Otolemur garnettii (small-eared galago): 100961701
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Entry
100961701 CDS
T07855
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100961701 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oga03019
]
100961701 (PATL1)
Messenger RNA biogenesis [BR:
oga03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100961701 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
100961701 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
CASTOR1_ACT-like
Motif
Other DBs
NCBI-GeneID:
100961701
NCBI-ProteinID:
XP_012667913
Ensembl:
ENSOGAG00000004351
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGSLNSSIWDGSEVLRRI
RGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSPIIGSPPVRAVPIGTP
PKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQICSVPNSSLLGHPFPPSVP
PVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKLLQGRVGQMLPPAPGF
RAFFSAPPSATPPPQQHPPGPGPHLQNLRSQAPMFRPDTTHLHPQHRRLLHQRQQQNRNQ
HRNLNGAGDRGTHRSSHQDHLRKDPYANLMLQREKDWVSKIQMMQLQSTDPYLDDFYYQN
YFEKLEKLSAAEEMQGDGPKKERTKLITPQVAKLEHAYKPVQFEGSLGKLTVSSVNNPRK
MIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTFSLLLDVEDYERRYLLSLEEERPALM
EERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARILPFLSTEQAADILMT
TARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQLMNLPQSAAAPAPSNPH
LTAVLQNKFGLSLLLILLSRGEDLQSSDSATESTQNNQWTEVMFMATRELLRIPQAALAK
PISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggacttgttgggtgaccatgaagagaatctggcagaaaggctcagtaagatggtgatt
gaaaatgaactagaagatccagctatcatgagggcagtgcaaaccaggccagttttgcaa
ccccaaccaggaagtctgaattctagcatctgggatggatctgaggttctgaggcgaatc
cgaggaccactccttgctcaggaaatgcctacagtgtctgtgttagaatatgccttgcct
cagaggcccccacagggcccagaagatgatcgggacctttctgaacgtgcattaccaaga
cggtcaacttcacctatcattgggagtcctcctgttagagctgtccccataggcacccca
cctaagcagatggctgtacccagcttcaaccaacagattctgtgtccgaagcctgtccat
gttcgtcccccaatgccaccgcgttatcctgctccctatggtgagaggatgtctccaaac
cagatctgcagtgtcccgaactcttcccttctgggtcaccctttccctcctagtgttcct
cctgttctcagccccctccagagagcacagcttcttggaggagcacagctacagcctgga
cggatgtctcccagccagtttgcacgggtccctggatttgttggtagtccgcttgctgcc
atgaatcctaagttgctacaagggcgagttgggcagatgcttcccccagcaccaggcttc
cgtgccttctttagtgctccaccctctgccacaccacctccacagcagcaccctcctggc
ccaggacctcacctgcaaaacctaagatctcaggccccaatgtttagaccagatacaact
cacctgcatccacagcaccgtcgacttttgcatcagagacagcaacagaatagaaatcag
catcggaatctcaatggtgcaggagatagaggaactcaccggagcagtcaccaagatcac
ctccgaaaggatccatatgccaatctcatgttgcagcgtgaaaaggattgggtctctaaa
atccagatgatgcaactgcaaagcactgatccctacctggatgatttttattaccagaat
tacttcgaaaaactggagaaattgtcagctgctgaagaaatgcaaggtgatggccctaaa
aaggagcgcactaagctcatcacccctcaggtggccaaactggagcatgcctataagcca
gtgcagtttgagggctctttgggaaagctcactgtctctagtgtgaataatccccgaaaa
atgattgatgctgttgtgacatctcggagtgaggatgatgagacaaaagaaaaacaggtt
cgagacaagagaagaaaaacccttgtcataattgagaaaacctttagtttactccttgat
gtagaggattatgaaaggcgttatctcctaagtctagaagaagagcgacctgccttgatg
gaggaaagaaagcacaaaatttgtagcatgtatgacaacttaagggggaaattgcctgga
caagagaggccaagtgatgaccactttgtacagatcatgtgtatccgaaaagggaagaga
atggttgcccgtattcttcctttcctctccacagagcaagcagctgacattctcatgaca
acagccaggaacctccctttccttatcaagaaggatgcacaagatgaggtgctgccatgc
ttactgagtcccttctctcttctcctctatcatcttccatcagtgactgtcaccagcctt
ctgcaacagctaatgaacctacctcaaagtgcagctgcaccagcaccctccaatcctcac
ctcactgctgtgctccagaacaagtttggcctgtcactgctcctcatccttctgagccgt
ggagaagacctacagagttcagactctgccacagaatcaacgcaaaataatcagtggaca
gaggtgatgttcatggcaacccgagaacttctacggattccccaagcagccctggccaag
ccaatctctatacccacaaacctagtatccctcttttctcgctatgttgaccggcagaaa
ctgaacttgctggagacaaaactgcagctagttcaggggatacgataa
DBGET
integrated database retrieval system
