctcccaggccaacatccgg
cctcaccgacctgaatgggtccatgacaaagctgactacatgccagaaacaaggctgaga
atcccagcagcagagcccatcgagtatgctcagttcccgttctacctcaatggcttacga
gacactgcagactttgtggaagcaattgaaaaagtaagaaccatctgcaacaactacacg
agcctggggctctccagctaccccaacggctaccccttcctcttctgggagcagtacatc
ggcctccgccactggctgctgctgtccatcagtgtggtgttggcctgcacgtttctcgtg
tgcgccgtcttccttctgaacccctggacggccgggatcattgtgatggtcctggccttg
atgacagtcgagctcttcggcatgatgggccttattggaatcaagctgagtgcagtgcct
gtggtcatcctgatcgcctctgttggcatcggcgtggaattcaccgttcacgtcgctttg
gcctttctaacagccattggtgataagaaccgcagggctgtgcttgccctagagcacatg
tttgctcctgttctggatggtgctgtgtccactctgctgggcgtgctgatgttagcagga
tctgagtttgacttcattgtcaggtatttctttgctgtcctggcaatcctaacaatcctg
ggtgttctcaatggactggttttgcttccagttcttttgtctttctttggaccatatcct
gaggtgtctccagccaatggcctaaaccgactgcccactccttccccggagccacccccc
agcgttgtccggtttgcagtgcctcctggtcacgtgaacaatgggtctgattcctctgat
tcggagtacagctcccaaacgacagtgtctggcatcagcgaagagctccggcactacgag
gctcagcagagcacggggggcccgacccaccaagtcattgtggaggccacggaaaaccct
gtcttcgcccgttcctctgtggtccatcctgaatccaggcatcacccaccctccaatcct
cgacagcagccccacctggactctgggtccctgcctccaggacggcaaagccagcagccc
cgtagggaccctcccagagaaggcttgcggccacctccctatagaccgcgcagagacgct
tttgaaatttctactgaagggcattctggccctagcaatagggaccgcatgggcccccgt
gcggcccgttctcacaatgctcggagcccagcatccactgccatgggcagctccctgcct
ggctactgccagcccatcaccactgtgaccgcttctgcttccgtgactgttgcggtgcac
cctccgcctgtgcccgggcctgggcggaacccccgagggggactctgcccgggctacgag
ggctaccctgagactgaccacgggctgttcgaggacccccacgtgccttttcatgtccgg
tgcgagaggagggattcaaaggtggaagtcatcgagctgcaggacgtggaatgtgaggaa
agttcccggagaagcagtgccaactga
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integrated database retrieval system
