Otolemur garnettii (small-eared galago): 100961425
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Entry
100961425 CDS
T07855
Symbol
COL11A2
Name
(RefSeq) collagen alpha-2(XI) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga04820
Cytoskeleton in muscle cells
oga04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100961425 (COL11A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100961425 (COL11A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oga00536
]
100961425 (COL11A2)
Glycosaminoglycan binding proteins [BR:
oga00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100961425 (COL11A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
100961425
NCBI-ProteinID:
XP_003789125
Ensembl:
ENSOGAG00000025975
UniProt:
H0XPR5
LinkDB
All DBs
Position
Unknown
AA seq
1736 aa
AA seq
DB search
MEWCSRCRRLLLLLPLVLELSGAPGWAGAPPVDVLRALRFPSIPDGVRRTKGICPADVAY
RVSRPAQLSAPTRQFFPGGFPKDFSLLTVFRTRPGLQAPLLTLYSAQGVRQLGLELGRPV
RFLYEDQTGRPQPPAQPVFRGLSLADGKWHRVAVAVKGQSVTLIIDCKKRVTRPLPRSAR
PVLDTHGVIIFGARILDEEVFEGDIQELVIVPGVQAAYESCEPKELECDGGQRERSQNQQ
PHRTQRSPKQQPSRLHRPQNQEPQRQPIESLYYDYEPPYYDVMTTGTTPDYQDPTPGEEE
EILASSPLPPPEEEQTDLQVPLTANRFQAEDYGEGGTDPPAGPYDYTYGYGDDYREETEL
GPALSAETAHSGAAVHGPRGLKGEKGEPAVLEPGMLVEGPPGPEGPAGLIGPPGIQGNPG
PVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQ
ARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLAGPPGKAGRRGRA
GADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPR
GLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLP
GPQGAIGPHGEKGPRGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPR
GVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEIGVPGSRGEDGPEGPKGRTGPT
GDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKPGPRGER
GPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPAGKD
GLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLTGTA
GKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPAGPPGPAGSPGER
GAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVA
GEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAK
GDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPP
GGVGNLGPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGESGQPGEAGPPGPKGPTGDD
GPKGNPGPVGFPGDPGPPGESGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKR
GPAGAPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRP
GATGQAGPPGPMGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSP
GQKGETGIPGASGPIGPGGPPGLPGPAGPKGAKGATGPAGPKGEKGIQGPPGHPGPPGEV
IQPLPIQMPKKTRRSVDGSRLMQEDEAVPTRGAPGSPGGLEEIFGSLDSLREEIEQMRRP
TGTQDSPARTCQDLKLCHPELPDGEYWVDPNQGCARDAFRVFCNFTAGGETCVTPRDDVT
QFSYVDSEGSLVGVVQLTFLRLLSVSAHQDVSYPCSGAARDGPLRLRGANEDELSPETSP
YVKEFRDGCQTQQGRTVLEVRTPVLEQLPVLDASFSDLGAPPRRGGVLLGPVCFMG
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggagtggtgcagccgctgccgtcgcctcctcctgctcctacctctggtgctggagctg
agcggggccccgggctgggcgggtgcaccccctgtggatgtgctccgggccctgaggttc
ccctccatccccgatggtgtccggaggacaaaaggcatctgtccagctgatgtggcttac
cgagtgtcacgacctgctcagctcagtgcacccacccgccagtttttcccaggaggcttt
cccaaagatttctctctgctgactgttttccggacccggcctggtctccaggctcccctc
ctgactctctacagtgctcagggtgtacgacagctgggcctagagcttggccggcctgtc
cgcttcctgtatgaggaccagactggacggcctcaacctccagctcagccagttttccga
ggcctcagcctagcagatggcaagtggcaccgtgtagctgtggctgtgaagggccaatct
gtcactcttattattgactgcaagaagcgagtaacccggccactgccccgaagtgctcgt
ccagtgttggacactcatggagtgataatctttggtgcccgcatcctggatgaagaagtc
tttgagggtgatatccaggagcttgtcattgttccgggggtccaagctgcctatgaatcc
tgcgaaccgaaggagctggagtgtgatgggggccagagagaaagatctcagaaccaacag
cctcacagaacccagagatcaccaaaacagcaaccatcgagacttcataggccacaaaac
caagaaccacagcgacagcccattgagtctctctactatgactacgagcccccctattac
gatgtgatgactacggggacaacccctgattatcaggaccccaccccaggtgaagaggaa
gaaatcctggcgtccagccccttgccaccccctgaggaggagcagacagatctccaggtc
cccctgacagccaacaggttccaggcagaggactatggggagggtggcacagacccccca
gcagggccctacgattacacctatggctatggggacgattatcgtgaggagacggagctt
ggccctgccctctctgcggagacagcccactcaggagccgctgtccatggaccccggggg
ctgaagggagagaagggggagcctgcagtactggaacctggtatgcttgtggaggggccc
cccggcccagaaggccctgcgggattgattggtcctcctggcatccaagggaacccaggg
ccagttggagaccctggcgagaggggtcccccaggccgagcagggctccctggatcagat
