KEGG   Otolemur garnettii (small-eared galago): 100963549
Entry
100963549         CDS       T07855                                 
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
  KO
K28837  protocadherin-19, delta 2
Organism
oga  Otolemur garnettii (small-eared galago)
Pathway
oga04519  Cadherin signaling
Brite
KEGG Orthology (KO) [BR:oga00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    100963549 (PCDH19)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oga04515]
    100963549 (PCDH19)
Cell adhesion molecules [BR:oga04515]
 Cadherins
  Protocadherins
   100963549 (PCDH19)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Ig_CLSTN Cadherin_FAT4_N DUF6750
Other DBs
NCBI-GeneID: 100963549
NCBI-ProteinID: XP_003797877
Ensembl: ENSOGAG00000028258
LinkDB
Position
Unknown
AA seq 1148 aa
MESLMLPVLLLLAVLWTQAAALINLKYSVEEEQRAGTVIANVAKDAREAGFALDPRQASA
FRVVSNSAPHLVDINPSSGLLVTKQKIDRDLLCRQSPKCIISLEVMSSSMEICVIKVEIK
DLNDNAPSFPAAQIELEISEAASPGTRIPLDSAYDPDSGSFGVQTYELTPNELFGLEIKT
RGDGSRFAELVVEKSLDRETQSHYSFRITALDGGDPPHLGTVGLSIKVTDSNDNNPVFGE
STYSVSVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTV
TGALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSELVEVSE
SAPPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQHDQYN
LTIQARDGGVPMLQSAKSFTVRITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDP
DLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGL
PSLQSNATVRVIILDVNDNTPVITAPPLINGTAEVYIPRNSGIGYLVTVVKADDYDEGEN
GRVTYDMTEGYRGFFEIDHVNGEVRTTRTFGESSKASYELIVVAHDHGKTSLSASALVLI
YLSPALDAQESMGSVNLSLIFIIALGSIAGILFVTMIFVAIKCKRDNKDIRTYNCSNCLT
ITCLLGCFIKGQKSKCLHCISVSPISEEQDKKAEEKVSLRGKRIAEYSYGHQKKSSKKKK
ISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVENQNT
RNTSANHIYHHSFNSQGPQQPDLIINGVPLPETENYSFDSNYVNSRAHLIKSSSTFKDLE
GNSLKDSGHEESDQTDSEHDVQRSLYCDTAVNDVLNTSVTSMGSQMPEHDQNEGFHCREE
CRILGHSDRCWMPRNPMPTRSKSPEHVRNIIALSIEATAADVEAYDDCGPTKRTFATFGK
DVSDHPAEERPILKGKRTVDVTICSPKVNSAIREAGNGCEAISPVTSPLHLKSPLPTKPS
VSYTVALAPPARDLEQYATNVNNGPSRPSEAEPRGADSEKVMHEVNPILKEGRDKESPVV
KRLKDIIL
NT seq 3447 nt   +upstreamnt  +downstreamnt
atggagtcgctcatgctgccggtgctgctgctgctggcggtactgtggacgcaggcggcc
gccctcattaacctcaagtactcggtagaagaggaacagcgcgccgggacggtgatcgcc
aacgtggccaaagacgcgcgggaggcaggctttgcgctggaccctcggcaggcctccgcc
ttccgtgtggtgtccaactcagctccgcatctagtggacatcaaccccagctctggcttg
ttggtcaccaagcagaagatcgaccgcgacttgctgtgccgccagagccccaagtgcatc
atctcgctcgaggtcatgtccagctcaatggagatctgcgtgattaaagtggagatcaag
gacctgaacgataacgcgcccagttttccggcagcacagatcgagctggagatctcagaa
gcggccagccctgggacgcgcatcccgctggacagcgcctacgacccggactcaggcagc
tttggcgtgcagacctacgagctcactcccaacgagctgtttggcctggagatcaagacg
cgaggcgatggctcgcgttttgctgaactggtggtggagaagagcctggaccgagaaaca
cagtcacactacagctttcgcattacagcgctggacggcggcgaccctccacacttgggc
accgttggactcagtatcaaagtgaccgactccaatgacaacaacccagtgtttggcgaa
