Otolemur garnettii (small-eared galago): 100963549
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Entry
100963549 CDS
T07855
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K28837
protocadherin-19, delta 2
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
100963549 (PCDH19)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oga04515
]
100963549 (PCDH19)
Cell adhesion molecules [BR:
oga04515
]
Cadherins
Protocadherins
100963549 (PCDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Ig_CLSTN
Cadherin_FAT4_N
DUF6750
Motif
Other DBs
NCBI-GeneID:
100963549
NCBI-ProteinID:
XP_003797877
Ensembl:
ENSOGAG00000028258
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
MESLMLPVLLLLAVLWTQAAALINLKYSVEEEQRAGTVIANVAKDAREAGFALDPRQASA
FRVVSNSAPHLVDINPSSGLLVTKQKIDRDLLCRQSPKCIISLEVMSSSMEICVIKVEIK
DLNDNAPSFPAAQIELEISEAASPGTRIPLDSAYDPDSGSFGVQTYELTPNELFGLEIKT
RGDGSRFAELVVEKSLDRETQSHYSFRITALDGGDPPHLGTVGLSIKVTDSNDNNPVFGE
STYSVSVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTV
TGALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSELVEVSE
SAPPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQHDQYN
LTIQARDGGVPMLQSAKSFTVRITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDP
DLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGL
PSLQSNATVRVIILDVNDNTPVITAPPLINGTAEVYIPRNSGIGYLVTVVKADDYDEGEN
GRVTYDMTEGYRGFFEIDHVNGEVRTTRTFGESSKASYELIVVAHDHGKTSLSASALVLI
YLSPALDAQESMGSVNLSLIFIIALGSIAGILFVTMIFVAIKCKRDNKDIRTYNCSNCLT
ITCLLGCFIKGQKSKCLHCISVSPISEEQDKKAEEKVSLRGKRIAEYSYGHQKKSSKKKK
ISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVENQNT
RNTSANHIYHHSFNSQGPQQPDLIINGVPLPETENYSFDSNYVNSRAHLIKSSSTFKDLE
GNSLKDSGHEESDQTDSEHDVQRSLYCDTAVNDVLNTSVTSMGSQMPEHDQNEGFHCREE
CRILGHSDRCWMPRNPMPTRSKSPEHVRNIIALSIEATAADVEAYDDCGPTKRTFATFGK
DVSDHPAEERPILKGKRTVDVTICSPKVNSAIREAGNGCEAISPVTSPLHLKSPLPTKPS
VSYTVALAPPARDLEQYATNVNNGPSRPSEAEPRGADSEKVMHEVNPILKEGRDKESPVV
KRLKDIIL
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgctcatgctgccggtgctgctgctgctggcggtactgtggacgcaggcggcc
gccctcattaacctcaagtactcggtagaagaggaacagcgcgccgggacggtgatcgcc
aacgtggccaaagacgcgcgggaggcaggctttgcgctggaccctcggcaggcctccgcc
ttccgtgtggtgtccaactcagctccgcatctagtggacatcaaccccagctctggcttg
ttggtcaccaagcagaagatcgaccgcgacttgctgtgccgccagagccccaagtgcatc
atctcgctcgaggtcatgtccagctcaatggagatctgcgtgattaaagtggagatcaag
gacctgaacgataacgcgcccagttttccggcagcacagatcgagctggagatctcagaa
gcggccagccctgggacgcgcatcccgctggacagcgcctacgacccggactcaggcagc
tttggcgtgcagacctacgagctcactcccaacgagctgtttggcctggagatcaagacg
cgaggcgatggctcgcgttttgctgaactggtggtggagaagagcctggaccgagaaaca
cagtcacactacagctttcgcattacagcgctggacggcggcgaccctccacacttgggc
accgttggactcagtatcaaagtgaccgactccaatgacaacaacccagtgtttggcgaa
tccacctactcagtaagtgtgccagagaattcgcctcctaacacccccgtcatccgcctc
aacgccagcgatccagatgagggcaccaatggccaggtggtctactccttctatggctat
