Otolemur garnettii (small-eared galago): 100961218
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Entry
100961218 CDS
T07855
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
100961218 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oga01009
]
100961218 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oga04515
]
100961218 (PCDH9)
Protein phosphatases and associated proteins [BR:
oga01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100961218 (PCDH9)
Cell adhesion molecules [BR:
oga04515
]
Cadherins
Protocadherins
100961218 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RCR
Big_9
V_ATPase_I
EphA2_TM
MAP17
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
100961218
NCBI-ProteinID:
XP_003790209
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQCNSHNKSD
NIPVTPQKCPSSAGFHMQENEESHYESQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLI
SHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSD
NCWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLVNGHTLTRAWKEDSNRNQFNDRKQYGA
NEGHFNNGSHMTDIPLANLKSYKQAGGAIESPKEHQL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattcc
gcaatagctcaagaacttatatacactattagagaggaattgcctgaaaatgtgcccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacagggaccagtgcc
agccttgtctacagactggtttctaaagctggggatgcccctttggtgaaagtatccagc
agcactggagaaattttcacaacctccaacagaatagacagagaaaaactctgtgctgga
gcctcttatgctgaggagaatgagtgtttctttgaacttgaggtcgtgatcctccccaat
gactttttcaggctgatcaaaataaaaataattgtcaaggataccaatgataatgccccc
atgtttccatctcctgtcatcaatatttccattccagaaaacactttgatcaacagtcgc
tttccaattccgtcagcaacagatcctgacacaggcttcaatggtgtacagcattatgaa
ttgttaaatgggcaaagtgtttttggactggatatcgtggaaactccggagggagagaag
tggccacaattgattgttcagcaaaacttggatagagaacagaaagatacctatgtgatg
aaaatcaaagtggaggatggaggcactccacagaaatccagcacggccatactgcaggtc
acagtaagtgatgtaaatgacaacaggccagtgtttaaagagggtcaagtggaggtgcat
attccagagaacgctcctgtaggtacctctgtaattcagctccatgccactgatgcagac
ataggcagtaatgctgaaatccggtacatttttggtgcccaggttgcccctgcaaccaaa
agactctttgctttaaataatacaactgggctgattacagttcagaggtccttagataga
gaggagacagccattcacaaagtgacagtgctggctagtgatggcagttctactcctgct
cgagcaacggttaccatcaatgtcaccgatgtaaatgataaccctcctaacatagacctc
aggtacattataagtcccatcaatggcactgtgtatttatctgagaaagatcctgtcaat
actaagattgctctaattacggtttcagataaggacacagatgtgaatggcaaagtgatc
tgttttattgaaagagaggtcccatttcatttgaaagcagtatatgacaaccaatatttg
ttagagacctcctctttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcctctgattctgggaagcccagtttaaatcagactgccctggtaagggttaagcttgag
gatgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtgggttatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggacccaatgcctccttctttgatctggaccgaaag
acaggagttttgacagcttccagagtgtttgacagagaagaacaagaacggttcattttt
acagtaactgccagggacaatggaacccctcccctccaaagccaagcggctgtgatcgtt
actgttctggatgagaatgacaatagccccaagtttactcataatcattttcaatttttt
gtgtctgagaatctgccaaagtatagtactgtgggagtgatcacagtgacagatgcagat
gctggagagaataaagctgtgactctttccattctcaatgacaatgataattttgtgttg
gatccctattctggagtcataaagtcaaatgtctcatttgatagagaacagcagagttcc
tacacttttgatgtcaaagccactgacggaggacaaccaccacgttcctctactgcaaaa
gtcaccatcaatgtcatggatgtcaatgacaacagcccggttgtcatttctccaccttct
aacacttcctttaagttggtgcccttgtcagccattccaggctccgtggtagcagaagtt
tttgcagtggatatagacactggaatgaatgcagaactcaagtacacaatagtcagtgga
aacaacaaaggcttatttcggattgatccagtaacaggtaacattactctggaagaaaaa
ccagcacctactgacgttggcttgcaccgtttggtggtcaacataagtgacctggggtac
cctaagtctctgcacaccctcgtgcttgtatttctttatgtcaatgacactgctggcaac
gcctcctacatctacgacttgatccgcaggactatggagaccccgttggacaggaacata
ggggatagtagccagccctatcagaatgaggactatctcaccatcatgatcgccatcgtc
gccggcgccatggtagtcatagttgtgatctttgtcaccgttctggtgcgctgtcgccat
gcgtcaaggttcaaagcggctcagaggagcaagcagggtgccgaatggatgtccccaaac
caagagaacaaacaaaataagaaaaagaaaaggaagaaaagaaagtctcccaagagctct
cttttgaactttgtcactattgaagagtccaaacccgatgacgcggtgcacgagcctatc
aatgggacgatcagcctgccggccgagctggaggagcagagcatagggagatttgactgg
ggcccagcaccgccaaccaccttcaagcctaacagccctgacctggccaagcactacaaa
tctgcttctccacagcctgctttccatctcaaaccagacactccagtttccgtgaaaaag
catcacgtgattcaggagctcccgttggacaacacctttgtcgggggttgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtgtaactcacacaacaaaagtgac
aatattcctgtcactcctcagaaatgtcccagctctgcgggtttccacatgcaggagaat
gaagaaagccattacgagtcgcagcgccgtgttacgtttcacctccctgatggctcccag
gaaagctgcagtgacagtggtctaggagaccacgagccggtgggtagtggaaccctgatc
tcacaccctcttcctctggttcagccacaggacgaattctatgaccaggcttctccggac
aagaggaccgaagcagatggcaactctgaccccaactctgatgggcctttaggtccccga
ggattagctgaagctacagagatgtgcactcaagagtgcttggttttgggtcactctgat
aactgctggatgcctcctggcttaggtccatatcaacaccccaaatctcctctctcaacc
tttgcaccccagaaagaatgggtgaagaaggacaagcttgtgaatgggcacaccctgacc
agagcctggaaagaagacagcaacaggaaccagttcaatgaccgtaagcagtatggcgcc
aacgaaggccatttcaacaatggcagccacatgacagacattcctctggcgaatctgaag
tcttataagcaagcaggaggtgctattgagagtcctaaagagcaccaactctaa
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integrated database retrieval system