tccacctactcagtaagtgtgccagagaattcgcctcctaacacccccgtcatccgcctc
aacgccagcgatccagatgagggcaccaatggccaggtggtctactccttctatggctat
gtcaacgaccgcactcgtgagcttttccagatcgacccgcacagcggcctggtcactgtc
accggagctctagactacgaagagggccacgtgtacgaactagacgtgcaggccaaggac
ctggggcccaactctatcccggcacactgcaaggtcactgtcagcgtgctggacaccaat
gacaacccgccggtcatcaacttattgtcagtcaacagcgagcttgtggaggtgagcgag
agcgcccccccgggctacgtgatcgccctggtgcgggtgtctgatcgtgactccggcctc
aatggacgggtgcagtgccgtttgcttggcaatgtgccctttcgactgcaagaatacgaa
agcttctccactatcctagtggacggacggctagaccgtgaacaacatgaccaatacaac
ctcacaatccaggcgcgcgacggcggcgtgcccatgctgcagagtgccaagtcctttact
gtgcgcatcactgatgagaacgacaaccatcctcacttctccaagccctattaccaggtc
atcgtgcaggagaacaacacgcctggcgcttatctgctttccgtgtcagcccgagacccc
gatctgggtctcaatggcagtgtctcctaccagattgtgccatcacaggtgcgagacatg
cctgtcttcacctatgtctctatcaaccccaactcgggtgacatctatgcgcttcgatcc
tttaaccatgagcagaccaaggcattcgaattcaaggtgctggcaaaggatggaggcctg
ccctccctgcaaagcaacgccacggtgcgggtcattatcctcgacgtcaacgacaacacc
ccggtcatcacggccccacccctgatcaatggcaccgcggaggtctacatcccccgcaac
tctggcataggctacctagtgactgttgtcaaggcagacgactacgacgaaggtgaaaat
ggtcgagtgacctatgacatgaccgaaggctaccgaggcttctttgaaatagatcacgtc
aatggcgaagtcagaaccactcgcacctttggtgagagctccaaggcttcctatgagctt
atcgtggtggcgcacgaccacggcaagacgtctctttctgcctctgcgctcgtcttaatc
tatctgtcccctgctctcgatgcccaagaatcaatgggctccgtgaacttgtccctgatt
ttcattattgccctaggctccattgccggtatcctctttgtcactatgatcttcgtggcc
atcaagtgcaagagagacaacaaagatatccggacctacaactgcagtaattgtttaacc
atcacttgtctcctcggctgttttataaaaggacaaaaaagcaagtgtctgcattgcatc
tcggtttctcctattagcgaggagcaagacaaaaaggcagaggagaaagtgagcctaagg
ggaaagagaatcgctgagtactcctatgggcatcaaaagaaatcaagcaagaagaaaaaa
atcagtaagaatgacatccgtctggttccccgggatgtggaggagacagacaagatgaac
gttgtcagctgctcctccctgacctcttccctcaactatttcgactaccatcagcagaca
ttgcccctgggctgccgccgctctgagagcactttcctgaatgtggagaaccagaatacc
cgcaacaccagcgccaaccacatctaccatcactctttcaacagccaggggccccagcag
cctgacctgatcatcaatggtgtgcctctgcctgagactgaaaactattcttttgactcc
aactacgtgaatagccgagcccatttaatcaaaagcagctccaccttcaaggatttagag
ggcaacagcctgaaggatagtggacatgaggagagtgaccagactgacagtgagcatgat
gtccagaggagcctgtattgtgatactgctgtcaatgatgtgctgaacaccagtgtgacc
tctatgggatctcagatgcctgagcatgatcagaatgaaggatttcattgcagggaagag
tgccggattcttggccactctgacaggtgctggatgccccggaatcccatgcccactcgt
tccaagtccccggagcatgtgagaaacatcattgcgctgtccattgaagctactgctgct
gatgttgaggcgtatgacgactgcggccccaccaaacggactttcgcaaccttcgggaaa
gatgttagcgaccacccggctgaggagaggcccatcctgaaaggcaagaggactgttgat
gtgaccatctgcagccccaaggtcaatagcgctatccgggaggctggcaatggctgtgag
gctattagccctgtcacctcccccctccacctcaagagccctctgccaaccaagccttct
gtgtcctacactgttgctctggctcccccggcccgtgatctggagcagtatgccaccaat
gtcaacaatggcccttctcgtccttctgaagctgagccccgtggagctgacagtgagaaa
gtcatgcacgaggtcaaccccattctgaaggagggtcgcgacaaagagtcccctgtcgtg
aagcgtctgaaggatatcattctctaa

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