KEGG   Otolemur garnettii (small-eared galago): 100961565
Entry
100961565         CDS       T07855                                 
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
oga  Otolemur garnettii (small-eared galago)
Pathway
oga03082  ATP-dependent chromatin remodeling
oga04714  Thermogenesis
oga05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:oga00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100961565 (SMARCA4)
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    100961565 (SMARCA4)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    100961565 (SMARCA4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oga03021]
    100961565 (SMARCA4)
   03036 Chromosome and associated proteins [BR:oga03036]
    100961565 (SMARCA4)
Transcription machinery [BR:oga03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     100961565 (SMARCA4)
Chromosome and associated proteins [BR:oga03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     100961565 (SMARCA4)
  Chromatin remodeling factors
   BAF complex
    100961565 (SMARCA4)
   PBAF complex
    100961565 (SMARCA4)
   GBAF(ncBAF) complex
    100961565 (SMARCA4)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C SnAC Bromodomain HSA BRK QLQ ResIII HDA2-3 DEAD DUF2009 Htt_C-HEAT
Other DBs
NCBI-GeneID: 100961565
NCBI-ProteinID: XP_012665589
Ensembl: ENSOGAG00000016148
LinkDB
Position
Unknown
AA seq 1590 aa
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPSQG
PGGYPQDNMHQMHKPLESMHEKGMPDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGTDPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPALPPPSVSTTGPGPGPGPGPGP
GPGPGPAPPNYSRPHGIGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTST
PQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKP
RGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQ
EVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNS
ILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGY
RKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPA
IGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSE
ESGSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEY
GVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILA
DEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSP
AARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLN
THYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNE
EETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLL
TDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRA
SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML
LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE
VRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE
RMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEV
DYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDES
KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEY
YELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVF
TSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPS
RGSRAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq 4773 nt   +upstreamnt  +downstreamnt
atgtccactccagacccacccctgggcggaactcctcggccaggaccttccccgggccca
ggtccctcacctggagccatgctgggccctagcccaggtccctcaccaggctctgcccac
agcatgatggggcccagccctgggccaccctcagcaggacaccctatcccatcccagggg
cctggagggtaccctcaggacaacatgcaccaaatgcacaagccattggagtcgatgcac
gagaagggcatgccggatgacccacgctacaatcagatgaaaggcatgggcatgaggtct
gggggccacgcaggcatggggcccccacccagccccatggaccagcactcccaaggttac
ccctcacccctaggtggctctgagcatgcctctagtccagttccagccagcggcccgtcc
tcgggcccccagatgtcatctgggccaggaggagcgccattggatggcaccgacccccag
gccttggggcagcaaaaccggggcccgaccccatttaaccagaaccagctgcaccagctc
agagctcagatcatggcctacaagatgctggccagggggcagccactccctgaccacctg
cagatggccgtgcaaggaaagcggccgatgcccgggatgcagcagcagatgccagcgcta
cctccaccctcagtgtccaccacgggacctggccctggccctggccccggcccgggcccc
ggccctggcccaggaccagcacctccaaattatagcaggcctcatggcatcggagggccc
aacatgcctccccctggaccctcaggcgtaccccccgggatgccaggtcagcccccggga
gggcctcccaagccctggcctgaaggacccatggcaaatgcagctgcccctaccagcacc
cctcagaagctgatccccccgcagcccacgggtcgcccttcacctgctccccctgctgtc
