Otolemur garnettii (small-eared galago): 100961565
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Entry
100961565 CDS
T07855
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03082
ATP-dependent chromatin remodeling
oga04714
Thermogenesis
oga05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100961565 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100961565 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100961565 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oga03021
]
100961565 (SMARCA4)
03036 Chromosome and associated proteins [BR:
oga03036
]
100961565 (SMARCA4)
Transcription machinery [BR:
oga03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100961565 (SMARCA4)
Chromosome and associated proteins [BR:
oga03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
100961565 (SMARCA4)
Chromatin remodeling factors
BAF complex
100961565 (SMARCA4)
PBAF complex
100961565 (SMARCA4)
GBAF(ncBAF) complex
100961565 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Htt_C-HEAT
Motif
Other DBs
NCBI-GeneID:
100961565
NCBI-ProteinID:
XP_012665589
Ensembl:
ENSOGAG00000016148
LinkDB
All DBs
Position
Unknown
AA seq
1590 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPSQG
PGGYPQDNMHQMHKPLESMHEKGMPDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGTDPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPALPPPSVSTTGPGPGPGPGPGP
GPGPGPAPPNYSRPHGIGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTST
PQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKP
RGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQ
EVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNS
ILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGY
RKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPA
IGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSE
ESGSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEY
GVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILA
DEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSP
AARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLN
THYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNE
EETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLL
TDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRA
SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML
LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE
VRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE
RMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEV
DYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDES
KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEY
YELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVF
TSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPS
RGSRAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccacccctgggcggaactcctcggccaggaccttccccgggccca
ggtccctcacctggagccatgctgggccctagcccaggtccctcaccaggctctgcccac
agcatgatggggcccagccctgggccaccctcagcaggacaccctatcccatcccagggg
cctggagggtaccctcaggacaacatgcaccaaatgcacaagccattggagtcgatgcac
gagaagggcatgccggatgacccacgctacaatcagatgaaaggcatgggcatgaggtct
gggggccacgcaggcatggggcccccacccagccccatggaccagcactcccaaggttac
ccctcacccctaggtggctctgagcatgcctctagtccagttccagccagcggcccgtcc
tcgggcccccagatgtcatctgggccaggaggagcgccattggatggcaccgacccccag
gccttggggcagcaaaaccggggcccgaccccatttaaccagaaccagctgcaccagctc
agagctcagatcatggcctacaagatgctggccagggggcagccactccctgaccacctg
cagatggccgtgcaaggaaagcggccgatgcccgggatgcagcagcagatgccagcgcta
cctccaccctcagtgtccaccacgggacctggccctggccctggccccggcccgggcccc
ggccctggcccaggaccagcacctccaaattatagcaggcctcatggcatcggagggccc
aacatgcctccccctggaccctcaggcgtaccccccgggatgccaggtcagcccccggga
gggcctcccaagccctggcctgaaggacccatggcaaatgcagctgcccctaccagcacc
cctcagaagctgatccccccgcagcccacgggtcgcccttcacctgctccccctgctgtc
ccgcctgctgcctcacccgtgatgccaccccagacacagtctccagggcagccggcccag
cccgcccccatggtgccactgcaccagaagcagagtcgaatcacccccatccagaagcca