gtcaacgaccgcactcgtgagcttttccagatcgacccgcacagcggcctggtcactgtc
accggagctctagactacgaagagggccacgtgtacgaactagacgtgcaggccaaggac
ctggggcccaactctatcccggcacactgcaaggtcactgtcagcgtgctggacaccaat
gacaacccgccggtcatcaacttattgtcagtcaacagcgagcttgtggaggtgagcgag
agcgcccccccgggctacgtgatcgccctggtgcgggtgtctgatcgtgactccggcctc
aatggacgggtgcagtgccgtttgcttggcaatgtgccctttcgactgcaagaatacgaa
agcttctccactatcctagtggacggacggctagaccgtgaacaacatgaccaatacaac
ctcacaatccaggcgcgcgacggcggcgtgcccatgctgcagagtgccaagtcctttact
gtgcgcatcactgatgagaacgacaaccatcctcacttctccaagccctattaccaggtc
atcgtgcaggagaacaacacgcctggcgcttatctgctttccgtgtcagcccgagacccc
gatctgggtctcaatggcagtgtctcctaccagattgtgccatcacaggtgcgagacatg
cctgtcttcacctatgtctctatcaaccccaactcgggtgacatctatgcgcttcgatcc
tttaaccatgagcagaccaaggcattcgaattcaaggtgctggcaaaggatggaggcctg
ccctccctgcaaagcaacgccacggtgcgggtcattatcctcgacgtcaacgacaacacc
ccggtcatcacggccccacccctgatcaatggcaccgcggaggtctacatcccccgcaac
tctggcataggctacctagtgactgttgtcaaggcagacgactacgacgaaggtgaaaat
ggtcgagtgacctatgacatgaccgaaggctaccgaggcttctttgaaatagatcacgtc
aatggcgaagtcagaaccactcgcacctttggtgagagctccaaggcttcctatgagctt
atcgtggtggcgcacgaccacggcaagacgtctctttctgcctctgcgctcgtcttaatc
tatctgtcccctgctctcgatgcccaagaatcaatgggctccgtgaacttgtccctgatt
ttcattattgccctaggctccattgccggtatcctctttgtcactatgatcttcgtggcc
atcaagtgcaagagagacaacaaagatatccggacctacaactgcagtaattgtttaacc
atcacttgtctcctcggctgttttataaaaggacaaaaaagcaagtgtctgcattgcatc
tcggtttctcctattagcgaggagcaagacaaaaaggcagaggagaaagtgagcctaagg
ggaaagagaatcgctgagtactcctatgggcatcaaaagaaatcaagcaagaagaaaaaa
atcagtaagaatgacatccgtctggttccccgggatgtggaggagacagacaagatgaac
gttgtcagctgctcctccctgacctcttccctcaactatttcgactaccatcagcagaca
ttgcccctgggctgccgccgctctgagagcactttcctgaatgtggagaaccagaatacc
cgcaacaccagcgccaaccacatctaccatcactctttcaacagccaggggccccagcag
cctgacctgatcatcaatggtgtgcctctgcctgagactgaaaactattcttttgactcc
aactacgtgaatagccgagcccatttaatcaaaagcagctccaccttcaaggatttagag
ggcaacagcctgaaggatagtggacatgaggagagtgaccagactgacagtgagcatgat
gtccagaggagcctgtattgtgatactgctgtcaatgatgtgctgaacaccagtgtgacc
tctatgggatctcagatgcctgagcatgatcagaatgaaggatttcattgcagggaagag
tgccggattcttggccactctgacaggtgctggatgccccggaatcccatgcccactcgt
tccaagtccccggagcatgtgagaaacatcattgcgctgtccattgaagctactgctgct
gatgttgaggcgtatgacgactgcggccccaccaaacggactttcgcaaccttcgggaaa
gatgttagcgaccacccggctgaggagaggcccatcctgaaaggcaagaggactgttgat
gtgaccatctgcagccccaaggtcaatagcgctatccgggaggctggcaatggctgtgag
gctattagccctgtcacctcccccctccacctcaagagccctctgccaaccaagccttct
gtgtcctacactgttgctctggctcccccggcccgtgatctggagcagtatgccaccaat
gtcaacaatggcccttctcgtccttctgaagctgagccccgtggagctgacagtgagaaa
gtcatgcacgaggtcaaccccattctgaaggagggtcgcgacaaagagtcccctgtcgtg
aagcgtctgaaggatatcattctctaa
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integrated database retrieval system