ccgcctgctgcctcacccgtgatgccaccccagacacagtctccagggcagccggcccag
cccgcccccatggtgccactgcaccagaagcagagtcgaatcacccccatccagaagcca
cggggccttgaccctgtagagatccttcaagagcgggagtacaggctgcaggctcgcatt
gcacaccgaattcaggaacttgaaaaccttcctgggtccctggctggggatttgcgaacc
aaagcaaccattgagctcaaggccctcaggctgctgaacttccagaggcagctgcgccag
gaggtggtggtttgcatgcggagggacacagcccttgagactgccctcaacgccaaggcc
tacaagcgcagcaagagacagtccctgcgcgaggcccgcatcactgagaagctggagaag
caacagaagatcgagcaggagcggaagcgcaggcaaaagcaccaggaatacctcaatagc
attctccagcatgccaaggatttcaaagaatatcaccgatcagtcacaggaaaaatccag
aagctcaccaaggctgtggccacatatcacgctaacacagagcgggaacagaagaaagaa
aatgaaagaattgagaaggagagaatgcggaggcttatggctgaagacgaggagggctac
cgcaagctcattgatcagaagaaggacaagcgcctggcctacctcttgcagcagacagac
gagtatgtggctaacctcactgagttggtgcggcagcacaaggccgcccaggttgccaag
gaaaagaagaagaaaaagaaaaagaagaaggcagaaaatgcagaaggacagacacctgcc
attgggcctgatggtgagcctctggatgagaccagccagatgagcgacctccccgtgaag
gtgatccacgtggagagtggcaagatcctgacaggcacagatgctccgaaagcagggcaa
ctggaggcttggcttgagatgaacccggggtatgaagttgcaccaagatctgatagtgaa
gaaagtggttcagaagaagaggaagaggaggaggaggaagagcagcctcagccagcgcag
cctcccaccctgcctgtggaggagaagaagaagattccagatccagatagtgacgatgtc
tctgaggtggacgcacggcatatcattgagaatgctaagcaagatgttgatgatgagtat
ggtgtgtcccaggcccttgcgcgtggccttcagtcatactacgctgtggcccatgctgtc
actgagagagtagacaagcagtcggcgcttatggtcaacggtgttcttaaacagtaccag
atcaaaggcttggagtggctagtgtccctgtacaacaacaacctaaatggaatcctggca
gacgagatgggcctgggcaagactatccagaccattgcactcatcacatacctcatggag
cacaagcgtatcaacgggcctttccttatcatcgtacctctctcaacactgtctaactgg
gcatatgaatttgacaagtgggccccttctgtggtgaaggtgtcctacaagggctccccg
gcagcaagacgggcttttgtcccacagctccggagtgggaagttcaatgttttgctgact
acatacgaatacatcattaaagacaagcacatccttgccaagattcgttggaagtacatg
attgtggatgagggccaccgcatgaagaaccaccactgcaagctgacacaggtgctcaac
actcactacgtggccccccgccgcctgctgctgacgggtacacccctacagaataagctc
cctgagctctgggcactgctcaacttcctgctgcccaccatcttcaagagctgcagcacc
tttgagcagtggttcaatgcaccctttgccatgactggtgaaaaggtggacctgaatgag
gaggagaccatcctcatcatccggcgtctccacaaagtgctgcggccctttctgctccgg
cggctcaagaaggaagttgaagcccagttgcccgaaaaggtggagtacgtcatcaagtgt
gacatgtctgctctgcagcgggtgctataccggcacatgcaggccaagggtgtgctgctg
accgatggctcagagaaggacaagaagggcaagggcggcaccaagacgctgatgaacacc
atcatgcagctgaggaagatctgcaaccatccgtacatgttccagcacattgaggagtcc
ttttccgagcacttgggcttcactggcggcatcgttcaaggactggacttgtacagagcc
tcgggtaaatttgagcttcttgatagaattcttcccaaactccgtgcaaccaaccacaaa
gtgctgctgttctgccagatgacctctctcatgacaatcatggaggattattttgcatat
cgcggctttaaatacctcaggcttgatggaaccacaaaagcagaggaccggggcatgctg
ctgaaaaccttcaatgagcctggctccgagtatttcatcttcttgctcagtacccgggcc
ggggggctcgggctgaacctgcagtcagctgacactgtgatcattttcgacagtgactgg
aatcctcaccaggacctgcaagcccaggaccgagcccaccgcatcggccagcagaatgag
gtacgtgtgctccgcctctgcacagtcaacagcgtggaggagaagatcctggccgcggcc
aagtataagctcaacgtggaccagaaggtgatccaggctggcatgtttgaccagaagtcc
tctagccatgagcgccgcgccttcctacaggccatcctggagcatgaggagcaggacgag
cgcatggatctggaccgcagacgcgaggaggcccgcaatcccaagcgtaagccgcgcctg
atggaggaggatgagctcccctcgtggatcatcaaggatgatgctgaggtggagcggctg
acctgtgaggaagaggaggaaaagatgtttggccgcggctcccgccatcgcaaggaggta
gactacagtgactcactgacggagaagcagtggcttaaggccattgaggagggcacgctg
gaggagatcgaagaggaggtccggcagaagaaatcctcacggaagcgcaaacgggacagt
gacgccgggtcctccacgccaaccaccagcacccgaagccgcgacaaagatgatgagagc
aagaagcaaaagaagcgtgggcggccacctgccgagaagctctccccaaacccgcctaac
ctcactaagaagatgaagaagatcgtggatgcagtgatcaagtacaaggacagcagcagt
ggacggcagctcagcgaggtgttcatccagcttccctcacgcaaggagctgcctgagtac
tatgagcttattcgcaagcccgtggactttaagaagataaaggagcgcatccgcaaccac
aagtaccgcagcctcaacgacctggagaaggacgtgatgctcctgtgccagaatgcgcag
accttcaacctggagggctccctgatctacgaagactccattgttctacagtcagtcttt
accagcgtgaggcagaagattgagaaagaggatgacagtgaaggtgaagagagtgaggag
gaagaggaaggcgaggaggaaggctccgagtccgagtcccgctctgtgaaagtgaagatc
aagcttggccggaaggagaaggcacaggaccggctgaaggggggccgccggcggccaagc
cgggggtcccgggccaagccagtggtgagcgatgacgacagtgaggaggagcaagaggag
gaccgctcaggaagtggcagcgaggaagactga

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