KEGG   Otolemur garnettii (small-eared galago): 100962402
Entry
100962402         CDS       T07855                                 
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2
  KO
K10140  DNA damage-binding protein 2
Organism
oga  Otolemur garnettii (small-eared galago)
Pathway
oga03420  Nucleotide excision repair
oga04115  p53 signaling pathway
oga04120  Ubiquitin mediated proteolysis
oga05161  Hepatitis B
oga05169  Epstein-Barr virus infection
oga05200  Pathways in cancer
oga05202  Transcriptional misregulation in cancer
oga05210  Colorectal cancer
oga05212  Pancreatic cancer
oga05213  Endometrial cancer
oga05214  Glioma
oga05216  Thyroid cancer
oga05217  Basal cell carcinoma
oga05218  Melanoma
oga05220  Chronic myeloid leukemia
oga05222  Small cell lung cancer
oga05223  Non-small cell lung cancer
oga05224  Breast cancer
oga05225  Hepatocellular carcinoma
oga05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:oga00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100962402 (DDB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100962402 (DDB2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100962402 (DDB2)
   05202 Transcriptional misregulation in cancer
    100962402 (DDB2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    100962402 (DDB2)
   05212 Pancreatic cancer
    100962402 (DDB2)
   05225 Hepatocellular carcinoma
    100962402 (DDB2)
   05226 Gastric cancer
    100962402 (DDB2)
   05214 Glioma
    100962402 (DDB2)
   05216 Thyroid cancer
    100962402 (DDB2)
   05220 Chronic myeloid leukemia
    100962402 (DDB2)
   05217 Basal cell carcinoma
    100962402 (DDB2)
   05218 Melanoma
    100962402 (DDB2)
   05213 Endometrial cancer
    100962402 (DDB2)
   05224 Breast cancer
    100962402 (DDB2)
   05222 Small cell lung cancer
    100962402 (DDB2)
   05223 Non-small cell lung cancer
    100962402 (DDB2)
  09172 Infectious disease: viral
   05161 Hepatitis B
    100962402 (DDB2)
   05169 Epstein-Barr virus infection
    100962402 (DDB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oga04121]
    100962402 (DDB2)
   03400 DNA repair and recombination proteins [BR:oga03400]
    100962402 (DDB2)
Ubiquitin system [BR:oga04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     100962402 (DDB2)
DNA repair and recombination proteins [BR:oga03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      100962402 (DDB2)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR75_1st Beta-prop_EML_2 WDR55 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_WDR19_1st EIF3I WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_EML WD_LRWD1 Beta-prop_Vps41 MIOS_WD40
Other DBs
NCBI-GeneID: 100962402
NCBI-ProteinID: XP_003781336
Ensembl: ENSOGAG00000012408
UniProt: H0X6U6
LinkDB
Position
Unknown
AA seq 427 aa
MAPRKLPETQKTSEIVLRLRNKRNRSPRELTPEAKKLFVKGSDSSRRCDSDCLWAGLGSL
QVPLPCHSIVRTLHQYKLGRAAWPALQQGLQQSFLHSLDSYRIFQKAAPFDRRATSLVWH
PTHPSTVAVGSKGGDILLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFFASSMEGT
TRLQDFKGNTLQVFTSSDTCNVWFCSLDVSAGSRMVVTGDNVGNVVLLHMDGKELWNLRM
HKKKVTHVALNPCCDWLLATASVDQTVKIWDLRQVRGKASFLHSLPHRHPVNAACFSPDG
ARLLTTDQKNEIRVYSVSQWDCPLGLIPHPHRHFQHLTPIKATWHPRYNLIVVGRYPDPN
FKSCTPYELRTIDVFDGNSGKMMCQLYDPEYSGISSLNEFNPIGDTLASAMGYHILIWSQ
EEAGTQK
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggctcccaggaaactcccagaaacccagaagacctccgagattgtgttacgcctcagg
aacaagaggaacagaagtccccgggagctgacgcccgaggccaagaagctctttgtgaag
ggctccgattctagcagaagatgtgactcagactgcctttgggcgggattgggtagcctg
caggtcccactaccatgccacagcattgtcaggaccctccaccagtataagttgggcaga
gctgcatggccagcactacagcagggtctccagcagtcctttttgcactctctggactcc
taccggatattccaaaaggctgctccctttgacaggagggctacatccttggtgtggcac
ccaactcaccccagcactgtggctgtcggttccaaagggggagatatattgctctggaac
tttggcataaaggacaaacccaccttcattaaagggattggagctggagggagcatcacg
gggctgaagtttaaccctctcaataccaaccagtttttcgcctcctcaatggagggaaca
actaggctgcaagactttaaaggcaacactctacaagtttttaccagctcagacacctgc
aatgtctggttttgtagcctggatgtgtctgctggaagccgaatggtggtcacaggagac
aatgtggggaacgtggtcctgctgcacatggatggcaaggagctttggaatctcagaatg
cacaaaaagaaagtgacccatgtggccctgaacccatgctgtgattggttgctggccaca
gcctccgtagatcaaacagtgaaaatctgggacctgcgccaggttagagggaaagccagc
ttcctgcactcgctgccgcacaggcatcctgtcaacgcagcttgtttcagccctgacgga
gcccgactcctgaccactgaccagaagaatgagatccgggtttactctgtctcccagtgg
gactgtcccctgggcctgatcccacaccctcaccgtcacttccagcaccttacacccatc
aaggcaacctggcatcctcggtataacctcattgttgtgggccgatacccagatcctaat
ttcaaaagttgtaccccttatgaattaaggacaattgatgtgtttgatggaaactcaggg
aagatgatgtgccagctctatgacccagaatattctggtatcagctcgctcaatgagttc
aatcccataggggacacactggcctctgcaatgggttatcacattcttatttggagccaa
gaggaagctgggacacagaaatga

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