Otolemur garnettii (small-eared galago): 100962161
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Entry
100962161 CDS
T07855
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X2
KO
K08525
retinoid X receptor beta
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03320
PPAR signaling pathway
oga04659
Th17 cell differentiation
oga04919
Thyroid hormone signaling pathway
oga04920
Adipocytokine signaling pathway
oga04928
Parathyroid hormone synthesis, secretion and action
oga05200
Pathways in cancer
oga05202
Transcriptional misregulation in cancer
oga05207
Chemical carcinogenesis - receptor activation
oga05216
Thyroid cancer
oga05222
Small cell lung cancer
oga05223
Non-small cell lung cancer
oga05226
Gastric cancer
oga05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
100962161 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
100962161 (RXRB)
03320 PPAR signaling pathway
100962161 (RXRB)
04919 Thyroid hormone signaling pathway
100962161 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
100962161 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100962161 (RXRB)
05202 Transcriptional misregulation in cancer
100962161 (RXRB)
05207 Chemical carcinogenesis - receptor activation
100962161 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
100962161 (RXRB)
05216 Thyroid cancer
100962161 (RXRB)
05222 Small cell lung cancer
100962161 (RXRB)
05223 Non-small cell lung cancer
100962161 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100962161 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oga03000
]
100962161 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oga03310
]
100962161 (RXRB)
Transcription factors [BR:
oga03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
100962161 (RXRB)
Nuclear receptors [BR:
oga03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
100962161 (RXRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
100962161
NCBI-ProteinID:
XP_003789128
Ensembl:
ENSOGAG00000011689
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAAAGEQQT
PEPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGIRPPSPGPPLPLSAASSLGGSGAPPP
PPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKP
PVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSC
RDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDADGEGAGGAPEEMPV
DRILEAELAVEQKSDQGVESPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFS
SLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVL
TELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPE
QQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggccgctcgcccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcgtcccggtggcggcggcgacgg
ccctggctggatcccgcagcggcggcggcggcggcggcagcagccggagaacaacaaacc
ccggagccggagccgggggaggctggacgggacgggatgggcgacagcgggcgggactct
cgaagtccagacagctcctccccaaatccccttccccaggggatccgtcccccttctcct
gggccacctctacctctttcagcagcctcatcccttggaggctcaggggccccaccccca
ccccctatgccaccacccccactgggctccccatttccagtcatcagttcttccatgggg
tcccctggtctaccccctccagctcccccaggattctccggtcctgtcagcagcccccag
attaactcaacagtgtcgctccctgggggtgggtctggcccccctgaagatgtgaagcca
cctgtcttaggggtccggggcctgcactgtccaccccctccaggtggccctggggctggc
aaacggctttgtgcaatctgcggggacagaagctcaggcaaacactacggggtttacagc
tgtgagggctgcaagggcttctttaaacgcaccatccgtaaagaccttacatactcttgc
cgggacaacaaagactgcacagtggacaagcgccagcgaaaccgctgtcagtactgccgc
tatcagaagtgcctggccacaggcatgaagagggaggcggtacaagaagaacgtcagcgg
ggaaaggacaaggatgcagatggggagggggctgggggagcccctgaggagatgcctgtt
gacaggattctggaggcagagcttgctgtggagcagaagagcgaccagggtgttgaaagt
cctgggggaactgggggtagcggcagcagtccaaatgaccccgtgactaacatctgtcag
gctgctgacaaacaactattcacacttgttgagtgggcgaagaggataccacacttttcc
tccttgcctctggatgaccaggtcatattgctgcgggcaggctggaatgagcttctcatt
gcctccttctcccaccgatccattgatgttcgagatggcatcctccttgccacaggtctt
catgtgcaccgcaactcagcccattctgcaggcgtcggagccatctttgatcgggtgctg
acagagctagtgtccaaaatgcgtgacatgaggatggacaagacagagcttggctgcctg
agggcaatcattctgtttaatccagatgccaagggcctttctaatcccagcgaggtggag
gtcctgcgggagaaagtgtatgcatcactggagacctactgcaagcagaagtaccctgag
cagcagggacggtttgccaagttgctgctccgtcttcctgccctacggtccatcggcctt
aaatgtctagaacatctgttttttttcaagctcattggcgatacccccatcgataccttc
ctcatggagatgcttgaggctccccatcagctggcctga
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