cggggccttgaccctgtagagatccttcaagagcgggagtacaggctgcaggctcgcatt
gcacaccgaattcaggaacttgaaaaccttcctgggtccctggctggggatttgcgaacc
aaagcaaccattgagctcaaggccctcaggctgctgaacttccagaggcagctgcgccag
gaggtggtggtttgcatgcggagggacacagcccttgagactgccctcaacgccaaggcc
tacaagcgcagcaagagacagtccctgcgcgaggcccgcatcactgagaagctggagaag
caacagaagatcgagcaggagcggaagcgcaggcaaaagcaccaggaatacctcaatagc
attctccagcatgccaaggatttcaaagaatatcaccgatcagtcacaggaaaaatccag
aagctcaccaaggctgtggccacatatcacgctaacacagagcgggaacagaagaaagaa
aatgaaagaattgagaaggagagaatgcggaggcttatggctgaagacgaggagggctac
cgcaagctcattgatcagaagaaggacaagcgcctggcctacctcttgcagcagacagac
gagtatgtggctaacctcactgagttggtgcggcagcacaaggccgcccaggttgccaag
gaaaagaagaagaaaaagaaaaagaagaaggcagaaaatgcagaaggacagacacctgcc
attgggcctgatggtgagcctctggatgagaccagccagatgagcgacctccccgtgaag
gtgatccacgtggagagtggcaagatcctgacaggcacagatgctccgaaagcagggcaa
ctggaggcttggcttgagatgaacccggggtatgaagttgcaccaagatctgatagtgaa
gaaagtggttcagaagaagaggaagaggaggaggaggaagagcagcctcagccagcgcag
cctcccaccctgcctgtggaggagaagaagaagattccagatccagatagtgacgatgtc
tctgaggtggacgcacggcatatcattgagaatgctaagcaagatgttgatgatgagtat
ggtgtgtcccaggcccttgcgcgtggccttcagtcatactacgctgtggcccatgctgtc
actgagagagtagacaagcagtcggcgcttatggtcaacggtgttcttaaacagtaccag
atcaaaggcttggagtggctagtgtccctgtacaacaacaacctaaatggaatcctggca
gacgagatgggcctgggcaagactatccagaccattgcactcatcacatacctcatggag
cacaagcgtatcaacgggcctttccttatcatcgtacctctctcaacactgtctaactgg
gcatatgaatttgacaagtgggccccttctgtggtgaaggtgtcctacaagggctccccg
gcagcaagacgggcttttgtcccacagctccggagtgggaagttcaatgttttgctgact
acatacgaatacatcattaaagacaagcacatccttgccaagattcgttggaagtacatg
attgtggatgagggccaccgcatgaagaaccaccactgcaagctgacacaggtgctcaac
actcactacgtggccccccgccgcctgctgctgacgggtacacccctacagaataagctc
cctgagctctgggcactgctcaacttcctgctgcccaccatcttcaagagctgcagcacc
tttgagcagtggttcaatgcaccctttgccatgactggtgaaaaggtggacctgaatgag
gaggagaccatcctcatcatccggcgtctccacaaagtgctgcggccctttctgctccgg
cggctcaagaaggaagttgaagcccagttgcccgaaaaggtggagtacgtcatcaagtgt
gacatgtctgctctgcagcgggtgctataccggcacatgcaggccaagggtgtgctgctg
accgatggctcagagaaggacaagaagggcaagggcggcaccaagacgctgatgaacacc
atcatgcagctgaggaagatctgcaaccatccgtacatgttccagcacattgaggagtcc
ttttccgagcacttgggcttcactggcggcatcgttcaaggactggacttgtacagagcc
tcgggtaaatttgagcttcttgatagaattcttcccaaactccgtgcaaccaaccacaaa
gtgctgctgttctgccagatgacctctctcatgacaatcatggaggattattttgcatat
cgcggctttaaatacctcaggcttgatggaaccacaaaagcagaggaccggggcatgctg
ctgaaaaccttcaatgagcctggctccgagtatttcatcttcttgctcagtacccgggcc
ggggggctcgggctgaacctgcagtcagctgacactgtgatcattttcgacagtgactgg
aatcctcaccaggacctgcaagcccaggaccgagcccaccgcatcggccagcagaatgag
gtacgtgtgctccgcctctgcacagtcaacagcgtggaggagaagatcctggccgcggcc
aagtataagctcaacgtggaccagaaggtgatccaggctggcatgtttgaccagaagtcc
tctagccatgagcgccgcgccttcctacaggccatcctggagcatgaggagcaggacgag
cgcatggatctggaccgcagacgcgaggaggcccgcaatcccaagcgtaagccgcgcctg
atggaggaggatgagctcccctcgtggatcatcaaggatgatgctgaggtggagcggctg
acctgtgaggaagaggaggaaaagatgtttggccgcggctcccgccatcgcaaggaggta
gactacagtgactcactgacggagaagcagtggcttaaggccattgaggagggcacgctg
gaggagatcgaagaggaggtccggcagaagaaatcctcacggaagcgcaaacgggacagt
gacgccgggtcctccacgccaaccaccagcacccgaagccgcgacaaagatgatgagagc
aagaagcaaaagaagcgtgggcggccacctgccgagaagctctccccaaacccgcctaac
ctcactaagaagatgaagaagatcgtggatgcagtgatcaagtacaaggacagcagcagt
ggacggcagctcagcgaggtgttcatccagcttccctcacgcaaggagctgcctgagtac
tatgagcttattcgcaagcccgtggactttaagaagataaaggagcgcatccgcaaccac
aagtaccgcagcctcaacgacctggagaaggacgtgatgctcctgtgccagaatgcgcag
accttcaacctggagggctccctgatctacgaagactccattgttctacagtcagtcttt
accagcgtgaggcagaagattgagaaagaggatgacagtgaaggtgaagagagtgaggag
gaagaggaaggcgaggaggaaggctccgagtccgagtcccgctctgtgaaagtgaagatc
aagcttggccggaaggagaaggcacaggaccggctgaaggggggccgccggcggccaagc
cgggggtcccgggccaagccagtggtgagcgatgacgacagtgaggaggagcaagaggag
gaccgctcaggaagtggcagcgaggaagactga
DBGET
integrated database retrieval system