ggggcccctggccctcctggcacgtctctcatgctcccattccggtttggcagtggtggg
ggtgacaagggccctgttgtggcagctcaggaggctcaggcccaggcaatcctgcagcag
gcgcggctggcactccgtggaccacctggccccatgggatacacaggtcgccctggaccc
ttgggacaacctggaagccctggcctgaaaggagaatctggagacctgggccctcagggg
cccagaggacctcagggccttgcaggccctcctggcaaagctgggcgaaggggcagagca
ggtgctgatggagcccgagggatgcctggagaacctggagtgaagggtgaccgaggtttt
gatggactcccagggctacctggggagaagggacacagaggggatactggtgcccagggc
cttccagggccccctggtgaggatggagagcggggagatgatggagagattgggccccgt
gggctgcctggagagtcaggtcctcgaggtctccttggccccaaaggcccacctggtatt
cctggacccccaggtgtccgaggcatggatggtccccaaggccccaaagggagcttggga
ccccaaggagagccaggacctcctggacaacagggcacccctgggacccagggtctccca
gggccccagggtgccatcggtcctcatggagagaagggtcctcgagggaaaccagggctc
cctggcatgcctggctcagatggacccccgggtcatcccgggaaggaaggtcctcctgga
accaagggaaaccagggtccatctggacctcagggtcctctaggatacccaggacctcga
ggtgtcaagggtgtggatggaattcggggtctaaagggtcataagggtgagaagggtgag
gatggctttcctgggttcaaaggtgacataggcgtgaaaggtgacaggggtgagattgga
gttcctggatctaggggagaagatggtcctgaggggccaaagggacgcactggacccact
ggagaccctgggcccccggggctcatgggtgagaagggcaagctgggtgttcctggtctg
cctggctaccctggacgccaaggtcctaaggggtccctgggatttcctggctttcctgga
gccagtggagagaaaggagcccggggcctgtcagggaaaccagggcctcgaggagaacgg
ggccccacgggtccacggggtcagcgaggaccccgaggtgccacaggaaagtctggagct
aagggaacatctggtggtgatggaccccatggaccccctggagaaaggggtctccccgga
cctcagggtcccaatggatttcctggccccaaaggacccccgggccccgctgggaaggat
gggcttccgggacacccgggccaaagaggagaagtgggtttccaagggaagactggcccc
cctggtcccccaggagtggtgggacctcagggagctgcaggagaaactggccctatgggg
gagagaggtcacccgggccccccaggaccccctggagagcagggactgactgggacagct
ggaaaagaaggaacgaagggtgaccctggtccccctggggccccagggaaggatgggcct
gctggtctgaggggcttcccaggggagagaggcctgccaggcactgctggtggacctggt
ttgaaggggaatgaaggtccggctgggccccctggccctgcaggctcccctggggagcga
ggtgcagcgggatcagggggacccattggacccccagggcgcccaggcccacagggtccc
cctggagcagctggagagaaaggagtccctggtgagaagggccctattggtccaactggc
cgtgatggggtacagggtcctgtgggacttcctggtcctgctgggcccccaggtgtggcc
ggagaggatggagacaagggtgaagtgggggaccctggacagaagggcaccaaagggaac
aagggagaacatggtcctcctggaccccctggacccattggtcctgtgggacaacctgga
gcagcgggagcagatggggagcccggagctcggggcccccagggacactttggagccaaa
ggtgatgaaggaacaagaggattcaatgggcctccaggacccattggcctacagggtttg
ccaggcccctctggggagaagggagaaacaggagatgtgggtcctatgggaccacctggc
cccccaggacctcgaggcccagctggacccaatggtgctgatggcccacaaggtcctcct
ggaggtgttgggaacctgggtccccctggagagaagggggagccaggagagtcaggatct
ccaggggtccagggggagccaggtgtcaaaggtcctcgtggggagcgcggtgaaaaagga
gagtcaggacagccaggagaggcgggaccaccagggcctaaaggccccacgggcgacgat
ggccctaaagggaaccctggtcctgttggttttcctggtgaccctggaccccctggagaa
agtggccctcggggccaggatggtgctaagggtgatcgtggagaggatggtgaaccagga
cagcctggatcccctggtcctactggggagaatggaccccctgggccacttggaaagcgg
ggtcctgctggtgcaccaggtccagaggggcgacaaggagagaaaggagcaaagggagac
cctggtgctgtgggtgccccagggaagacaggccctgtgggtcctgcaggcccagcaggg
aaacctggccctgatggtctgagggggcttccgggctcagtgggtcagcaaggccgtcct
ggagccacagggcaggctggacccccaggtcctatgggacctccagggcttcctggtctc
cggggcgatgctggagccaagggagagaagggtcacccaggtctcataggactgattgga
cctccaggggagcagggagagaagggagatcggggacttcctggccctcagggctcccct
gggcagaagggggagacgggtatcccaggggcatcaggccccattggccctggagggccc
cctggcctccctggaccagctggccccaaaggagccaaaggagccacaggcccagctgga
cccaaaggagagaagggcatccagggtcctccaggacacccgggccccccaggcgaggtg
atccagccactgcccatccagatgcctaagaagacgagacgctctgtggatggaagtcgc
ctgatgcaggaagatgaggccgtgccaaccaggggggccccaggcagtcctggaggtctg
gaggagatctttggctcactggactcccttcgggaggagattgaacagatgaggcggcca
acaggaacccaggacagccctgctcgcacctgccaggacctgaagctatgccacccggag
ctgcctgatggagagtactgggttgatcccaaccagggctgtgctcgggatgccttccgg
gtattctgcaacttcacagcaggaggggaaacctgtgtaactcccagggatgatgtcaca
cagttctcttatgtggattcagagggctccctggtgggtgtggtccagctcaccttcctg
agactgctcagtgtctcagcacaccaggatgtctcctacccatgctctggagcagctcgt
gatggtcccctgagactccggggagccaatgaggatgagctgagcccagaaaccagcccc
tatgtcaaggaattcagagatggctgccagacacagcaaggccgaacggtgctggaggtg
cggacacctgtgttggagcagctgccagtgctagatgcctccttctcagacctgggggcc
cccccaaggcggggaggagtgctgcttgggcctgtctgcttcatgggctag
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integrated database retrieval system
